RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
VCX3A-201ENST00000381089 XCL1P47992 114 aa9.95□□□□□ -0.82
VCX3A-201ENST00000381089 ODF1Q14990 250 aa9.95□□□□□ -0.82
VCX3A-201ENST00000381089 I3L3M4 83 aa9.94□□□□□ -0.82
VCX3A-201ENST00000381089 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
VCX3A-201ENST00000381089 C20orf78Q9BR46 151 aa9.94□□□□□ -0.82
VCX3A-201ENST00000381089 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
VCX3A-201ENST00000381089 VCYO14598 125 aa9.93□□□□□ -0.82
VCX3A-201ENST00000381089 TSHBP01222 138 aa9.93□□□□□ -0.82
VCX3A-201ENST00000381089 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
VCX3A-201ENST00000381089 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
VCX3A-201ENST00000381089 MAP1LC3AQ9H492 121 aa9.93□□□□□ -0.82
VCX3A-201ENST00000381089 COLCA2A8K830 154 aa9.92□□□□□ -0.82
VCX3A-201ENST00000381089 CCL25O15444 150 aa9.92□□□□□ -0.82
VCX3A-201ENST00000381089 FCER1GP30273 86 aa9.92□□□□□ -0.82
VCX3A-201ENST00000381089 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
VCX3A-201ENST00000381089 SS18Q15532 418 aa9.92□□□□□ -0.82
VCX3A-201ENST00000381089 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
VCX3A-201ENST00000381089 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
VCX3A-201ENST00000381089 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
VCX3A-201ENST00000381089 RAB5AP20339 215 aa9.91□□□□□ -0.82
VCX3A-201ENST00000381089 ALKBH7Q9BT30 221 aaPredicted RBP9.91□□□□□ -0.82
VCX3A-201ENST00000381089 TCAPO15273 167 aa9.9□□□□□ -0.82
VCX3A-201ENST00000381089 LINC00526Q96FQ7 95 aa9.9□□□□□ -0.82
VCX3A-201ENST00000381089 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
VCX3A-201ENST00000381089 LOC107984640A0A0U1RRK4 108 aa9.89□□□□□ -0.83
VCX3A-201ENST00000381089 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
VCX3A-201ENST00000381089 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
VCX3A-201ENST00000381089 GAGE2BQ13066 116 aa9.89□□□□□ -0.83
VCX3A-201ENST00000381089 CD164L2Q6UWJ8 174 aa9.89□□□□□ -0.83
VCX3A-201ENST00000381089 TRGC2P03986 189 aa9.88□□□□□ -0.83
VCX3A-201ENST00000381089 MALP21145 153 aa9.87□□□□□ -0.83
VCX3A-201ENST00000381089 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
VCX3A-201ENST00000381089 Q8N8P6 123 aa9.87□□□□□ -0.83
VCX3A-201ENST00000381089 ZNF664Q8N3J9 261 aa9.86□□□□□ -0.83
VCX3A-201ENST00000381089 IGLV4-69A0A075B6H9 119 aa9.85□□□□□ -0.83
VCX3A-201ENST00000381089 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
VCX3A-201ENST00000381089 ESDP10768 282 aa9.85□□□□□ -0.83
VCX3A-201ENST00000381089 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
VCX3A-201ENST00000381089 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
VCX3A-201ENST00000381089 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
VCX3A-201ENST00000381089 CDC42SE2Q9NRR3 84 aa9.85□□□□□ -0.83
VCX3A-201ENST00000381089 COX7A2LO14548 114 aa9.84□□□□□ -0.83
VCX3A-201ENST00000381089 FA2HQ7L5A8 372 aa9.84□□□□□ -0.83
VCX3A-201ENST00000381089 C18orf32Q8TCD1 76 aa9.84□□□□□ -0.83
VCX3A-201ENST00000381089 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
VCX3A-201ENST00000381089 C1orf196B1AJZ1 125 aa9.83□□□□□ -0.84
VCX3A-201ENST00000381089 APOMO95445 188 aa9.83□□□□□ -0.84
VCX3A-201ENST00000381089 PSORS1C2Q9UIG4 136 aa9.83□□□□□ -0.84
VCX3A-201ENST00000381089 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
VCX3A-201ENST00000381089 A0A1W2PNN7 141 aa9.81□□□□□ -0.84
VCX3A-201ENST00000381089 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
VCX3A-201ENST00000381089 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
VCX3A-201ENST00000381089 C1orf137Q5JT78 98 aa9.81□□□□□ -0.84
VCX3A-201ENST00000381089 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
VCX3A-201ENST00000381089 TMEM18Q96B42 140 aa9.8□□□□□ -0.84
VCX3A-201ENST00000381089 C2orf48Q96LS8 159 aa9.8□□□□□ -0.84
VCX3A-201ENST00000381089 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
VCX3A-201ENST00000381089 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
VCX3A-201ENST00000381089 URB1-AS1Q96HZ7 61 aa9.79□□□□□ -0.84
VCX3A-201ENST00000381089 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
VCX3A-201ENST00000381089 LPAP08519 4548 aa9.79□□□□□ -0.84
VCX3A-201ENST00000381089 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
VCX3A-201ENST00000381089 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
VCX3A-201ENST00000381089 C2orf66Q6UXQ4 117 aa9.78□□□□□ -0.84
VCX3A-201ENST00000381089 Q6ZUT4 128 aa9.78□□□□□ -0.84
VCX3A-201ENST00000381089 CYSLTR1Q9Y271 337 aa9.78□□□□□ -0.84
VCX3A-201ENST00000381089 CSDC2Q9Y534 153 aaKnown RBP9.78□□□□□ -0.84
VCX3A-201ENST00000381089 K7EMI3 77 aa9.77□□□□□ -0.85
VCX3A-201ENST00000381089 LINC00614P0C842 121 aa9.77□□□□□ -0.85
VCX3A-201ENST00000381089 RAB5BP61020 215 aa9.77□□□□□ -0.85
VCX3A-201ENST00000381089 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
VCX3A-201ENST00000381089 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
VCX3A-201ENST00000381089 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
VCX3A-201ENST00000381089 SPAG11BQ08648 103 aa9.76□□□□□ -0.85
VCX3A-201ENST00000381089 RNF151Q2KHN1 245 aa9.76□□□□□ -0.85
VCX3A-201ENST00000381089 PHF5AQ7RTV0 110 aaKnown RBP9.76□□□□□ -0.85
VCX3A-201ENST00000381089 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
VCX3A-201ENST00000381089 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
VCX3A-201ENST00000381089 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 IGLV7-43P04211 117 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
VCX3A-201ENST00000381089 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 OR10D4PQ8NGN7 298 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
VCX3A-201ENST00000381089 A0A087WZ39 114 aa9.73□□□□□ -0.85
VCX3A-201ENST00000381089 F8WDY8 70 aa9.73□□□□□ -0.85
VCX3A-201ENST00000381089 SERF1AO75920 110 aa9.73□□□□□ -0.85
VCX3A-201ENST00000381089 TOMM6Q96B49 74 aa9.73□□□□□ -0.85
VCX3A-201ENST00000381089 CHCHD1Q96BP2 118 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms