RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
GABPB1-203ENST00000380877 A0A0B4J2C4 111 aa8.83□□□□□ -1
GABPB1-203ENST00000380877 PKIGQ9Y2B9 76 aa8.83□□□□□ -1
GABPB1-203ENST00000380877 LECT2O14960 151 aa8.83□□□□□ -1
GABPB1-203ENST00000380877 BEAN1Q3B7T3 259 aa8.83□□□□□ -1
GABPB1-203ENST00000380877 LELP1Q5T871 98 aa8.83□□□□□ -1
GABPB1-203ENST00000380877 TEN1Q86WV5 123 aa8.83□□□□□ -1
GABPB1-203ENST00000380877 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 UBE2D1P51668 147 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 HAMPP81172 84 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 CDC42SE2Q9NRR3 84 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 KLK9Q2XQG4 91 aa8.82□□□□□ -1
GABPB1-203ENST00000380877 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
GABPB1-203ENST00000380877 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
GABPB1-203ENST00000380877 C15orf53Q8NAA6 179 aa8.81□□□□□ -1
GABPB1-203ENST00000380877 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
GABPB1-203ENST00000380877 ATRQ13535 2644 aa8.81□□□□□ -1
GABPB1-203ENST00000380877 USP24Q9UPU5 2620 aa8.81□□□□□ -1
GABPB1-203ENST00000380877 FHL3Q13643 280 aa8.8□□□□□ -1
GABPB1-203ENST00000380877 RETNQ9HD89 108 aa8.8□□□□□ -1
GABPB1-203ENST00000380877 A0A0J9YWU9 116 aa8.8□□□□□ -1
GABPB1-203ENST00000380877 NANOS2P60321 138 aaKnown RBP8.79□□□□□ -1
GABPB1-203ENST00000380877 Q6ZSN1 163 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 DIRC1Q969H9 104 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 TRBV10-2A0A0K0K1G8 114 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 FHL2Q14192 279 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 RBMY1FQ15415 496 aaKnown RBP8.79□□□□□ -1
GABPB1-203ENST00000380877 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 H3BT86 120 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 TCL1BO95988 128 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 LINC00242Q5T6M2 205 aa8.79□□□□□ -1
GABPB1-203ENST00000380877 CDK2AP2O75956 126 aa8.78□□□□□ -1
GABPB1-203ENST00000380877 FAM19A4Q96LR4 140 aa8.78□□□□□ -1
GABPB1-203ENST00000380877 LAMA1P25391 3075 aa8.78□□□□□ -1
GABPB1-203ENST00000380877 MGAM2Q2M2H8 2515 aa8.78□□□□□ -1
GABPB1-203ENST00000380877 MUC4Q99102 2169 aa8.78□□□□□ -1
GABPB1-203ENST00000380877 PTH2Q96A98 100 aa8.78□□□□□ -1
GABPB1-203ENST00000380877 XAGE1AQ9HD64 81 aa8.77□□□□□ -1.01
GABPB1-203ENST00000380877 A0A096LNT2 108 aa8.77□□□□□ -1.01
GABPB1-203ENST00000380877 TIMM17BO60830 172 aa8.77□□□□□ -1.01
GABPB1-203ENST00000380877 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
GABPB1-203ENST00000380877 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1.01
GABPB1-203ENST00000380877 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
GABPB1-203ENST00000380877 RNF183Q96D59 192 aa8.76□□□□□ -1.01
GABPB1-203ENST00000380877 IGLV4-69A0A075B6H9 119 aa8.76□□□□□ -1.01
GABPB1-203ENST00000380877 C11orf72Q8NBR9 251 aa8.76□□□□□ -1.01
GABPB1-203ENST00000380877 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
GABPB1-203ENST00000380877 MAP1AP78559 2803 aaPredicted RBP8.75□□□□□ -1.01
GABPB1-203ENST00000380877 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 SPANXDQ9BXN6 97 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 FOXI1Q12951 378 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 ACYP1P07311 99 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 LINC00315P59091 139 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 Q6ZTC4 211 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 POM121L12Q8N7R1 296 aa8.74□□□□□ -1.01
GABPB1-203ENST00000380877 AMELXQ99217 191 aa8.73□□□□□ -1.01
GABPB1-203ENST00000380877 TRIAP1O43715 76 aa8.73□□□□□ -1.01
GABPB1-203ENST00000380877 CSDC2Q9Y534 153 aaKnown RBP8.73□□□□□ -1.01
GABPB1-203ENST00000380877 COX7BP24311 80 aa8.73□□□□□ -1.01
GABPB1-203ENST00000380877 SMIM1B2RUZ4 78 aa8.72□□□□□ -1.01
GABPB1-203ENST00000380877 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
GABPB1-203ENST00000380877 FUSP35637 526 aaKnown RBP eCLIP8.71□□□□□ -1.01
GABPB1-203ENST00000380877 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
GABPB1-203ENST00000380877 H3BQ85 93 aa8.71□□□□□ -1.02
GABPB1-203ENST00000380877 VCANP13611 3396 aa8.71□□□□□ -1.02
GABPB1-203ENST00000380877 UBE2AP49459 152 aa8.7□□□□□ -1.02
GABPB1-203ENST00000380877 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
GABPB1-203ENST00000380877 Q8IZM0 81 aa8.7□□□□□ -1.02
GABPB1-203ENST00000380877 TMEM256-PLSCR3K7ERE1 68 aa8.7□□□□□ -1.02
GABPB1-203ENST00000380877 MAST4O15021 2626 aa8.7□□□□□ -1.02
GABPB1-203ENST00000380877 COX6A2Q02221 97 aa8.7□□□□□ -1.02
GABPB1-203ENST00000380877 CITED1Q99966 193 aa8.69□□□□□ -1.02
GABPB1-203ENST00000380877 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-203ENST00000380877 A0A087WZ39 114 aa8.69□□□□□ -1.02
GABPB1-203ENST00000380877 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
GABPB1-203ENST00000380877 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
GABPB1-203ENST00000380877 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
GABPB1-203ENST00000380877 IGSF10Q6WRI0 2623 aa8.68□□□□□ -1.02
GABPB1-203ENST00000380877 CYSRT1A8MQ03 144 aa8.67□□□□□ -1.02
GABPB1-203ENST00000380877 COL6A3P12111 3177 aa8.67□□□□□ -1.02
GABPB1-203ENST00000380877 KRTAP24-1Q3LI83 254 aa8.66□□□□□ -1.02
GABPB1-203ENST00000380877 G3V4G9 280 aa8.66□□□□□ -1.02
GABPB1-203ENST00000380877 TRACP01848 142 aa8.66□□□□□ -1.02
GABPB1-203ENST00000380877 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
GABPB1-203ENST00000380877 A0A1B0GUV1 79 aa8.65□□□□□ -1.02
GABPB1-203ENST00000380877 UNQ6190/PRO20217Q6UXQ8 127 aa8.65□□□□□ -1.02
GABPB1-203ENST00000380877 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
GABPB1-203ENST00000380877 LINC01546A6NGU7 62 aa8.65□□□□□ -1.02
GABPB1-203ENST00000380877 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.03
GABPB1-203ENST00000380877 SLPIP03973 132 aa8.65□□□□□ -1.03
GABPB1-203ENST00000380877 IGKV3D-7A0A0C4DH55 119 aa8.64□□□□□ -1.03
GABPB1-203ENST00000380877 COX17Q14061 63 aa8.64□□□□□ -1.03
GABPB1-203ENST00000380877 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
GABPB1-203ENST00000380877 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
GABPB1-203ENST00000380877 Q9UF83 564 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 402.9 ms