RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ORMDL2Q53FV1 153 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 NOP10Q9NPE3 64 aaKnown RBP7.85□□□□□ -1.15
NEDD9-201ENST00000379433 RBM12B-AS1Q9P1G2 102 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 KIF25-AS1Q9Y6Z4 181 aa7.85□□□□□ -1.15
NEDD9-201ENST00000379433 DEFB4AO15263 64 aa7.84□□□□□ -1.15
NEDD9-201ENST00000379433 COX7CP15954 63 aa7.84□□□□□ -1.15
NEDD9-201ENST00000379433 TMEM170BQ5T4T1 132 aa7.84□□□□□ -1.15
NEDD9-201ENST00000379433 ZFP2Q6ZN57 461 aa7.84□□□□□ -1.15
NEDD9-201ENST00000379433 C11orf68Q9H3H3 251 aaKnown RBP7.83□□□□□ -1.16
NEDD9-201ENST00000379433 M0QY20 66 aa7.83□□□□□ -1.16
NEDD9-201ENST00000379433 ATP5G1P05496 136 aa7.83□□□□□ -1.16
NEDD9-201ENST00000379433 CRYGAP11844 174 aa7.83□□□□□ -1.16
NEDD9-201ENST00000379433 Q6ZTI0 123 aa7.83□□□□□ -1.16
NEDD9-201ENST00000379433 HIGD1BQ9P298 99 aa7.83□□□□□ -1.16
NEDD9-201ENST00000379433 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
NEDD9-201ENST00000379433 TRGV2A0A075B6R0 118 aa7.82□□□□□ -1.16
NEDD9-201ENST00000379433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-201ENST00000379433 PLAC8L1A1L4L8 177 aa7.82□□□□□ -1.16
NEDD9-201ENST00000379433 IGKV2-29A2NJV5 120 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-201ENST00000379433 SCGB1C2P0DMR2 95 aa7.82□□□□□ -1.16
NEDD9-201ENST00000379433 DEFB130BP0DP73 79 aa7.82□□□□□ -1.16
NEDD9-201ENST00000379433 DEFB130AP0DP74 79 aa7.82□□□□□ -1.16
NEDD9-201ENST00000379433 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
NEDD9-201ENST00000379433 IGKV3OR2-268A0A0C4DH90 116 aa7.81□□□□□ -1.16
NEDD9-201ENST00000379433 PSMB2P49721 201 aa7.81□□□□□ -1.16
NEDD9-201ENST00000379433 FXYD2P54710 66 aa7.81□□□□□ -1.16
NEDD9-201ENST00000379433 C1orf158Q8N1D5 194 aa7.81□□□□□ -1.16
NEDD9-201ENST00000379433 MGAM2Q2M2H8 2515 aa7.81□□□□□ -1.16
NEDD9-201ENST00000379433 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-201ENST00000379433 NPC2P61916 151 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 SFTA2Q6UW10 78 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 MAPKAPK5-AS1Q8N8E1 139 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 TOMM6Q96B49 74 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 MED14OSP0DP75 135 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 SS18Q15532 418 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 SCGB1D4Q6XE38 83 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 ODF3Q96PU9 254 aa7.8□□□□□ -1.16
NEDD9-201ENST00000379433 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
NEDD9-201ENST00000379433 POLR2KP53803 58 aaKnown RBP7.79□□□□□ -1.16
NEDD9-201ENST00000379433 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-201ENST00000379433 A0A096LPF7 62 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 LOC107984156A0A0G2JMH3 177 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 F8VRH5 84 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
NEDD9-201ENST00000379433 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 ARL17AQ8IVW1 177 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 PPP1R17O96001 155 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 TSHBP01222 138 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 C11orf86A6NJI1 115 aa7.78□□□□□ -1.16
NEDD9-201ENST00000379433 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 H3BT86 120 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 I3L3M4 83 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 NXPH4O95158 308 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 POM121L12Q8N7R1 296 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 TRBV25-1A0A075B6N4 114 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 IGLV1-51P01701 117 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 C11orf72Q8NBR9 251 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 HIST1H4GQ99525 98 aa7.77□□□□□ -1.17
NEDD9-201ENST00000379433 A0A0J9YXV3 536 aa7.76□□□□□ -1.17
NEDD9-201ENST00000379433 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
NEDD9-201ENST00000379433 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
NEDD9-201ENST00000379433 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
NEDD9-201ENST00000379433 ZNF815PA8K554 130 aa7.75□□□□□ -1.17
NEDD9-201ENST00000379433 CHAC1Q9BUX1 264 aa7.75□□□□□ -1.17
NEDD9-201ENST00000379433 PLNP26678 52 aa7.75□□□□□ -1.17
NEDD9-201ENST00000379433 DEFB135Q30KP9 77 aa7.75□□□□□ -1.17
NEDD9-201ENST00000379433 TRBV27A0A0K0K1C4 114 aa7.75□□□□□ -1.17
NEDD9-201ENST00000379433 TRGV4A0A0C4DH28 118 aa7.74□□□□□ -1.17
NEDD9-201ENST00000379433 HTN3P15516 51 aa7.74□□□□□ -1.17
NEDD9-201ENST00000379433 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-201ENST00000379433 SPANXDQ9BXN6 97 aa7.74□□□□□ -1.17
NEDD9-201ENST00000379433 CYSTM1Q9H1C7 97 aa7.74□□□□□ -1.17
NEDD9-201ENST00000379433 IGIPA6NJ69 53 aa7.73□□□□□ -1.17
NEDD9-201ENST00000379433 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
NEDD9-201ENST00000379433 C20orf203Q8NBC4 194 aa7.73□□□□□ -1.17
NEDD9-201ENST00000379433 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
NEDD9-201ENST00000379433 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
NEDD9-201ENST00000379433 TRAV8-3A0A0A6YYJ7 113 aa7.72□□□□□ -1.17
NEDD9-201ENST00000379433 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
NEDD9-201ENST00000379433 Q9H8V8 135 aa7.72□□□□□ -1.17
NEDD9-201ENST00000379433 NDUFA11Q86Y39 141 aa7.72□□□□□ -1.17
NEDD9-201ENST00000379433 TMEM263Q8WUH6 116 aaKnown RBP7.71□□□□□ -1.17
NEDD9-201ENST00000379433 ZNF625Q96I27 306 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-201ENST00000379433 A0A0J9YY99 117 aa7.71□□□□□ -1.18
NEDD9-201ENST00000379433 DAD1P61803 113 aa7.71□□□□□ -1.18
NEDD9-201ENST00000379433 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 IGLV4-3A0A075B6K6 122 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 H7C2G1 150 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 C19orf73Q9NVV2 129 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 Q6ZRU5 148 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 TSPEAR-AS2P59090 65 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 MDFIQ99750 246 aa7.7□□□□□ -1.18
NEDD9-201ENST00000379433 TRBV6-5A0A0K0K1A5 114 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 MYMXA0A1B0GTQ4 84 aa7.69□□□□□ -1.18
NEDD9-201ENST00000379433 RPL36AP83881 106 aaKnown RBP7.69□□□□□ -1.18
NEDD9-201ENST00000379433 RPL36ALQ969Q0 106 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms