RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 HIST1H2BCP62807 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST2H2BEQ16778 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BHQ93079 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BNQ99877 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 HIST1H2BMQ99879 126 aa10.84□□□□□ -0.67
PDLIM4-202ENST00000379018 K7EN84 100 aa10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 APOMO95445 188 aa10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 RNASE13Q5GAN3 156 aaKnown RBP10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 CDC42SE2Q9NRR3 84 aa10.83□□□□□ -0.68
PDLIM4-202ENST00000379018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
PDLIM4-202ENST00000379018 COX7A2LO14548 114 aa10.82□□□□□ -0.68
PDLIM4-202ENST00000379018 TRGC2P03986 189 aa10.82□□□□□ -0.68
PDLIM4-202ENST00000379018 ESDP10768 282 aa10.82□□□□□ -0.68
PDLIM4-202ENST00000379018 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
PDLIM4-202ENST00000379018 V9GYV3 84 aa10.82□□□□□ -0.68
PDLIM4-202ENST00000379018 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
PDLIM4-202ENST00000379018 CT83Q5H943 113 aa10.81□□□□□ -0.68
PDLIM4-202ENST00000379018 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
PDLIM4-202ENST00000379018 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
PDLIM4-202ENST00000379018 PRR4Q16378 134 aa10.8□□□□□ -0.68
PDLIM4-202ENST00000379018 C5orf38Q86SI9 138 aa10.8□□□□□ -0.68
PDLIM4-202ENST00000379018 A0A087WZ39 114 aa10.79□□□□□ -0.68
PDLIM4-202ENST00000379018 IGLV7-43P04211 117 aa10.79□□□□□ -0.68
PDLIM4-202ENST00000379018 TRBV6-5A0A0K0K1A5 114 aa10.78□□□□□ -0.68
PDLIM4-202ENST00000379018 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
PDLIM4-202ENST00000379018 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
PDLIM4-202ENST00000379018 GATCO43716 136 aaKnown RBP10.77□□□□□ -0.69
PDLIM4-202ENST00000379018 SPAG11BQ08648 103 aa10.77□□□□□ -0.69
PDLIM4-202ENST00000379018 GNB1LQ9BYB4 327 aa10.77□□□□□ -0.69
PDLIM4-202ENST00000379018 FAM168BA1KXE4 195 aa10.76□□□□□ -0.69
PDLIM4-202ENST00000379018 FCER1GP30273 86 aa10.76□□□□□ -0.69
PDLIM4-202ENST00000379018 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
PDLIM4-202ENST00000379018 KRTAP9-2Q9BYQ4 174 aa10.76□□□□□ -0.69
PDLIM4-202ENST00000379018 H0Y9J4 135 aa10.75□□□□□ -0.69
PDLIM4-202ENST00000379018 S100A12P80511 92 aa10.75□□□□□ -0.69
PDLIM4-202ENST00000379018 ATP5L2Q7Z4Y8 100 aa10.75□□□□□ -0.69
PDLIM4-202ENST00000379018 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
PDLIM4-202ENST00000379018 BORCS7Q96B45 105 aa10.75□□□□□ -0.69
PDLIM4-202ENST00000379018 C2orf48Q96LS8 159 aa10.75□□□□□ -0.69
PDLIM4-202ENST00000379018 SMKR1H3BMG3 65 aa10.74□□□□□ -0.69
PDLIM4-202ENST00000379018 UBE2D1P51668 147 aa10.74□□□□□ -0.69
PDLIM4-202ENST00000379018 KRTAP11-1Q8IUC1 163 aa10.74□□□□□ -0.69
PDLIM4-202ENST00000379018 AKR1D1P51857 326 aa10.73□□□□□ -0.69
PDLIM4-202ENST00000379018 POLR2KP53803 58 aaKnown RBP10.73□□□□□ -0.69
PDLIM4-202ENST00000379018 Q6ZUT4 128 aa10.73□□□□□ -0.69
PDLIM4-202ENST00000379018 TRBV27A0A0K0K1C4 114 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 IFITM10A6NMD0 228 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 A8MWL6 223 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 TSKUQ8WUA8 353 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 ORAOV1Q8WV07 137 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 PACRGQ96M98 296 aaPredicted RBP10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 C12orf57Q99622 126 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 UBE2D4Q9Y2X8 147 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 TRAPPC1Q9Y5R8 145 aa10.72□□□□□ -0.69
PDLIM4-202ENST00000379018 IGLV1-50A0A075B6I6 118 aa10.71□□□□□ -0.69
PDLIM4-202ENST00000379018 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
PDLIM4-202ENST00000379018 NDUFA6P56556 154 aa10.71□□□□□ -0.69
PDLIM4-202ENST00000379018 AMN1Q8IY45 258 aa10.71□□□□□ -0.69
PDLIM4-202ENST00000379018 MUC2Q02817 5179 aa10.7□□□□□ -0.7
PDLIM4-202ENST00000379018 S100A2P29034 98 aa10.7□□□□□ -0.7
PDLIM4-202ENST00000379018 UBE2BP63146 152 aa10.7□□□□□ -0.7
PDLIM4-202ENST00000379018 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
PDLIM4-202ENST00000379018 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
PDLIM4-202ENST00000379018 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
PDLIM4-202ENST00000379018 RAB4AP20338 218 aa10.69□□□□□ -0.7
PDLIM4-202ENST00000379018 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
PDLIM4-202ENST00000379018 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
PDLIM4-202ENST00000379018 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 HIGD1CA8MV81 97 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 VCYO14598 125 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 NDUFA1O15239 70 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 RNF151Q2KHN1 245 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 C10orf25Q5T742 122 aa10.68□□□□□ -0.7
PDLIM4-202ENST00000379018 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
PDLIM4-202ENST00000379018 TMEM136Q6ZRR5 245 aa10.67□□□□□ -0.7
PDLIM4-202ENST00000379018 OR10D4PQ8NGN7 298 aa10.67□□□□□ -0.7
PDLIM4-202ENST00000379018 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
PDLIM4-202ENST00000379018 HIST1H2BLQ99880 126 aa10.67□□□□□ -0.7
PDLIM4-202ENST00000379018 MRPL35Q9NZE8 188 aaKnown RBP10.67□□□□□ -0.7
PDLIM4-202ENST00000379018 M0QXV9 152 aa10.66□□□□□ -0.7
PDLIM4-202ENST00000379018 UNQ6190/PRO20217Q6UXQ8 127 aa10.66□□□□□ -0.7
PDLIM4-202ENST00000379018 MRPL18Q9H0U6 180 aaKnown RBP10.66□□□□□ -0.7
PDLIM4-202ENST00000379018 CSDC2Q9Y534 153 aaKnown RBP10.66□□□□□ -0.7
PDLIM4-202ENST00000379018 A0A1B0GW15 77 aa10.65□□□□□ -0.7
PDLIM4-202ENST00000379018 TSPAN13O95857 204 aa10.65□□□□□ -0.7
PDLIM4-202ENST00000379018 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
PDLIM4-202ENST00000379018 C6orf48Q9UBA6 75 aa10.65□□□□□ -0.7
PDLIM4-202ENST00000379018 RPL13AP40429 203 aaKnown RBP10.64□□□□□ -0.71
PDLIM4-202ENST00000379018 TMEM18Q96B42 140 aa10.64□□□□□ -0.71
PDLIM4-202ENST00000379018 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
PDLIM4-202ENST00000379018 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
PDLIM4-202ENST00000379018 NRACQ8N912 160 aa10.63□□□□□ -0.71
PDLIM4-202ENST00000379018 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
PDLIM4-202ENST00000379018 HBBP68871 147 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms