RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PCDH15Q96QU1 1955 aa8.83□□□□□ -1
PCDHA9-201ENST00000378122 COX7CP15954 63 aa8.83□□□□□ -1
PCDHA9-201ENST00000378122 V9GYY9 64 aa8.83□□□□□ -1
PCDHA9-201ENST00000378122 TRBV27A0A0K0K1C4 114 aa8.83□□□□□ -1
PCDHA9-201ENST00000378122 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
PCDHA9-201ENST00000378122 TIMM17BO60830 172 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 EBI3Q14213 229 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 USP17L23D6RBM5 183 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 C3orf84H3BNL1 204 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 SMIM11BQ8TCY0 68 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 URB1-AS1Q96HZ7 61 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 TRBV6-5A0A0K0K1A5 114 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 LYRM9A8MSI8 78 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 C6orf99Q4VX62 202 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 PYGO1Q9Y3Y4 419 aa8.82□□□□□ -1
PCDHA9-201ENST00000378122 C1orf134Q5TEV5 83 aa8.81□□□□□ -1
PCDHA9-201ENST00000378122 BBC3Q96PG8 261 aaPredicted RBP8.81□□□□□ -1
PCDHA9-201ENST00000378122 GOLGB1Q14789 3259 aaKnown RBP8.81□□□□□ -1
PCDHA9-201ENST00000378122 CDSNQ15517 529 aa8.81□□□□□ -1
PCDHA9-201ENST00000378122 MIFP14174 115 aa8.8□□□□□ -1
PCDHA9-201ENST00000378122 DOPEY1Q5JWR5 2465 aa8.8□□□□□ -1
PCDHA9-201ENST00000378122 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
PCDHA9-201ENST00000378122 C11orf71Q6IPW1 123 aa8.8□□□□□ -1
PCDHA9-201ENST00000378122 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
PCDHA9-201ENST00000378122 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
PCDHA9-201ENST00000378122 CCKP06307 115 aa8.79□□□□□ -1
PCDHA9-201ENST00000378122 COL5A1P20908 1838 aaPredicted RBP8.79□□□□□ -1
PCDHA9-201ENST00000378122 CCDC168Q8NDH2 2452 aa8.78□□□□□ -1
PCDHA9-201ENST00000378122 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
PCDHA9-201ENST00000378122 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
PCDHA9-201ENST00000378122 SMIM9A6NGZ8 99 aa8.78□□□□□ -1
PCDHA9-201ENST00000378122 M0QXV9 152 aa8.78□□□□□ -1
PCDHA9-201ENST00000378122 POM121L12Q8N7R1 296 aa8.78□□□□□ -1
PCDHA9-201ENST00000378122 NDUFC1O43677 76 aa8.77□□□□□ -1
PCDHA9-201ENST00000378122 FSTL3O95633 263 aa8.77□□□□□ -1
PCDHA9-201ENST00000378122 Q8N6K4 173 aa8.77□□□□□ -1.01
PCDHA9-201ENST00000378122 CRIP2P52943 208 aaPredicted RBP8.77□□□□□ -1.01
PCDHA9-201ENST00000378122 PRR4Q16378 134 aa8.77□□□□□ -1.01
PCDHA9-201ENST00000378122 ZNF702PQ9H963 129 aa8.76□□□□□ -1.01
PCDHA9-201ENST00000378122 EDN2P20800 178 aa8.76□□□□□ -1.01
PCDHA9-201ENST00000378122 Q6JHZ5 121 aa8.76□□□□□ -1.01
PCDHA9-201ENST00000378122 PLAC8L1A1L4L8 177 aa8.76□□□□□ -1.01
PCDHA9-201ENST00000378122 SPINK1P00995 79 aa8.75□□□□□ -1.01
PCDHA9-201ENST00000378122 KLLNB2CW77 178 aa8.75□□□□□ -1.01
PCDHA9-201ENST00000378122 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
PCDHA9-201ENST00000378122 CPAMD8Q8IZJ3 1885 aa8.75□□□□□ -1.01
PCDHA9-201ENST00000378122 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
PCDHA9-201ENST00000378122 HCFC1P51610 2035 aa8.74□□□□□ -1.01
PCDHA9-201ENST00000378122 IGLV4-69A0A075B6H9 119 aa8.74□□□□□ -1.01
PCDHA9-201ENST00000378122 Q6ZQY7 126 aa8.74□□□□□ -1.01
PCDHA9-201ENST00000378122 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
PCDHA9-201ENST00000378122 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 IGIPA6NJ69 53 aa8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 TTC28Q96AY4 2481 aa8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 Q6ZVQ6 151 aa8.73□□□□□ -1.01
PCDHA9-201ENST00000378122 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
PCDHA9-201ENST00000378122 TSPEAR-AS2P59090 65 aa8.72□□□□□ -1.01
PCDHA9-201ENST00000378122 LINC00337Q8N6G1 96 aa8.71□□□□□ -1.01
PCDHA9-201ENST00000378122 EML5Q05BV3 1969 aa8.71□□□□□ -1.01
PCDHA9-201ENST00000378122 COX6A2Q02221 97 aa8.71□□□□□ -1.02
PCDHA9-201ENST00000378122 SYCNQ0VAF6 134 aa8.71□□□□□ -1.02
PCDHA9-201ENST00000378122 PSMG3-AS1Q96PY0 264 aa8.71□□□□□ -1.02
PCDHA9-201ENST00000378122 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
PCDHA9-201ENST00000378122 A6NED7 52 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 M0R378 163 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 LRP4O75096 1905 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 A0A087WYN8 130 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
PCDHA9-201ENST00000378122 A0A087WVE0 104 aa8.69□□□□□ -1.02
PCDHA9-201ENST00000378122 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
PCDHA9-201ENST00000378122 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
PCDHA9-201ENST00000378122 COX17Q14061 63 aa8.68□□□□□ -1.02
PCDHA9-201ENST00000378122 SERP1Q9Y6X1 66 aa8.68□□□□□ -1.02
PCDHA9-201ENST00000378122 PRYO14603 147 aa8.68□□□□□ -1.02
PCDHA9-201ENST00000378122 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
PCDHA9-201ENST00000378122 DHRS4-AS1Q9P1J3 65 aa8.67□□□□□ -1.02
PCDHA9-201ENST00000378122 AVPP01185 164 aa8.67□□□□□ -1.02
PCDHA9-201ENST00000378122 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 ZNF73O43830 326 aaPredicted RBP8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 SMIM26A0A096LP01 95 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 K7ERS5 55 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 CELA1Q9UNI1 258 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 ACACBO00763 2458 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 Q6ZTC4 211 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 ZNF580Q9UK33 172 aa8.66□□□□□ -1.02
PCDHA9-201ENST00000378122 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
PCDHA9-201ENST00000378122 LELP1Q5T871 98 aa8.65□□□□□ -1.02
PCDHA9-201ENST00000378122 Q8N814 137 aa8.65□□□□□ -1.02
PCDHA9-201ENST00000378122 NHLRC4P0CG21 123 aaPredicted RBP8.65□□□□□ -1.02
PCDHA9-201ENST00000378122 Q8IZM0 81 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms