RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 IGKCP01834 107 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 HERVK_113P63121 156 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 ATOH7Q8N100 152 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 LINC00469Q8N7U9 141 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 RMI2Q96E14 147 aa8.68□□□□□ -1.02
CBWD3-203ENST00000377344 CD164L2Q6UWJ8 174 aa8.67□□□□□ -1.02
CBWD3-203ENST00000377344 FAM19A3Q7Z5A8 133 aa8.67□□□□□ -1.02
CBWD3-203ENST00000377344 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
CBWD3-203ENST00000377344 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-203ENST00000377344 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
CBWD3-203ENST00000377344 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
CBWD3-203ENST00000377344 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
CBWD3-203ENST00000377344 ALMS1Q8TCU4 4167 aa8.66□□□□□ -1.02
CBWD3-203ENST00000377344 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.02
CBWD3-203ENST00000377344 COX7A2LO14548 114 aa8.65□□□□□ -1.02
CBWD3-203ENST00000377344 MALP21145 153 aa8.65□□□□□ -1.02
CBWD3-203ENST00000377344 FOXI1Q12951 378 aa8.65□□□□□ -1.02
CBWD3-203ENST00000377344 PYY3Q5JQD4 70 aa8.65□□□□□ -1.02
CBWD3-203ENST00000377344 Q6ZR54 194 aa8.65□□□□□ -1.02
CBWD3-203ENST00000377344 LCE6AA0A183 80 aa8.64□□□□□ -1.03
CBWD3-203ENST00000377344 H3BRM9 83 aa8.64□□□□□ -1.03
CBWD3-203ENST00000377344 PSCAO43653 123 aa8.64□□□□□ -1.03
CBWD3-203ENST00000377344 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
CBWD3-203ENST00000377344 COX11Q9Y6N1 276 aa8.64□□□□□ -1.03
CBWD3-203ENST00000377344 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
CBWD3-203ENST00000377344 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
CBWD3-203ENST00000377344 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
CBWD3-203ENST00000377344 KMT2AQ03164 3969 aa8.63□□□□□ -1.03
CBWD3-203ENST00000377344 A0A087WZ39 114 aa8.62□□□□□ -1.03
CBWD3-203ENST00000377344 KRTAP26-1Q6PEX3 210 aa8.62□□□□□ -1.03
CBWD3-203ENST00000377344 C6orf223Q8N319 242 aa8.62□□□□□ -1.03
CBWD3-203ENST00000377344 STPG4Q8N801 248 aa8.62□□□□□ -1.03
CBWD3-203ENST00000377344 HYDINQ4G0P3 5121 aa8.62□□□□□ -1.03
CBWD3-203ENST00000377344 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
CBWD3-203ENST00000377344 C1orf134Q5TEV5 83 aa8.61□□□□□ -1.03
CBWD3-203ENST00000377344 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
CBWD3-203ENST00000377344 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
CBWD3-203ENST00000377344 HERVK_113P61574 105 aa8.61□□□□□ -1.03
CBWD3-203ENST00000377344 MAJINQ3KP22 176 aa8.61□□□□□ -1.03
CBWD3-203ENST00000377344 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
CBWD3-203ENST00000377344 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
CBWD3-203ENST00000377344 APOMO95445 188 aa8.59□□□□□ -1.03
CBWD3-203ENST00000377344 MAPKAPK5-AS1Q8N8E1 139 aa8.59□□□□□ -1.03
CBWD3-203ENST00000377344 TOMM7Q9P0U1 55 aa8.59□□□□□ -1.03
CBWD3-203ENST00000377344 LECT2O14960 151 aa8.59□□□□□ -1.03
CBWD3-203ENST00000377344 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
CBWD3-203ENST00000377344 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-203ENST00000377344 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
CBWD3-203ENST00000377344 IGHV1-58A0A0C4DH39 117 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 SMIM6P0DI80 62 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 CFAP161Q6P656 301 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 PAM16Q9Y3D7 125 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 USP17L23D6RBM5 183 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 PRSS2P07478 247 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 NMUP48645 174 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
CBWD3-203ENST00000377344 DNAH10Q8IVF4 4471 aa8.56□□□□□ -1.04
CBWD3-203ENST00000377344 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
CBWD3-203ENST00000377344 E9PLD3 99 aa8.56□□□□□ -1.04
CBWD3-203ENST00000377344 S100A12P80511 92 aa8.56□□□□□ -1.04
CBWD3-203ENST00000377344 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
CBWD3-203ENST00000377344 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
CBWD3-203ENST00000377344 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 LEPROTO15243 131 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 SPATA45Q537H7 98 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 DNAH6Q9C0G6 4158 aa8.55□□□□□ -1.04
CBWD3-203ENST00000377344 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
CBWD3-203ENST00000377344 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
CBWD3-203ENST00000377344 WFDC2Q14508 124 aa8.54□□□□□ -1.04
CBWD3-203ENST00000377344 J3QQQ9 107 aa8.54□□□□□ -1.04
CBWD3-203ENST00000377344 LGALS3P17931 250 aaKnown RBP8.54□□□□□ -1.04
CBWD3-203ENST00000377344 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
CBWD3-203ENST00000377344 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
CBWD3-203ENST00000377344 Q8IZM0 81 aa8.53□□□□□ -1.04
CBWD3-203ENST00000377344 C12orf57Q99622 126 aa8.53□□□□□ -1.04
CBWD3-203ENST00000377344 CKS1BP61024 79 aa8.52□□□□□ -1.04
CBWD3-203ENST00000377344 DNAH2Q9P225 4427 aa8.52□□□□□ -1.05
CBWD3-203ENST00000377344 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
CBWD3-203ENST00000377344 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
CBWD3-203ENST00000377344 RTL8CO15255 209 aa8.52□□□□□ -1.05
CBWD3-203ENST00000377344 KIAA0087Q14695 138 aa8.52□□□□□ -1.05
CBWD3-203ENST00000377344 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
CBWD3-203ENST00000377344 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
CBWD3-203ENST00000377344 RYR2Q92736 4967 aa8.51□□□□□ -1.05
CBWD3-203ENST00000377344 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
CBWD3-203ENST00000377344 C14orf177Q52M58 125 aa8.5□□□□□ -1.05
CBWD3-203ENST00000377344 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
CBWD3-203ENST00000377344 CAMK2N2Q96S95 79 aa8.5□□□□□ -1.05
CBWD3-203ENST00000377344 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms