RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
CLSTN1-202ENST00000377298 COL4A2P08572 1712 aa13□□□□□ -0.33
CLSTN1-202ENST00000377298 ADAMTS20P59510 1910 aa12.99□□□□□ -0.33
CLSTN1-202ENST00000377298 IGKV3D-7A0A0C4DH55 119 aa12.99□□□□□ -0.33
CLSTN1-202ENST00000377298 CHKB-CPT1BH3BT56 60 aa12.99□□□□□ -0.33
CLSTN1-202ENST00000377298 EXPH5Q8NEV8 1989 aa12.99□□□□□ -0.33
CLSTN1-202ENST00000377298 MT-ATP8P03928 68 aa12.98□□□□□ -0.33
CLSTN1-202ENST00000377298 ATOX1O00244 68 aa12.98□□□□□ -0.33
CLSTN1-202ENST00000377298 ZNF462Q96JM2 2506 aa12.98□□□□□ -0.33
CLSTN1-202ENST00000377298 COX8CQ7Z4L0 72 aa12.98□□□□□ -0.33
CLSTN1-202ENST00000377298 CENPFP49454 3210 aa12.98□□□□□ -0.33
CLSTN1-202ENST00000377298 GAS8-AS1O95177 125 aa12.97□□□□□ -0.33
CLSTN1-202ENST00000377298 UBE2D1P51668 147 aa12.97□□□□□ -0.33
CLSTN1-202ENST00000377298 EML5Q05BV3 1969 aa12.97□□□□□ -0.33
CLSTN1-202ENST00000377298 IGLV4-69A0A075B6H9 119 aa12.97□□□□□ -0.33
CLSTN1-202ENST00000377298 C1orf158Q8N1D5 194 aa12.96□□□□□ -0.33
CLSTN1-202ENST00000377298 CDC42SE2Q9NRR3 84 aa12.96□□□□□ -0.33
CLSTN1-202ENST00000377298 NUPR2A6NF83 97 aa12.96□□□□□ -0.34
CLSTN1-202ENST00000377298 CHCHD7Q9BUK0 85 aa12.95□□□□□ -0.34
CLSTN1-202ENST00000377298 URB1-AS1Q96HZ7 61 aa12.95□□□□□ -0.34
CLSTN1-202ENST00000377298 LRRK2Q5S007 2527 aa12.95□□□□□ -0.34
CLSTN1-202ENST00000377298 C14orf132Q9NPU4 83 aa12.94□□□□□ -0.34
CLSTN1-202ENST00000377298 A8MZ25 164 aa12.93□□□□□ -0.34
CLSTN1-202ENST00000377298 MUC7Q8TAX7 377 aa12.92□□□□□ -0.34
CLSTN1-202ENST00000377298 FN1P02751 2386 aaKnown RBP12.92□□□□□ -0.34
CLSTN1-202ENST00000377298 TEX49A0A1B0GTD5 131 aa12.92□□□□□ -0.34
CLSTN1-202ENST00000377298 TRBV30A0A0K0K1B3 111 aa12.92□□□□□ -0.34
CLSTN1-202ENST00000377298 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
CLSTN1-202ENST00000377298 C6orf99Q4VX62 202 aa12.91□□□□□ -0.34
CLSTN1-202ENST00000377298 Q8N2B8 174 aa12.91□□□□□ -0.34
CLSTN1-202ENST00000377298 Q8IZM0 81 aa12.91□□□□□ -0.34
CLSTN1-202ENST00000377298 NDUFV3P56181 108 aaKnown RBP12.91□□□□□ -0.34
CLSTN1-202ENST00000377298 LINC00643Q86TS7 51 aa12.91□□□□□ -0.34
CLSTN1-202ENST00000377298 COX17Q14061 63 aa12.9□□□□□ -0.34
CLSTN1-202ENST00000377298 RETNQ9HD89 108 aa12.9□□□□□ -0.34
CLSTN1-202ENST00000377298 TRAV23DV6A0A075B6W5 121 aa12.9□□□□□ -0.34
CLSTN1-202ENST00000377298 M0R378 163 aa12.9□□□□□ -0.34
CLSTN1-202ENST00000377298 LINC00526Q96FQ7 95 aa12.9□□□□□ -0.34
CLSTN1-202ENST00000377298 LOC107984640A0A0U1RRK4 108 aa12.9□□□□□ -0.34
CLSTN1-202ENST00000377298 TRIAP1O43715 76 aa12.89□□□□□ -0.35
CLSTN1-202ENST00000377298 BEAN1Q3B7T3 259 aa12.87□□□□□ -0.35
CLSTN1-202ENST00000377298 FHL2Q14192 279 aa12.87□□□□□ -0.35
CLSTN1-202ENST00000377298 J3KT08 172 aa12.86□□□□□ -0.35
CLSTN1-202ENST00000377298 BPY2O14599 106 aa12.86□□□□□ -0.35
CLSTN1-202ENST00000377298 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
CLSTN1-202ENST00000377298 ZNF706Q9Y5V0 76 aaPredicted RBP12.85□□□□□ -0.35
CLSTN1-202ENST00000377298 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
CLSTN1-202ENST00000377298 IGKV2-28A0A075B6P5 120 aa12.85□□□□□ -0.35
CLSTN1-202ENST00000377298 IGKV2D-28P01615 120 aa12.85□□□□□ -0.35
CLSTN1-202ENST00000377298 WFDC9Q8NEX5 89 aa12.85□□□□□ -0.35
CLSTN1-202ENST00000377298 LINC00474Q9P2X8 69 aa12.85□□□□□ -0.35
CLSTN1-202ENST00000377298 Q6ZTC4 211 aa12.84□□□□□ -0.35
CLSTN1-202ENST00000377298 SLPIP03973 132 aa12.84□□□□□ -0.35
CLSTN1-202ENST00000377298 FASNP49327 2511 aaKnown RBP12.84□□□□□ -0.35
CLSTN1-202ENST00000377298 DHRS4-AS1Q9P1J3 65 aa12.84□□□□□ -0.35
CLSTN1-202ENST00000377298 CYSRT1A8MQ03 144 aa12.83□□□□□ -0.36
CLSTN1-202ENST00000377298 TMEM258P61165 79 aa12.83□□□□□ -0.36
CLSTN1-202ENST00000377298 IGKV4-1P06312 121 aa12.83□□□□□ -0.36
CLSTN1-202ENST00000377298 CSDC2Q9Y534 153 aaKnown RBP12.82□□□□□ -0.36
CLSTN1-202ENST00000377298 POM121L12Q8N7R1 296 aa12.8□□□□□ -0.36
CLSTN1-202ENST00000377298 PPDPFQ9H3Y8 114 aa12.8□□□□□ -0.36
CLSTN1-202ENST00000377298 EGFEM1PQ0D2K5 195 aa12.8□□□□□ -0.36
CLSTN1-202ENST00000377298 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
CLSTN1-202ENST00000377298 Q6ZQY7 126 aa12.78□□□□□ -0.36
CLSTN1-202ENST00000377298 UPK3BQ9BT76 320 aa12.78□□□□□ -0.36
CLSTN1-202ENST00000377298 IGLV4-60A0A075B6I1 120 aa12.77□□□□□ -0.36
CLSTN1-202ENST00000377298 LINC00694P0DN24 101 aa12.76□□□□□ -0.37
CLSTN1-202ENST00000377298 C5orf47Q569G3 176 aa12.76□□□□□ -0.37
CLSTN1-202ENST00000377298 ZNF73O43830 326 aaPredicted RBP12.76□□□□□ -0.37
CLSTN1-202ENST00000377298 UNQ6190/PRO20217Q6UXQ8 127 aa12.76□□□□□ -0.37
CLSTN1-202ENST00000377298 ATP5EP2Q5VTU8 51 aa12.76□□□□□ -0.37
CLSTN1-202ENST00000377298 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
CLSTN1-202ENST00000377298 UQCRQO14949 82 aa12.75□□□□□ -0.37
CLSTN1-202ENST00000377298 AMELXQ99217 191 aa12.75□□□□□ -0.37
CLSTN1-202ENST00000377298 CCKP06307 115 aa12.75□□□□□ -0.37
CLSTN1-202ENST00000377298 XGP55808 180 aa12.75□□□□□ -0.37
CLSTN1-202ENST00000377298 PLAC8L1A1L4L8 177 aa12.75□□□□□ -0.37
CLSTN1-202ENST00000377298 LST1O00453 97 aa12.75□□□□□ -0.37
CLSTN1-202ENST00000377298 A0A1B0GUV1 79 aa12.74□□□□□ -0.37
CLSTN1-202ENST00000377298 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
CLSTN1-202ENST00000377298 SPINK6Q6UWN8 80 aa12.74□□□□□ -0.37
CLSTN1-202ENST00000377298 A0A096LNJ9 63 aa12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 MTORP42345 2549 aa12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 SEC61GP60059 68 aa12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 Q6ZSN1 163 aa12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 PKD1L2Q7Z442 2459 aa12.73□□□□□ -0.37
CLSTN1-202ENST00000377298 SDIM1Q6ZPB5 146 aa12.72□□□□□ -0.37
CLSTN1-202ENST00000377298 IGLV5-52A0A0A0MRZ9 124 aa12.71□□□□□ -0.38
CLSTN1-202ENST00000377298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.71□□□□□ -0.38
CLSTN1-202ENST00000377298 COX6A2Q02221 97 aa12.71□□□□□ -0.38
CLSTN1-202ENST00000377298 FHL3Q13643 280 aa12.7□□□□□ -0.38
CLSTN1-202ENST00000377298 LYPD5Q6UWN5 251 aa12.7□□□□□ -0.38
CLSTN1-202ENST00000377298 F8WDY8 70 aa12.7□□□□□ -0.38
CLSTN1-202ENST00000377298 C3orf22Q8N5N4 141 aa12.69□□□□□ -0.38
CLSTN1-202ENST00000377298 USP17L23D6RBM5 183 aa12.68□□□□□ -0.38
CLSTN1-202ENST00000377298 C1orf134Q5TEV5 83 aa12.68□□□□□ -0.38
CLSTN1-202ENST00000377298 HRCT1Q6UXD1 115 aa12.68□□□□□ -0.38
CLSTN1-202ENST00000377298 C11orf72Q8NBR9 251 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms