RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 DHRS4-AS1Q9P1J3 65 aa9.9□□□□□ -0.83
GPC6-201ENST00000377047 CCKP06307 115 aa9.89□□□□□ -0.83
GPC6-201ENST00000377047 CCDC168Q8NDH2 2452 aa9.89□□□□□ -0.83
GPC6-201ENST00000377047 TEX49A0A1B0GTD5 131 aa9.89□□□□□ -0.83
GPC6-201ENST00000377047 MRPS36P82909 103 aaKnown RBP9.89□□□□□ -0.83
GPC6-201ENST00000377047 COL5A1P20908 1838 aaPredicted RBP9.89□□□□□ -0.83
GPC6-201ENST00000377047 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
GPC6-201ENST00000377047 PLXNB1O43157 2135 aa9.88□□□□□ -0.83
GPC6-201ENST00000377047 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
GPC6-201ENST00000377047 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
GPC6-201ENST00000377047 Q6ZTC4 211 aa9.88□□□□□ -0.83
GPC6-201ENST00000377047 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
GPC6-201ENST00000377047 POLR2KP53803 58 aaKnown RBP9.87□□□□□ -0.83
GPC6-201ENST00000377047 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
GPC6-201ENST00000377047 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
GPC6-201ENST00000377047 Q6ZQY7 126 aa9.86□□□□□ -0.83
GPC6-201ENST00000377047 CRIP2P52943 208 aaPredicted RBP9.86□□□□□ -0.83
GPC6-201ENST00000377047 ATG2AQ2TAZ0 1938 aa9.86□□□□□ -0.83
GPC6-201ENST00000377047 ENHOQ6UWT2 76 aa9.86□□□□□ -0.83
GPC6-201ENST00000377047 PIEZO2Q9H5I5 2752 aa9.85□□□□□ -0.83
GPC6-201ENST00000377047 IGLV5-52A0A0A0MRZ9 124 aa9.85□□□□□ -0.83
GPC6-201ENST00000377047 TIMM17BO60830 172 aa9.85□□□□□ -0.83
GPC6-201ENST00000377047 COX17Q14061 63 aa9.85□□□□□ -0.83
GPC6-201ENST00000377047 Q8IZM0 81 aa9.84□□□□□ -0.83
GPC6-201ENST00000377047 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
GPC6-201ENST00000377047 PIEZO1Q92508 2521 aa9.84□□□□□ -0.83
GPC6-201ENST00000377047 G3V4G9 280 aa9.84□□□□□ -0.83
GPC6-201ENST00000377047 M0QXV9 152 aa9.83□□□□□ -0.84
GPC6-201ENST00000377047 SMIM11BQ8TCY0 68 aa9.83□□□□□ -0.84
GPC6-201ENST00000377047 ZNF73O43830 326 aaPredicted RBP9.83□□□□□ -0.84
GPC6-201ENST00000377047 ABCA2Q9BZC7 2435 aa9.82□□□□□ -0.84
GPC6-201ENST00000377047 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
GPC6-201ENST00000377047 RNASE8Q8TDE3 154 aaKnown RBP9.82□□□□□ -0.84
GPC6-201ENST00000377047 ADAMTS20P59510 1910 aa9.82□□□□□ -0.84
GPC6-201ENST00000377047 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
GPC6-201ENST00000377047 EP400Q96L91 3159 aa9.81□□□□□ -0.84
GPC6-201ENST00000377047 FHL2Q14192 279 aa9.81□□□□□ -0.84
GPC6-201ENST00000377047 CPAMD8Q8IZJ3 1885 aa9.81□□□□□ -0.84
GPC6-201ENST00000377047 C6orf223Q8N319 242 aa9.8□□□□□ -0.84
GPC6-201ENST00000377047 C9orf116Q5BN46 136 aaPredicted RBP9.79□□□□□ -0.84
GPC6-201ENST00000377047 WFDC13Q8IUB5 93 aa9.79□□□□□ -0.84
GPC6-201ENST00000377047 RPL28P46779 137 aaKnown RBP9.79□□□□□ -0.84
GPC6-201ENST00000377047 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
GPC6-201ENST00000377047 EXPH5Q8NEV8 1989 aa9.79□□□□□ -0.84
GPC6-201ENST00000377047 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
GPC6-201ENST00000377047 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
GPC6-201ENST00000377047 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
GPC6-201ENST00000377047 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
GPC6-201ENST00000377047 C1orf134Q5TEV5 83 aa9.78□□□□□ -0.84
GPC6-201ENST00000377047 C10orf25Q5T742 122 aa9.77□□□□□ -0.84
GPC6-201ENST00000377047 C20orf197Q8N268 126 aa9.77□□□□□ -0.84
GPC6-201ENST00000377047 CNFNQ9BYD5 112 aa9.77□□□□□ -0.84
GPC6-201ENST00000377047 EGFEM1PQ0D2K5 195 aa9.77□□□□□ -0.85
GPC6-201ENST00000377047 J3KT08 172 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 MYO18BQ8IUG5 2567 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 COX6A2Q02221 97 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 ZNF580Q9UK33 172 aa9.76□□□□□ -0.85
GPC6-201ENST00000377047 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
GPC6-201ENST00000377047 REG3GQ6UW15 175 aa9.75□□□□□ -0.85
GPC6-201ENST00000377047 SRCAPQ6ZRS2 3230 aa9.75□□□□□ -0.85
GPC6-201ENST00000377047 MUC7Q8TAX7 377 aa9.75□□□□□ -0.85
GPC6-201ENST00000377047 NDUFC2O95298 119 aa9.75□□□□□ -0.85
GPC6-201ENST00000377047 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.74□□□□□ -0.85
GPC6-201ENST00000377047 MT-ATP8P03928 68 aa9.74□□□□□ -0.85
GPC6-201ENST00000377047 LINC01556Q5JQF7 62 aa9.73□□□□□ -0.85
GPC6-201ENST00000377047 NDUFV3P56181 108 aaKnown RBP9.73□□□□□ -0.85
GPC6-201ENST00000377047 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
GPC6-201ENST00000377047 NHLRC4P0CG21 123 aaPredicted RBP9.72□□□□□ -0.85
GPC6-201ENST00000377047 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
GPC6-201ENST00000377047 LST1O00453 97 aa9.72□□□□□ -0.85
GPC6-201ENST00000377047 C1orf137Q5JT78 98 aa9.72□□□□□ -0.85
GPC6-201ENST00000377047 TRBV10-3A0A0K0K1G6 114 aa9.72□□□□□ -0.85
GPC6-201ENST00000377047 Q6ZSN1 163 aa9.72□□□□□ -0.85
GPC6-201ENST00000377047 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
GPC6-201ENST00000377047 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
GPC6-201ENST00000377047 FHL3Q13643 280 aa9.7□□□□□ -0.86
GPC6-201ENST00000377047 MPLKIPQ8TAP9 179 aa9.7□□□□□ -0.86
GPC6-201ENST00000377047 FSHBP01225 129 aa9.7□□□□□ -0.86
GPC6-201ENST00000377047 BEAN1Q3B7T3 259 aa9.68□□□□□ -0.86
GPC6-201ENST00000377047 EML5Q05BV3 1969 aa9.68□□□□□ -0.86
GPC6-201ENST00000377047 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
GPC6-201ENST00000377047 K7ERS5 55 aa9.67□□□□□ -0.86
GPC6-201ENST00000377047 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
GPC6-201ENST00000377047 FAM30AQ9NZY2 134 aa9.66□□□□□ -0.86
GPC6-201ENST00000377047 SPTSSBQ8NFR3 76 aa9.66□□□□□ -0.86
GPC6-201ENST00000377047 NDUFC2-KCTD14E9PQ53 114 aa9.66□□□□□ -0.86
GPC6-201ENST00000377047 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
GPC6-201ENST00000377047 UQCRQO14949 82 aa9.66□□□□□ -0.86
GPC6-201ENST00000377047 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
GPC6-201ENST00000377047 BRK1Q8WUW1 75 aa9.65□□□□□ -0.86
GPC6-201ENST00000377047 MRPL55Q7Z7F7 128 aaKnown RBP9.65□□□□□ -0.86
GPC6-201ENST00000377047 SVIPQ8NHG7 77 aa9.65□□□□□ -0.86
GPC6-201ENST00000377047 SNURFQ9Y675 71 aa9.65□□□□□ -0.86
GPC6-201ENST00000377047 Q8N2B8 174 aa9.64□□□□□ -0.87
GPC6-201ENST00000377047 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
GPC6-201ENST00000377047 Q8N814 137 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms