RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
CLCN6-206ENST00000376496 LINC00269Q8N2A0 174 aa8.66□□□□□ -1.02
CLCN6-206ENST00000376496 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-206ENST00000376496 SPATA25Q9BR10 227 aa8.66□□□□□ -1.02
CLCN6-206ENST00000376496 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
CLCN6-206ENST00000376496 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
CLCN6-206ENST00000376496 DEFB131BA0A096LNP1 70 aa8.65□□□□□ -1.02
CLCN6-206ENST00000376496 TEX48A0A1B0GUV7 120 aa8.65□□□□□ -1.02
CLCN6-206ENST00000376496 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLCN6-206ENST00000376496 SMIM1B2RUZ4 78 aa8.65□□□□□ -1.03
CLCN6-206ENST00000376496 XCL1P47992 114 aa8.65□□□□□ -1.03
CLCN6-206ENST00000376496 C5orf38Q86SI9 138 aa8.65□□□□□ -1.03
CLCN6-206ENST00000376496 NHP2Q9NX24 153 aaKnown RBP8.65□□□□□ -1.03
CLCN6-206ENST00000376496 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
CLCN6-206ENST00000376496 H3BRM9 83 aa8.64□□□□□ -1.03
CLCN6-206ENST00000376496 ANGP03950 147 aaKnown RBP8.64□□□□□ -1.03
CLCN6-206ENST00000376496 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
CLCN6-206ENST00000376496 NDUFA12Q9UI09 145 aa8.64□□□□□ -1.03
CLCN6-206ENST00000376496 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
CLCN6-206ENST00000376496 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 LURAP1LQ8IV03 231 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 CCL25O15444 150 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 IGHV3-33P01772 117 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 NPC2P61916 151 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 SEC11AP67812 179 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 FAM19A3Q7Z5A8 133 aa8.63□□□□□ -1.03
CLCN6-206ENST00000376496 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 DAND5Q8N907 189 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 TM2D2Q9BX73 214 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 TOMM7Q9P0U1 55 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 COX11Q9Y6N1 276 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 A0A1B0GUV1 79 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 LELP1Q5T871 98 aa8.62□□□□□ -1.03
CLCN6-206ENST00000376496 ADAMTSL4-AS1Q5T5F5 129 aa8.61□□□□□ -1.03
CLCN6-206ENST00000376496 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
CLCN6-206ENST00000376496 A6NDN8 102 aa8.61□□□□□ -1.03
CLCN6-206ENST00000376496 Q9H8V8 135 aa8.61□□□□□ -1.03
CLCN6-206ENST00000376496 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
CLCN6-206ENST00000376496 ESRGQ1W209 222 aa8.6□□□□□ -1.03
CLCN6-206ENST00000376496 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
CLCN6-206ENST00000376496 KLK12Q9UKR0 248 aa8.6□□□□□ -1.03
CLCN6-206ENST00000376496 DNHD1Q96M86 4753 aa8.6□□□□□ -1.03
CLCN6-206ENST00000376496 REG3AQ06141 175 aa8.6□□□□□ -1.03
CLCN6-206ENST00000376496 TAL2Q16559 108 aa8.59□□□□□ -1.03
CLCN6-206ENST00000376496 H3BUT2 72 aa8.59□□□□□ -1.03
CLCN6-206ENST00000376496 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
CLCN6-206ENST00000376496 LITAFQ99732 161 aa8.59□□□□□ -1.03
CLCN6-206ENST00000376496 PRSS2P07478 247 aa8.58□□□□□ -1.04
CLCN6-206ENST00000376496 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
CLCN6-206ENST00000376496 SS18Q15532 418 aa8.58□□□□□ -1.04
CLCN6-206ENST00000376496 APOMO95445 188 aa8.58□□□□□ -1.04
CLCN6-206ENST00000376496 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
CLCN6-206ENST00000376496 SH2D6Q7Z4S9 175 aa8.57□□□□□ -1.04
CLCN6-206ENST00000376496 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
CLCN6-206ENST00000376496 VAMP3Q15836 100 aa8.57□□□□□ -1.04
CLCN6-206ENST00000376496 NDUFA1O15239 70 aa8.57□□□□□ -1.04
CLCN6-206ENST00000376496 SFTA2Q6UW10 78 aa8.56□□□□□ -1.04
CLCN6-206ENST00000376496 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
CLCN6-206ENST00000376496 DNAH9Q9NYC9 4486 aa8.56□□□□□ -1.04
CLCN6-206ENST00000376496 A0A087WZ39 114 aa8.56□□□□□ -1.04
CLCN6-206ENST00000376496 H3BNG1 76 aa8.56□□□□□ -1.04
CLCN6-206ENST00000376496 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
CLCN6-206ENST00000376496 ENHOQ6UWT2 76 aa8.55□□□□□ -1.04
CLCN6-206ENST00000376496 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
CLCN6-206ENST00000376496 A4D1N5 150 aa8.55□□□□□ -1.04
CLCN6-206ENST00000376496 C9orf118A6NHY6 69 aa8.55□□□□□ -1.04
CLCN6-206ENST00000376496 IGLL5B9A064 214 aa8.55□□□□□ -1.04
CLCN6-206ENST00000376496 TMEM238C9JI98 176 aa8.55□□□□□ -1.04
CLCN6-206ENST00000376496 TRAV10A0A0B4J240 114 aa8.54□□□□□ -1.04
CLCN6-206ENST00000376496 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
CLCN6-206ENST00000376496 LINC00526Q96FQ7 95 aa8.54□□□□□ -1.04
CLCN6-206ENST00000376496 C2orf82Q6UX34 121 aa8.53□□□□□ -1.04
CLCN6-206ENST00000376496 GAGE12HA6NDE8 117 aa8.53□□□□□ -1.04
CLCN6-206ENST00000376496 CFC1BP0CG36 223 aa8.53□□□□□ -1.04
CLCN6-206ENST00000376496 CFC1P0CG37 223 aa8.53□□□□□ -1.04
CLCN6-206ENST00000376496 MEGF8Q7Z7M0 2845 aa8.52□□□□□ -1.04
CLCN6-206ENST00000376496 CD164L2Q6UWJ8 174 aa8.52□□□□□ -1.05
CLCN6-206ENST00000376496 H7C2G1 150 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 FOXI1Q12951 378 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 MIAQ16674 131 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 COX7A2LO14548 114 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 B9D2Q9BPU9 175 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
CLCN6-206ENST00000376496 A0A1B0GWB2 263 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 MALP21145 153 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 PRR34Q9NV39 138 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 TMEM238LA0A1B0GVL6 79 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 A6NJY4 79 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 CRPP02741 224 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 PFN2P35080 140 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
CLCN6-206ENST00000376496 PRKDCP78527 4128 aaKnown RBP8.49□□□□□ -1.05
CLCN6-206ENST00000376496 C6orf223Q8N319 242 aa8.49□□□□□ -1.05
CLCN6-206ENST00000376496 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 1095 ms