RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
CLCNKA-202ENST00000375692 RS1O15537 224 aa10.11□□□□□ -0.79
CLCNKA-202ENST00000375692 BEAN1Q3B7T3 259 aa10.11□□□□□ -0.79
CLCNKA-202ENST00000375692 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
CLCNKA-202ENST00000375692 DNAJC9-AS1A6NH13 148 aa10.11□□□□□ -0.79
CLCNKA-202ENST00000375692 PIK3CD-AS1Q5SR53 167 aa10.11□□□□□ -0.79
CLCNKA-202ENST00000375692 NSD1Q96L73 2696 aaPredicted RBP10.1□□□□□ -0.79
CLCNKA-202ENST00000375692 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
CLCNKA-202ENST00000375692 SMIM1B2RUZ4 78 aa10.1□□□□□ -0.79
CLCNKA-202ENST00000375692 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
CLCNKA-202ENST00000375692 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 COX7A2LO14548 114 aa10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 HERVK_113P63121 156 aa10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 PRIMA1Q86XR5 153 aa10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 F8P00451 2351 aa10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
CLCNKA-202ENST00000375692 TRGV1A0A0A0MS02 117 aa10.08□□□□□ -0.8
CLCNKA-202ENST00000375692 INSP01308 110 aa10.08□□□□□ -0.8
CLCNKA-202ENST00000375692 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
CLCNKA-202ENST00000375692 C3orf56Q8N813 242 aa10.08□□□□□ -0.8
CLCNKA-202ENST00000375692 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
CLCNKA-202ENST00000375692 CYSRT1A8MQ03 144 aa10.07□□□□□ -0.8
CLCNKA-202ENST00000375692 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
CLCNKA-202ENST00000375692 INAFM1C9JVW0 142 aa10.07□□□□□ -0.8
CLCNKA-202ENST00000375692 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
CLCNKA-202ENST00000375692 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
CLCNKA-202ENST00000375692 TEP1Q99973 2627 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-202ENST00000375692 FAM218AQ96MZ4 157 aa10.06□□□□□ -0.8
CLCNKA-202ENST00000375692 DAZ2Q13117 558 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-202ENST00000375692 DEFB114Q30KQ6 69 aa10.06□□□□□ -0.8
CLCNKA-202ENST00000375692 DAZ4Q86SG3 579 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-202ENST00000375692 DAZ3Q9NR90 486 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-202ENST00000375692 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
CLCNKA-202ENST00000375692 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
CLCNKA-202ENST00000375692 PEMTQ9UBM1 199 aa10.05□□□□□ -0.8
CLCNKA-202ENST00000375692 BAALC-AS2P0C853 105 aa10.05□□□□□ -0.8
CLCNKA-202ENST00000375692 Q6ZTI0 123 aa10.05□□□□□ -0.8
CLCNKA-202ENST00000375692 F5H768 121 aa10.04□□□□□ -0.8
CLCNKA-202ENST00000375692 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
CLCNKA-202ENST00000375692 C11orf44Q8N8P7 122 aa10.04□□□□□ -0.8
CLCNKA-202ENST00000375692 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
CLCNKA-202ENST00000375692 FAM236AA0A1B0GUQ0 79 aa10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 FAM236BA0A1B0GV22 79 aa10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 SMIM20Q8N5G0 67 aa10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 Q9HAA7 133 aa10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 ODF3L2Q3SX64 289 aa10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 TMEM86BQ8N661 226 aa10.03□□□□□ -0.8
CLCNKA-202ENST00000375692 K7EQD1 137 aa10.02□□□□□ -0.81
CLCNKA-202ENST00000375692 FAM19A3Q7Z5A8 133 aa10.01□□□□□ -0.81
CLCNKA-202ENST00000375692 STHQ8IWL8 128 aa10.01□□□□□ -0.81
CLCNKA-202ENST00000375692 IGKV3OR2-268A0A0C4DH90 116 aa10□□□□□ -0.81
CLCNKA-202ENST00000375692 TRACP01848 142 aa10□□□□□ -0.81
CLCNKA-202ENST00000375692 ACYP1P07311 99 aa10□□□□□ -0.81
CLCNKA-202ENST00000375692 C4orf3Q8WVX3 66 aa10□□□□□ -0.81
CLCNKA-202ENST00000375692 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
CLCNKA-202ENST00000375692 COPS9Q8WXC6 57 aa10□□□□□ -0.81
CLCNKA-202ENST00000375692 HILS1P60008 231 aa9.99□□□□□ -0.81
CLCNKA-202ENST00000375692 IL17DQ8TAD2 202 aa9.99□□□□□ -0.81
CLCNKA-202ENST00000375692 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
CLCNKA-202ENST00000375692 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
CLCNKA-202ENST00000375692 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
CLCNKA-202ENST00000375692 RNASE1P07998 156 aaKnown RBP9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 A0A1W2PRX2 142 aa9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 HERV-K104P63124 156 aa9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 LINC00643Q86TS7 51 aa9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 LINC01006Q8NI28 216 aa9.98□□□□□ -0.81
CLCNKA-202ENST00000375692 TRBV10-1A0A0K0K1A3 114 aa9.97□□□□□ -0.81
CLCNKA-202ENST00000375692 UBE2L6O14933 153 aa9.97□□□□□ -0.81
CLCNKA-202ENST00000375692 GAGE2AQ6NT46 116 aa9.97□□□□□ -0.81
CLCNKA-202ENST00000375692 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
CLCNKA-202ENST00000375692 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
CLCNKA-202ENST00000375692 TMEM243Q9BU79 118 aa9.96□□□□□ -0.81
CLCNKA-202ENST00000375692 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
CLCNKA-202ENST00000375692 IMUPQ9GZP8 106 aa9.96□□□□□ -0.82
CLCNKA-202ENST00000375692 CRPP02741 224 aa9.95□□□□□ -0.82
CLCNKA-202ENST00000375692 MALP21145 153 aa9.95□□□□□ -0.82
CLCNKA-202ENST00000375692 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
CLCNKA-202ENST00000375692 A0A087WYN8 130 aa9.95□□□□□ -0.82
CLCNKA-202ENST00000375692 COX7B2Q8TF08 81 aa9.95□□□□□ -0.82
CLCNKA-202ENST00000375692 TENM1Q9UKZ4 2725 aa9.94□□□□□ -0.82
CLCNKA-202ENST00000375692 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
CLCNKA-202ENST00000375692 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
CLCNKA-202ENST00000375692 LINC00158P58513 81 aa9.94□□□□□ -0.82
CLCNKA-202ENST00000375692 SDIM1Q6ZPB5 146 aa9.94□□□□□ -0.82
CLCNKA-202ENST00000375692 SMIM11BQ8TCY0 68 aa9.94□□□□□ -0.82
CLCNKA-202ENST00000375692 IGLV4-60A0A075B6I1 120 aa9.93□□□□□ -0.82
CLCNKA-202ENST00000375692 TRGV2A0A075B6R0 118 aa9.93□□□□□ -0.82
CLCNKA-202ENST00000375692 ATP5G1P05496 136 aa9.93□□□□□ -0.82
CLCNKA-202ENST00000375692 FAM110AQ9BQ89 295 aa9.93□□□□□ -0.82
CLCNKA-202ENST00000375692 WFDC10AQ9H1F0 79 aa9.93□□□□□ -0.82
CLCNKA-202ENST00000375692 MAST4O15021 2626 aa9.92□□□□□ -0.82
CLCNKA-202ENST00000375692 FAM222AQ5U5X8 452 aa9.92□□□□□ -0.82
CLCNKA-202ENST00000375692 ATRQ13535 2644 aa9.92□□□□□ -0.82
CLCNKA-202ENST00000375692 GIG44P09565 113 aaPredicted RBP9.91□□□□□ -0.82
CLCNKA-202ENST00000375692 PFN2P35080 140 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms