RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
APOA1-205ENST00000375329 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
APOA1-205ENST00000375329 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
APOA1-205ENST00000375329 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
APOA1-205ENST00000375329 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
APOA1-205ENST00000375329 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
APOA1-205ENST00000375329 EPM2AB3EWF7 344 aa10.1□□□□□ -0.79
APOA1-205ENST00000375329 USP17L23D6RBM5 183 aa10.1□□□□□ -0.79
APOA1-205ENST00000375329 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.1□□□□□ -0.79
APOA1-205ENST00000375329 ATP5LO75964 103 aa10.1□□□□□ -0.79
APOA1-205ENST00000375329 MRPS36P82909 103 aaKnown RBP10.1□□□□□ -0.79
APOA1-205ENST00000375329 Q6ZN92 141 aa10.1□□□□□ -0.79
APOA1-205ENST00000375329 HIST3H2BBQ8N257 126 aa10.1□□□□□ -0.79
APOA1-205ENST00000375329 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 C5orf52A6NGY3 159 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 IFITM10A6NMD0 228 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 S100A2P29034 98 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 TEX43Q6ZNM6 134 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 VCX2Q9H322 139 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 HSPB8Q9UJY1 196 aa10.08□□□□□ -0.8
APOA1-205ENST00000375329 TRAV13-1A0A0B4J241 112 aa10.07□□□□□ -0.8
APOA1-205ENST00000375329 H0Y8G0 127 aa10.07□□□□□ -0.8
APOA1-205ENST00000375329 NPSP0C0P6 89 aa10.07□□□□□ -0.8
APOA1-205ENST00000375329 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
APOA1-205ENST00000375329 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
APOA1-205ENST00000375329 FAM229AH3BQW9 127 aa10.06□□□□□ -0.8
APOA1-205ENST00000375329 PRSS1P07477 247 aa10.06□□□□□ -0.8
APOA1-205ENST00000375329 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
APOA1-205ENST00000375329 AMELXQ99217 191 aa10.06□□□□□ -0.8
APOA1-205ENST00000375329 C2orf88Q9BSF0 95 aa10.06□□□□□ -0.8
APOA1-205ENST00000375329 LINC00959A0A1B0GUT2 108 aa10.05□□□□□ -0.8
APOA1-205ENST00000375329 PMVKQ15126 192 aa10.05□□□□□ -0.8
APOA1-205ENST00000375329 Q6ZSA8 131 aa10.05□□□□□ -0.8
APOA1-205ENST00000375329 HIST1H2BLQ99880 126 aa10.05□□□□□ -0.8
APOA1-205ENST00000375329 SS18Q15532 418 aa10.04□□□□□ -0.8
APOA1-205ENST00000375329 CST9LQ9H4G1 147 aa10.04□□□□□ -0.8
APOA1-205ENST00000375329 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
APOA1-205ENST00000375329 Q5VSD8 79 aa10.03□□□□□ -0.8
APOA1-205ENST00000375329 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
APOA1-205ENST00000375329 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
APOA1-205ENST00000375329 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
APOA1-205ENST00000375329 hDV102S1A0JD36 115 aa10.02□□□□□ -0.81
APOA1-205ENST00000375329 CCL25O15444 150 aa10.02□□□□□ -0.81
APOA1-205ENST00000375329 SMR3BP02814 79 aaPredicted RBP10.02□□□□□ -0.81
APOA1-205ENST00000375329 XCL1P47992 114 aa10.02□□□□□ -0.81
APOA1-205ENST00000375329 UBE2D1P51668 147 aa10.02□□□□□ -0.81
APOA1-205ENST00000375329 KRTDAPP60985 99 aa10.02□□□□□ -0.81
APOA1-205ENST00000375329 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
APOA1-205ENST00000375329 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
APOA1-205ENST00000375329 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
APOA1-205ENST00000375329 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
APOA1-205ENST00000375329 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
APOA1-205ENST00000375329 C9orf163Q8N9P6 203 aa10.01□□□□□ -0.81
APOA1-205ENST00000375329 CNBPP62633 177 aaKnown RBP10□□□□□ -0.81
APOA1-205ENST00000375329 CHAC1Q9BUX1 264 aa10□□□□□ -0.81
APOA1-205ENST00000375329 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
APOA1-205ENST00000375329 TRAV12-1A0A0B4J245 112 aa9.99□□□□□ -0.81
APOA1-205ENST00000375329 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
APOA1-205ENST00000375329 HAMPP81172 84 aa9.99□□□□□ -0.81
APOA1-205ENST00000375329 COX6A2Q02221 97 aa9.99□□□□□ -0.81
APOA1-205ENST00000375329 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
APOA1-205ENST00000375329 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
APOA1-205ENST00000375329 ODF1Q14990 250 aa9.98□□□□□ -0.81
APOA1-205ENST00000375329 MRPL35Q9NZE8 188 aaKnown RBP9.98□□□□□ -0.81
APOA1-205ENST00000375329 IGLV4-69A0A075B6H9 119 aa9.97□□□□□ -0.81
APOA1-205ENST00000375329 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
APOA1-205ENST00000375329 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
APOA1-205ENST00000375329 OR10D4PQ8NGN7 298 aa9.97□□□□□ -0.81
APOA1-205ENST00000375329 GEMIN7Q9H840 131 aaKnown RBP9.97□□□□□ -0.81
APOA1-205ENST00000375329 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.81
APOA1-205ENST00000375329 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 F8VRH5 84 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 FOXI1Q12951 378 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 PET117Q6UWS5 81 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 SCXQ7RTU7 201 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 FAM19A3Q7Z5A8 133 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 C5orf38Q86SI9 138 aa9.96□□□□□ -0.82
APOA1-205ENST00000375329 DNAH8Q96JB1 4490 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 IGHV3-64A0A075B6Q5 118 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 C11orf86A6NJI1 115 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 IGLC3P0DOY3 106 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 HERVK_113P63121 156 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 SEC11AP67812 179 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 LINC00469Q8N7U9 141 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 C15orf56Q8N910 161 aa9.95□□□□□ -0.82
APOA1-205ENST00000375329 IGHV1-58A0A0C4DH39 117 aa9.94□□□□□ -0.82
APOA1-205ENST00000375329 LINC00528Q8N1L1 170 aa9.94□□□□□ -0.82
APOA1-205ENST00000375329 CIRBP-AS1Q8TBR5 109 aa9.94□□□□□ -0.82
APOA1-205ENST00000375329 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
APOA1-205ENST00000375329 IGHV3OR16-9A0A0B4J2B5 98 aa9.93□□□□□ -0.82
APOA1-205ENST00000375329 COX7A2LO14548 114 aa9.93□□□□□ -0.82
APOA1-205ENST00000375329 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
APOA1-205ENST00000375329 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
APOA1-205ENST00000375329 SDIM1Q6ZPB5 146 aa9.93□□□□□ -0.82
APOA1-205ENST00000375329 CDKN2A-AS1Q9UH64 79 aa9.93□□□□□ -0.82
APOA1-205ENST00000375329 PKIGQ9Y2B9 76 aa9.93□□□□□ -0.82
APOA1-205ENST00000375329 FAT1Q14517 4588 aa9.92□□□□□ -0.82
APOA1-205ENST00000375329 C20orf202A1L168 122 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms