RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
HLA-DMA-201ENST00000374843 CHCHD10Q8WYQ3 142 aaPredicted RBP11.57□□□□□ -0.56
HLA-DMA-201ENST00000374843 KRTAP1-5Q9BYS1 174 aa11.57□□□□□ -0.56
HLA-DMA-201ENST00000374843 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
HLA-DMA-201ENST00000374843 LINC00469Q8N7U9 141 aa11.56□□□□□ -0.56
HLA-DMA-201ENST00000374843 LINC00476Q8WZB0 136 aa11.56□□□□□ -0.56
HLA-DMA-201ENST00000374843 CDKN2A-AS1Q9UH64 79 aa11.56□□□□□ -0.56
HLA-DMA-201ENST00000374843 TRAV8-3A0A0A6YYJ7 113 aa11.55□□□□□ -0.56
HLA-DMA-201ENST00000374843 XCL1P47992 114 aa11.55□□□□□ -0.56
HLA-DMA-201ENST00000374843 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
HLA-DMA-201ENST00000374843 KRTAP26-1Q6PEX3 210 aa11.55□□□□□ -0.56
HLA-DMA-201ENST00000374843 LINC00518Q8N0U6 118 aa11.55□□□□□ -0.56
HLA-DMA-201ENST00000374843 NBDYA0A0U1RRE5 68 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 hDV102S1A0JD36 115 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 H3BRM9 83 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 FOXI1Q12951 378 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 VAMP8Q9BV40 100 aa11.54□□□□□ -0.56
HLA-DMA-201ENST00000374843 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
HLA-DMA-201ENST00000374843 A0A087WZ39 114 aa11.53□□□□□ -0.56
HLA-DMA-201ENST00000374843 HSBP1L1C9JCN9 74 aa11.53□□□□□ -0.56
HLA-DMA-201ENST00000374843 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
HLA-DMA-201ENST00000374843 C12orf57Q99622 126 aa11.53□□□□□ -0.56
HLA-DMA-201ENST00000374843 HERVK_113P61574 105 aa11.52□□□□□ -0.57
HLA-DMA-201ENST00000374843 ANKRD39Q53RE8 183 aa11.52□□□□□ -0.57
HLA-DMA-201ENST00000374843 STPG4Q8N801 248 aa11.52□□□□□ -0.57
HLA-DMA-201ENST00000374843 C1orf43Q9BWL3 253 aa11.52□□□□□ -0.57
HLA-DMA-201ENST00000374843 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
HLA-DMA-201ENST00000374843 GAGE12HA6NDE8 117 aa11.51□□□□□ -0.57
HLA-DMA-201ENST00000374843 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
HLA-DMA-201ENST00000374843 E9PLD3 99 aa11.51□□□□□ -0.57
HLA-DMA-201ENST00000374843 S100A12P80511 92 aa11.51□□□□□ -0.57
HLA-DMA-201ENST00000374843 RMI2Q96E14 147 aa11.51□□□□□ -0.57
HLA-DMA-201ENST00000374843 COX7A2LO14548 114 aa11.5□□□□□ -0.57
HLA-DMA-201ENST00000374843 PAM16Q9Y3D7 125 aa11.5□□□□□ -0.57
HLA-DMA-201ENST00000374843 IGHV1-58A0A0C4DH39 117 aa11.49□□□□□ -0.57
HLA-DMA-201ENST00000374843 SPINK8P0C7L1 97 aa11.49□□□□□ -0.57
HLA-DMA-201ENST00000374843 SPATA45Q537H7 98 aa11.49□□□□□ -0.57
HLA-DMA-201ENST00000374843 Q9HAA7 133 aa11.49□□□□□ -0.57
HLA-DMA-201ENST00000374843 IGKV2D-24A0A075B6R9 120 aa11.48□□□□□ -0.57
HLA-DMA-201ENST00000374843 Q6ZR54 194 aa11.48□□□□□ -0.57
HLA-DMA-201ENST00000374843 COX11Q9Y6N1 276 aa11.48□□□□□ -0.57
HLA-DMA-201ENST00000374843 SACSQ9NZJ4 4579 aa11.47□□□□□ -0.57
HLA-DMA-201ENST00000374843 IGKV2D-26A0A0A0MRZ7 120 aa11.47□□□□□ -0.57
HLA-DMA-201ENST00000374843 LEPROTO15243 131 aa11.47□□□□□ -0.57
HLA-DMA-201ENST00000374843 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
HLA-DMA-201ENST00000374843 LY6G6CO95867 125 aa11.46□□□□□ -0.57
HLA-DMA-201ENST00000374843 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.57
HLA-DMA-201ENST00000374843 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
HLA-DMA-201ENST00000374843 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
HLA-DMA-201ENST00000374843 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
HLA-DMA-201ENST00000374843 KMT2AQ03164 3969 aa11.44□□□□□ -0.58
HLA-DMA-201ENST00000374843 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
HLA-DMA-201ENST00000374843 J3QQQ9 107 aa11.43□□□□□ -0.58
HLA-DMA-201ENST00000374843 APOMO95445 188 aa11.43□□□□□ -0.58
HLA-DMA-201ENST00000374843 Q6ZRN7 208 aaPredicted RBP11.43□□□□□ -0.58
HLA-DMA-201ENST00000374843 DNAH2Q9P225 4427 aa11.43□□□□□ -0.58
HLA-DMA-201ENST00000374843 COX8AP10176 69 aa11.42□□□□□ -0.58
HLA-DMA-201ENST00000374843 MALP21145 153 aa11.42□□□□□ -0.58
HLA-DMA-201ENST00000374843 NMUP48645 174 aa11.42□□□□□ -0.58
HLA-DMA-201ENST00000374843 Q8IZM0 81 aa11.41□□□□□ -0.58
HLA-DMA-201ENST00000374843 MAPKAPK5-AS1Q8N8E1 139 aa11.41□□□□□ -0.58
HLA-DMA-201ENST00000374843 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
HLA-DMA-201ENST00000374843 DLEU1O43261 78 aa11.4□□□□□ -0.58
HLA-DMA-201ENST00000374843 PCP2Q8IVA1 136 aa11.4□□□□□ -0.58
HLA-DMA-201ENST00000374843 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
HLA-DMA-201ENST00000374843 ORAOV1Q8WV07 137 aa11.4□□□□□ -0.58
HLA-DMA-201ENST00000374843 GVQW2A0A096LPI5 108 aaPredicted RBP11.39□□□□□ -0.59
HLA-DMA-201ENST00000374843 M0R2N4 97 aa11.39□□□□□ -0.59
HLA-DMA-201ENST00000374843 LGALS3P17931 250 aaKnown RBP11.39□□□□□ -0.59
HLA-DMA-201ENST00000374843 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
HLA-DMA-201ENST00000374843 BOD1L2Q8IYS8 172 aa11.39□□□□□ -0.59
HLA-DMA-201ENST00000374843 LCE6AA0A183 80 aa11.38□□□□□ -0.59
HLA-DMA-201ENST00000374843 NDUFA1O15239 70 aa11.38□□□□□ -0.59
HLA-DMA-201ENST00000374843 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
HLA-DMA-201ENST00000374843 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
HLA-DMA-201ENST00000374843 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
HLA-DMA-201ENST00000374843 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
HLA-DMA-201ENST00000374843 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
HLA-DMA-201ENST00000374843 C14orf144Q96I85 54 aa11.37□□□□□ -0.59
HLA-DMA-201ENST00000374843 TTTY13Q9BZ97 58 aa11.37□□□□□ -0.59
HLA-DMA-201ENST00000374843 NDUFA12Q9UI09 145 aa11.37□□□□□ -0.59
HLA-DMA-201ENST00000374843 MYMXA0A1B0GTQ4 84 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 ZNF815PA8K554 130 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 CXCL5P42830 114 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 SLC25A34Q6PIV7 304 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 UQCR10Q9UDW1 63 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 DNAH17Q9UFH2 4485 aa11.36□□□□□ -0.59
HLA-DMA-201ENST00000374843 HYDINQ4G0P3 5121 aa11.35□□□□□ -0.59
HLA-DMA-201ENST00000374843 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
HLA-DMA-201ENST00000374843 TSTD3H0UI37 97 aa11.35□□□□□ -0.59
HLA-DMA-201ENST00000374843 PRSS2P07478 247 aa11.35□□□□□ -0.59
HLA-DMA-201ENST00000374843 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
HLA-DMA-201ENST00000374843 F8WDY8 70 aa11.34□□□□□ -0.59
HLA-DMA-201ENST00000374843 PSCAO43653 123 aa11.34□□□□□ -0.59
HLA-DMA-201ENST00000374843 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
HLA-DMA-201ENST00000374843 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
HLA-DMA-201ENST00000374843 C1orf134Q5TEV5 83 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms