RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RHEBQ15382 184 aa12.14□□□□□ -0.47
TRAPPC3-204ENST00000373166 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-204ENST00000373166 PKIGQ9Y2B9 76 aa12.14□□□□□ -0.47
TRAPPC3-204ENST00000373166 COX6A2Q02221 97 aa12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 C10orf91Q5T1B1 145 aa12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 LINC00526Q96FQ7 95 aa12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 NXT2Q9NPJ8 142 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 CARHSP1Q9Y2V2 147 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
TRAPPC3-204ENST00000373166 K7EMI3 77 aa12.12□□□□□ -0.47
TRAPPC3-204ENST00000373166 APOMO95445 188 aa12.12□□□□□ -0.47
TRAPPC3-204ENST00000373166 CHTF8P0CG12 524 aa12.12□□□□□ -0.47
TRAPPC3-204ENST00000373166 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
TRAPPC3-204ENST00000373166 FAM104AQ969W3 186 aa12.12□□□□□ -0.47
TRAPPC3-204ENST00000373166 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
TRAPPC3-204ENST00000373166 A0A087WYN8 130 aa12.11□□□□□ -0.47
TRAPPC3-204ENST00000373166 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
TRAPPC3-204ENST00000373166 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
TRAPPC3-204ENST00000373166 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
TRAPPC3-204ENST00000373166 KIAA1644Q3SXP7 199 aa12.1□□□□□ -0.47
TRAPPC3-204ENST00000373166 COX19Q49B96 90 aa12.1□□□□□ -0.47
TRAPPC3-204ENST00000373166 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
TRAPPC3-204ENST00000373166 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
TRAPPC3-204ENST00000373166 RPS10P5Q9NQ39 176 aa12.1□□□□□ -0.47
TRAPPC3-204ENST00000373166 IGLV4-69A0A075B6H9 119 aa12.09□□□□□ -0.47
TRAPPC3-204ENST00000373166 IGKV2-24A0A0C4DH68 120 aa12.09□□□□□ -0.47
TRAPPC3-204ENST00000373166 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
TRAPPC3-204ENST00000373166 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
TRAPPC3-204ENST00000373166 GNB1LQ9BYB4 327 aa12.09□□□□□ -0.47
TRAPPC3-204ENST00000373166 Q6ZN92 141 aa12.08□□□□□ -0.48
TRAPPC3-204ENST00000373166 TEX43Q6ZNM6 134 aa12.08□□□□□ -0.48
TRAPPC3-204ENST00000373166 LINC01600Q96MT4 127 aa12.08□□□□□ -0.48
TRAPPC3-204ENST00000373166 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 MT-ND6P03923 174 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 G0S2P27469 103 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 SPAG11BQ08648 103 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 OR10D4PQ8NGN7 298 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 CAMK2N2Q96S95 79 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 C2orf88Q9BSF0 95 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 PLAC8Q9NZF1 115 aa12.07□□□□□ -0.48
TRAPPC3-204ENST00000373166 IGHV3OR16-9A0A0B4J2B5 98 aa12.06□□□□□ -0.48
TRAPPC3-204ENST00000373166 NDUFA5Q16718 116 aa12.06□□□□□ -0.48
TRAPPC3-204ENST00000373166 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
TRAPPC3-204ENST00000373166 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
TRAPPC3-204ENST00000373166 A0A096LNI7 61 aa12.05□□□□□ -0.48
TRAPPC3-204ENST00000373166 NPSP0C0P6 89 aa12.05□□□□□ -0.48
TRAPPC3-204ENST00000373166 ORAOV1Q8WV07 137 aa12.05□□□□□ -0.48
TRAPPC3-204ENST00000373166 APOC3P02656 99 aa12.04□□□□□ -0.48
TRAPPC3-204ENST00000373166 PAPPA-AS1Q5QFB9 102 aa12.03□□□□□ -0.48
TRAPPC3-204ENST00000373166 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
TRAPPC3-204ENST00000373166 ALKBH7Q9BT30 221 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC3-204ENST00000373166 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-204ENST00000373166 VCX2Q9H322 139 aa12.03□□□□□ -0.48
TRAPPC3-204ENST00000373166 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
TRAPPC3-204ENST00000373166 SNAPINO95295 136 aa12.02□□□□□ -0.49
TRAPPC3-204ENST00000373166 FABP9Q0Z7S8 132 aa12.02□□□□□ -0.49
TRAPPC3-204ENST00000373166 SVBPQ8N300 66 aa12.02□□□□□ -0.49
TRAPPC3-204ENST00000373166 STPG4Q8N801 248 aa12.02□□□□□ -0.49
TRAPPC3-204ENST00000373166 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
TRAPPC3-204ENST00000373166 UBE2D1P51668 147 aa12.01□□□□□ -0.49
TRAPPC3-204ENST00000373166 AMELXQ99217 191 aa12.01□□□□□ -0.49
TRAPPC3-204ENST00000373166 A0A087WZ39 114 aa12□□□□□ -0.49
TRAPPC3-204ENST00000373166 F8WDY8 70 aa12□□□□□ -0.49
TRAPPC3-204ENST00000373166 ODF1Q14990 250 aa12□□□□□ -0.49
TRAPPC3-204ENST00000373166 LINC00173Q6ZV60 143 aa12□□□□□ -0.49
TRAPPC3-204ENST00000373166 TOMM6Q96B49 74 aa12□□□□□ -0.49
TRAPPC3-204ENST00000373166 TIMM17AQ99595 171 aa12□□□□□ -0.49
TRAPPC3-204ENST00000373166 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
TRAPPC3-204ENST00000373166 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
TRAPPC3-204ENST00000373166 ZC2HC1BQ5TFG8 222 aa11.99□□□□□ -0.49
TRAPPC3-204ENST00000373166 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 NDUFA1O15239 70 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 GAGE2BQ13066 116 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 RNF151Q2KHN1 245 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 FA2HQ7L5A8 372 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 SMCO4Q9NRQ5 59 aa11.98□□□□□ -0.49
TRAPPC3-204ENST00000373166 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
TRAPPC3-204ENST00000373166 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
TRAPPC3-204ENST00000373166 MRPL35Q9NZE8 188 aaKnown RBP11.97□□□□□ -0.49
TRAPPC3-204ENST00000373166 LINC01546A6NGU7 62 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 KRTAP10-8P60410 259 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 SEC11AP67812 179 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 REG3GQ6UW15 175 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 ERASQ7Z444 233 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 LINC01561Q8N1V8 128 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 TRAPPC1Q9Y5R8 145 aa11.96□□□□□ -0.49
TRAPPC3-204ENST00000373166 HERVK_113P63121 156 aa11.94□□□□□ -0.5
TRAPPC3-204ENST00000373166 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
TRAPPC3-204ENST00000373166 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
TRAPPC3-204ENST00000373166 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
TRAPPC3-204ENST00000373166 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
TRAPPC3-204ENST00000373166 GEMIN7Q9H840 131 aaKnown RBP11.93□□□□□ -0.5
TRAPPC3-204ENST00000373166 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
TRAPPC3-204ENST00000373166 PRSS2P07478 247 aa11.91□□□□□ -0.5
TRAPPC3-204ENST00000373166 KIAA0087Q14695 138 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms