RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 FAM104BQ5XKR9 115 aa7.87□□□□□ -1.15
TRAPPC3-201ENST00000373159 UNQ6190/PRO20217Q6UXQ8 127 aa7.87□□□□□ -1.15
TRAPPC3-201ENST00000373159 V9GYV3 84 aa7.87□□□□□ -1.15
TRAPPC3-201ENST00000373159 LINC00862A6NCI5 91 aa7.86□□□□□ -1.15
TRAPPC3-201ENST00000373159 TCAPO15273 167 aa7.86□□□□□ -1.15
TRAPPC3-201ENST00000373159 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
TRAPPC3-201ENST00000373159 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
TRAPPC3-201ENST00000373159 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
TRAPPC3-201ENST00000373159 ZNF727A8MUV8 499 aa7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 RPL39P62891 51 aaKnown RBP7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 MRPS36P82909 103 aaKnown RBP7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 SMDT1Q9H4I9 107 aa7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 SPANXA1Q9NS26 97 aa7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 NAT8BQ9UHF3 227 aa7.85□□□□□ -1.15
TRAPPC3-201ENST00000373159 RPL13AP40429 203 aaKnown RBP7.84□□□□□ -1.15
TRAPPC3-201ENST00000373159 GAGE2EQ4V326 116 aa7.84□□□□□ -1.15
TRAPPC3-201ENST00000373159 ALKAL2Q6UX46 152 aa7.84□□□□□ -1.15
TRAPPC3-201ENST00000373159 EIF5A2Q9GZV4 153 aaKnown RBP7.84□□□□□ -1.15
TRAPPC3-201ENST00000373159 GAGE2DQ9UEU5 116 aa7.84□□□□□ -1.15
TRAPPC3-201ENST00000373159 UBE2D1P51668 147 aa7.83□□□□□ -1.16
TRAPPC3-201ENST00000373159 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
TRAPPC3-201ENST00000373159 PRR4Q16378 134 aa7.83□□□□□ -1.16
TRAPPC3-201ENST00000373159 CARHSP1Q9Y2V2 147 aaKnown RBP7.83□□□□□ -1.16
TRAPPC3-201ENST00000373159 TNFRSF6BO95407 300 aa7.82□□□□□ -1.16
TRAPPC3-201ENST00000373159 SRP19P09132 144 aaKnown RBP7.82□□□□□ -1.16
TRAPPC3-201ENST00000373159 CKS2P33552 79 aa7.82□□□□□ -1.16
TRAPPC3-201ENST00000373159 UBE2BP63146 152 aa7.82□□□□□ -1.16
TRAPPC3-201ENST00000373159 HBBP68871 147 aa7.82□□□□□ -1.16
TRAPPC3-201ENST00000373159 TRBV30A0A0K0K1B3 111 aa7.81□□□□□ -1.16
TRAPPC3-201ENST00000373159 A0A1B0GW15 77 aa7.81□□□□□ -1.16
TRAPPC3-201ENST00000373159 IFITM10A6NMD0 228 aa7.81□□□□□ -1.16
TRAPPC3-201ENST00000373159 M0QXV9 152 aa7.81□□□□□ -1.16
TRAPPC3-201ENST00000373159 FAM74A3Q4VXF1 159 aa7.81□□□□□ -1.16
TRAPPC3-201ENST00000373159 SMIM2Q9BVW6 85 aa7.81□□□□□ -1.16
TRAPPC3-201ENST00000373159 TGIF2-C20orf24A0A0A6YYL0 155 aa7.8□□□□□ -1.16
TRAPPC3-201ENST00000373159 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
TRAPPC3-201ENST00000373159 SMIM27A0A1W2PRY6 76 aa7.8□□□□□ -1.16
TRAPPC3-201ENST00000373159 NDUFC2-KCTD14E9PQ53 114 aa7.8□□□□□ -1.16
TRAPPC3-201ENST00000373159 ZNF861PO60384 105 aa7.79□□□□□ -1.16
TRAPPC3-201ENST00000373159 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
TRAPPC3-201ENST00000373159 LINC00242Q5T6M2 205 aa7.79□□□□□ -1.16
TRAPPC3-201ENST00000373159 D6R8Y8 96 aa7.78□□□□□ -1.16
TRAPPC3-201ENST00000373159 RPL23P62829 140 aaKnown RBP7.78□□□□□ -1.16
TRAPPC3-201ENST00000373159 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
TRAPPC3-201ENST00000373159 PYGO1Q9Y3Y4 419 aa7.78□□□□□ -1.16
TRAPPC3-201ENST00000373159 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.17
TRAPPC3-201ENST00000373159 PPBPP02775 128 aa7.77□□□□□ -1.17
TRAPPC3-201ENST00000373159 LINC01561Q8N1V8 128 aa7.77□□□□□ -1.17
TRAPPC3-201ENST00000373159 PACRGQ96M98 296 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC3-201ENST00000373159 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
TRAPPC3-201ENST00000373159 F8W036 122 aa7.76□□□□□ -1.17
TRAPPC3-201ENST00000373159 NPYP01303 97 aa7.76□□□□□ -1.17
TRAPPC3-201ENST00000373159 S100A8P05109 93 aa7.76□□□□□ -1.17
TRAPPC3-201ENST00000373159 IFI27P40305 119 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC3-201ENST00000373159 IGLV4-3A0A075B6K6 122 aa7.75□□□□□ -1.17
TRAPPC3-201ENST00000373159 RAB5AP20339 215 aa7.75□□□□□ -1.17
TRAPPC3-201ENST00000373159 ADIRFQ15847 76 aa7.75□□□□□ -1.17
TRAPPC3-201ENST00000373159 NAT8Q9UHE5 227 aa7.75□□□□□ -1.17
TRAPPC3-201ENST00000373159 A0A1B0GXF2 115 aa7.74□□□□□ -1.17
TRAPPC3-201ENST00000373159 NUPR1O60356 82 aa7.74□□□□□ -1.17
TRAPPC3-201ENST00000373159 MRPL54Q6P161 138 aaKnown RBP7.74□□□□□ -1.17
TRAPPC3-201ENST00000373159 TMEM141Q96I45 108 aa7.74□□□□□ -1.17
TRAPPC3-201ENST00000373159 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
TRAPPC3-201ENST00000373159 TSPAN13O95857 204 aa7.73□□□□□ -1.17
TRAPPC3-201ENST00000373159 LBHQ53QV2 105 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC3-201ENST00000373159 AKAP14Q86UN6 197 aa7.73□□□□□ -1.17
TRAPPC3-201ENST00000373159 PRSS47A8MTI9 375 aa7.72□□□□□ -1.17
TRAPPC3-201ENST00000373159 C9JQL5 133 aa7.72□□□□□ -1.17
TRAPPC3-201ENST00000373159 TEX43Q6ZNM6 134 aa7.72□□□□□ -1.17
TRAPPC3-201ENST00000373159 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
TRAPPC3-201ENST00000373159 ORMDL3Q8N138 153 aa7.72□□□□□ -1.17
TRAPPC3-201ENST00000373159 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
TRAPPC3-201ENST00000373159 CKS1BP61024 79 aa7.71□□□□□ -1.18
TRAPPC3-201ENST00000373159 C6orf226Q5I0X4 101 aa7.71□□□□□ -1.18
TRAPPC3-201ENST00000373159 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC3-201ENST00000373159 Q6ZN92 141 aa7.71□□□□□ -1.18
TRAPPC3-201ENST00000373159 PRELID3AQ96N28 172 aa7.71□□□□□ -1.18
TRAPPC3-201ENST00000373159 PRSS2P07478 247 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 CRYGAP11844 174 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 RPL28P46779 137 aaKnown RBP7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 Q8IZM0 81 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 AMELXQ99217 191 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 C2orf88Q9BSF0 95 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 TP73-AS1Q9UF72 201 aa7.7□□□□□ -1.18
TRAPPC3-201ENST00000373159 A0A087X002 238 aa7.69□□□□□ -1.18
TRAPPC3-201ENST00000373159 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
TRAPPC3-201ENST00000373159 VCX2Q9H322 139 aa7.69□□□□□ -1.18
TRAPPC3-201ENST00000373159 XAGE1AQ9HD64 81 aa7.69□□□□□ -1.18
TRAPPC3-201ENST00000373159 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
TRAPPC3-201ENST00000373159 BCE1O60756 84 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 NPSP0C0P6 89 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 PEA15Q15121 130 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 ZC2HC1BQ5TFG8 222 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 C2orf66Q6UXQ4 117 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 LINC00173Q6ZV60 143 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 ATP5L2Q7Z4Y8 100 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 TYMSOSQ8TAI1 123 aa7.68□□□□□ -1.18
TRAPPC3-201ENST00000373159 ALKBH7Q9BT30 221 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms