RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TRAV8-3A0A0A6YYJ7 113 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 TMEM97Q5BJF2 176 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 B9D2Q9BPU9 175 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 CDKN2A-AS1Q9UH64 79 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 FBN3Q75N90 2809 aa9.66□□□□□ -0.86
HMGCS2-201ENST00000369406 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
HMGCS2-201ENST00000369406 CLPSL2Q6UWE3 100 aa9.66□□□□□ -0.86
HMGCS2-201ENST00000369406 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
HMGCS2-201ENST00000369406 SPINK8P0C7L1 97 aa9.65□□□□□ -0.86
HMGCS2-201ENST00000369406 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
HMGCS2-201ENST00000369406 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
HMGCS2-201ENST00000369406 H3BNG1 76 aa9.64□□□□□ -0.87
HMGCS2-201ENST00000369406 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
HMGCS2-201ENST00000369406 LELP1Q5T871 98 aa9.64□□□□□ -0.87
HMGCS2-201ENST00000369406 ESRGQ1W209 222 aa9.63□□□□□ -0.87
HMGCS2-201ENST00000369406 GTF2H5Q6ZYL4 71 aa9.63□□□□□ -0.87
HMGCS2-201ENST00000369406 A0A1B0GUV1 79 aa9.63□□□□□ -0.87
HMGCS2-201ENST00000369406 TIRAPP58753 221 aa9.63□□□□□ -0.87
HMGCS2-201ENST00000369406 KRTAP21-3Q3LHN1 58 aa9.63□□□□□ -0.87
HMGCS2-201ENST00000369406 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
HMGCS2-201ENST00000369406 TGP01266 2768 aa9.62□□□□□ -0.87
HMGCS2-201ENST00000369406 GEMIN7Q9H840 131 aaKnown RBP9.62□□□□□ -0.87
HMGCS2-201ENST00000369406 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
HMGCS2-201ENST00000369406 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 J3QQQ9 107 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 K7EP34 96 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 LEPROTO15243 131 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 HERVK_113P61574 105 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 SMAGPQ0VAQ4 97 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 SH2D6Q7Z4S9 175 aa9.61□□□□□ -0.87
HMGCS2-201ENST00000369406 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
HMGCS2-201ENST00000369406 C9orf118A6NHY6 69 aa9.6□□□□□ -0.87
HMGCS2-201ENST00000369406 H3BUT2 72 aa9.6□□□□□ -0.87
HMGCS2-201ENST00000369406 HERVK_113P63121 156 aa9.6□□□□□ -0.87
HMGCS2-201ENST00000369406 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
HMGCS2-201ENST00000369406 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
HMGCS2-201ENST00000369406 IGHV3-30P01768 117 aa9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 IGHV3-33P01772 117 aa9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 IGHV3-30-5P0DP03 117 aa9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 SEC11AP67812 179 aa9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 DNAH10Q8IVF4 4471 aa9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
HMGCS2-201ENST00000369406 IGHV3OR16-9A0A0B4J2B5 98 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 A0A1B0GV72 72 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 H3BRM9 83 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 SIVA1O15304 175 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 IGLV10-54A0A075B6I4 117 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 XCL1P47992 114 aa9.57□□□□□ -0.88
HMGCS2-201ENST00000369406 HIGD1BQ9P298 99 aa9.56□□□□□ -0.88
HMGCS2-201ENST00000369406 IGLL5B9A064 214 aa9.56□□□□□ -0.88
HMGCS2-201ENST00000369406 LGALS3P17931 250 aaKnown RBP9.56□□□□□ -0.88
HMGCS2-201ENST00000369406 REG3AQ06141 175 aa9.56□□□□□ -0.88
HMGCS2-201ENST00000369406 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
HMGCS2-201ENST00000369406 ENHOQ6UWT2 76 aa9.55□□□□□ -0.88
HMGCS2-201ENST00000369406 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
HMGCS2-201ENST00000369406 RAB37Q96AX2 223 aa9.55□□□□□ -0.88
HMGCS2-201ENST00000369406 SIGMAR1Q99720 223 aa9.55□□□□□ -0.88
HMGCS2-201ENST00000369406 SPCS1Q9Y6A9 102 aa9.55□□□□□ -0.88
HMGCS2-201ENST00000369406 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
HMGCS2-201ENST00000369406 RPL24P83731 157 aaKnown RBP9.54□□□□□ -0.88
HMGCS2-201ENST00000369406 LINC00588Q9Y4M8 146 aa9.54□□□□□ -0.88
HMGCS2-201ENST00000369406 A6NDN8 102 aa9.54□□□□□ -0.88
HMGCS2-201ENST00000369406 PRR34Q9NV39 138 aa9.53□□□□□ -0.88
HMGCS2-201ENST00000369406 FXYD2P54710 66 aa9.53□□□□□ -0.88
HMGCS2-201ENST00000369406 HSD52Q0P140 79 aa9.53□□□□□ -0.88
HMGCS2-201ENST00000369406 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
HMGCS2-201ENST00000369406 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
HMGCS2-201ENST00000369406 A0A0J9YXY3 114 aa9.52□□□□□ -0.89
HMGCS2-201ENST00000369406 A0A1W2PPM0 123 aa9.52□□□□□ -0.89
HMGCS2-201ENST00000369406 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.89
HMGCS2-201ENST00000369406 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
HMGCS2-201ENST00000369406 A0A087WZ39 114 aa9.52□□□□□ -0.89
HMGCS2-201ENST00000369406 LITAFQ99732 161 aa9.52□□□□□ -0.89
HMGCS2-201ENST00000369406 SS18Q15532 418 aa9.51□□□□□ -0.89
HMGCS2-201ENST00000369406 C15orf53Q8NAA6 179 aa9.51□□□□□ -0.89
HMGCS2-201ENST00000369406 GCSHP23434 173 aa9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 FOXI1Q12951 378 aa9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 ADAMTSL4-AS1Q5T5F5 129 aa9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 GAGE12HA6NDE8 117 aa9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 CKS1BP61024 79 aa9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
HMGCS2-201ENST00000369406 UBE2WQ96B02 151 aa9.49□□□□□ -0.89
HMGCS2-201ENST00000369406 Q9H8V8 135 aa9.49□□□□□ -0.89
HMGCS2-201ENST00000369406 NDUFA1O15239 70 aa9.48□□□□□ -0.89
HMGCS2-201ENST00000369406 CEND1Q8N111 149 aa9.48□□□□□ -0.89
HMGCS2-201ENST00000369406 HIST1H4GQ99525 98 aa9.48□□□□□ -0.89
HMGCS2-201ENST00000369406 FABP2P12104 132 aa9.48□□□□□ -0.89
HMGCS2-201ENST00000369406 KRTAP26-1Q6PEX3 210 aa9.48□□□□□ -0.89
HMGCS2-201ENST00000369406 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
HMGCS2-201ENST00000369406 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms