RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 NIT2Q9NQR4 276 aa2.84□□□□□ -1.95
PTPRC-204ENST00000367379 GNG13Q9P2W3 67 aa2.84□□□□□ -1.95
PTPRC-204ENST00000367379 PKIGQ9Y2B9 76 aa2.84□□□□□ -1.95
PTPRC-204ENST00000367379 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.96
PTPRC-204ENST00000367379 TNXBP22105 4242 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 TRAV1-1A0A0B4J248 108 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 G3V3Q6 166 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 IGLC6P0CF74 106 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 TAGLN2P37802 199 aaKnown RBP2.83□□□□□ -1.96
PTPRC-204ENST00000367379 RPS10P46783 165 aaKnown RBP2.83□□□□□ -1.96
PTPRC-204ENST00000367379 NKX2-5P52952 324 aaPredicted RBP2.83□□□□□ -1.96
PTPRC-204ENST00000367379 CCL20P78556 96 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 CIRBPQ14011 172 aaKnown RBP2.83□□□□□ -1.96
PTPRC-204ENST00000367379 CENPWQ5EE01 88 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 AMMECR1LQ6DCA0 310 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 TEX261Q6UWH6 196 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 C9orf62Q8N4C0 152 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
PTPRC-204ENST00000367379 IGLV4-60A0A075B6I1 120 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 C19orf71A6NCJ1 209 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 SMLR1H3BR10 107 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 NDUFS6O75380 124 aaKnown RBP2.82□□□□□ -1.96
PTPRC-204ENST00000367379 NCR2O95944 276 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 NTF3P20783 257 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 MEF2BQ02080 365 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-204ENST00000367379 RNASEKQ6P5S7 137 aaKnown RBP2.82□□□□□ -1.96
PTPRC-204ENST00000367379 LYZL1Q6UWQ5 148 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 PET117Q6UWS5 81 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 OCC1Q8TAD7 63 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 TMEM101Q96IK0 257 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 BTF3L4Q96K17 158 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 FAM210AQ96ND0 272 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 MED9Q9NWA0 146 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 LINC00474Q9P2X8 69 aa2.82□□□□□ -1.96
PTPRC-204ENST00000367379 LRP2P98164 4655 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 IGKV3OR2-268A0A0C4DH90 116 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 RAB19A4D1S5 217 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 PANO1I0J062 215 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 APCSP02743 223 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 CTRLP40313 264 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 COX6A2Q02221 97 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 MAJINQ3KP22 176 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 LBHQ53QV2 105 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-204ENST00000367379 GATD1Q8NB37 220 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 SPACA4Q8TDM5 124 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 CHCHD10Q8WYQ3 142 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-204ENST00000367379 CNFNQ9BYD5 112 aa2.81□□□□□ -1.96
PTPRC-204ENST00000367379 GVQW2A0A096LPI5 108 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-204ENST00000367379 IGKV2-24A0A0C4DH68 120 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 SDHAF1A6NFY7 115 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 C5orf52A6NGY3 159 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 A8MWL6 223 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 I3L3M4 83 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 CHTF8P0CG12 524 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 MT1HL1P0DM35 61 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 BCL2P10415 239 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 FGF6P10767 208 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 ZNF25P17030 456 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-204ENST00000367379 PMCHP20382 165 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 SMAGPQ0VAQ4 97 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 C15orf56Q8N910 161 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 OR5A1Q8NGJ0 315 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 BORCS7Q96B45 105 aa2.8□□□□□ -1.96
PTPRC-204ENST00000367379 RPP21Q9H633 154 aaKnown RBP2.8□□□□□ -1.96
PTPRC-204ENST00000367379 TRBV20OR9-2A0A075B6H5 130 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.79□□□□□ -1.96
PTPRC-204ENST00000367379 TRAV26-2A0A0B4J265 109 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 IGHV1-58A0A0C4DH39 117 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 IGKV2-29A2NJV5 120 aaPredicted RBP2.79□□□□□ -1.96
PTPRC-204ENST00000367379 CCL25O15444 150 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 GATCO43716 136 aaKnown RBP2.79□□□□□ -1.96
PTPRC-204ENST00000367379 PPP1R17O96001 155 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 XCL1P47992 114 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 PRR3P79522 188 aaKnown RBP2.79□□□□□ -1.96
PTPRC-204ENST00000367379 SS18Q15532 418 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 SLC51BQ86UW2 128 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 LYPD6BQ8NI32 183 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 ISOC2Q96AB3 205 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 RPL39LQ96EH5 51 aaKnown RBP2.79□□□□□ -1.96
PTPRC-204ENST00000367379 MRAP2Q96G30 205 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 LINC01600Q96MT4 127 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 RNASE7Q9H1E1 156 aaKnown RBP2.79□□□□□ -1.96
PTPRC-204ENST00000367379 ST20Q9HBF5 79 aa2.79□□□□□ -1.96
PTPRC-204ENST00000367379 TRBV6-5A0A0K0K1A5 114 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 LINC00959A0A1B0GUT2 108 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 A0A1B0GUT8 65 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 C1orf196B1AJZ1 125 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 TMEM250H0YL14 139 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 FOXA3P55318 350 aaPredicted RBP2.78□□□□□ -1.96
PTPRC-204ENST00000367379 SYCNQ0VAF6 134 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 CD164L2Q6UWJ8 174 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 SPINK6Q6UWN8 80 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 FAM231DQ6ZW35 169 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 ZNF664Q8N3J9 261 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 CARD19Q96LW7 228 aa2.78□□□□□ -1.96
PTPRC-204ENST00000367379 A0A096LNI7 61 aa2.77□□□□□ -1.97
PTPRC-204ENST00000367379 A0A0J9YXV3 536 aa2.77□□□□□ -1.97
PTPRC-204ENST00000367379 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
PTPRC-204ENST00000367379 C7orf77A4D0Y5 90 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms