RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TRAV26-1A0A087WT03 109 aa7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 TRBV6-8A0A0A6YYG3 113 aa7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 LINC00587B1AMM8 73 aa7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 NFE4Q86UQ8 179 aa7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 STPG4Q8N801 248 aa7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 OPRPNQ99935 248 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-202ENST00000366216 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 F5H768 121 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 COX8AP10176 69 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 FGF6P10767 208 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 ZC2HC1BQ5TFG8 222 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 SH2D6Q7Z4S9 175 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 C14orf144Q96I85 54 aa7.73□□□□□ -1.17
CSNK1E-202ENST00000366216 H3BNG1 76 aa7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 UBE2L6O14933 153 aa7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 ZNF25P17030 456 aaPredicted RBP7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 MRPL23Q16540 153 aaKnown RBP7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 DGAT2L7PQ6IED9 249 aa7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 SLC25A34Q6PIV7 304 aa7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 UBE2DNLQ8IWF7 75 aa7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 C2orf88Q9BSF0 95 aa7.72□□□□□ -1.17
CSNK1E-202ENST00000366216 C11orf86A6NJI1 115 aa7.71□□□□□ -1.18
CSNK1E-202ENST00000366216 EPM2AB3EWF7 344 aa7.71□□□□□ -1.18
CSNK1E-202ENST00000366216 DLEU1O43261 78 aa7.71□□□□□ -1.18
CSNK1E-202ENST00000366216 INAFM2P0DMQ5 153 aa7.71□□□□□ -1.18
CSNK1E-202ENST00000366216 Q6ZUT4 128 aa7.71□□□□□ -1.18
CSNK1E-202ENST00000366216 A0A0J9YY99 117 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 HTN3P15516 51 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 OR5A1Q8NGJ0 315 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 TMEM101Q96IK0 257 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 ICOSQ9Y6W8 199 aa7.7□□□□□ -1.18
CSNK1E-202ENST00000366216 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 E9PLD3 99 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 UBE2D1P51668 147 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 HNRNPA3P51991 378 aaKnown RBP7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 HERVK_113P61574 105 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 BOD1L2Q8IYS8 172 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
CSNK1E-202ENST00000366216 A0A096LPF7 62 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 IGKV2D-26A0A0A0MRZ7 120 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 SIVA1O15304 175 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 NMUP48645 174 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 TIRAPP58753 221 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 GAGE6Q13070 117 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 CHCHD5Q9BSY4 110 aa7.68□□□□□ -1.18
CSNK1E-202ENST00000366216 A0A1B0GUV1 79 aa7.67□□□□□ -1.18
CSNK1E-202ENST00000366216 ZNF22P17026 224 aaPredicted RBP7.67□□□□□ -1.18
CSNK1E-202ENST00000366216 SEC11AP67812 179 aa7.67□□□□□ -1.18
CSNK1E-202ENST00000366216 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
CSNK1E-202ENST00000366216 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
CSNK1E-202ENST00000366216 IGLV5-45A0A087WSX0 123 aa7.66□□□□□ -1.18
CSNK1E-202ENST00000366216 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
CSNK1E-202ENST00000366216 CTAG1AP78358 180 aa7.66□□□□□ -1.18
CSNK1E-202ENST00000366216 LELP1Q5T871 98 aa7.66□□□□□ -1.18
CSNK1E-202ENST00000366216 PCP2Q8IVA1 136 aa7.66□□□□□ -1.18
CSNK1E-202ENST00000366216 IGLV4-60A0A075B6I1 120 aa7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 M0R143 59 aa7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 LEPROTO15243 131 aa7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 HERVK_113P63121 156 aa7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 C2orf91Q6ZV80 131 aa7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
CSNK1E-202ENST00000366216 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 TMEM262E9PQX1 116 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 RBX1P62877 108 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 LYPD5Q6UWN5 251 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 C6orf223Q8N319 242 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 HIGD1BQ9P298 99 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 TP73-AS1Q9UF72 201 aa7.63□□□□□ -1.19
CSNK1E-202ENST00000366216 TRAV13-1A0A0B4J241 112 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 MYMXA0A1B0GTQ4 84 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 H3BRM9 83 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 CCL25O15444 150 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 LBHQ53QV2 105 aaPredicted RBP7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 LINC00469Q8N7U9 141 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 SNHG12Q9BXW3 62 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 TTTY13Q9BZ97 58 aa7.62□□□□□ -1.19
CSNK1E-202ENST00000366216 IGHV1-58A0A0C4DH39 117 aa7.61□□□□□ -1.19
CSNK1E-202ENST00000366216 J3QQQ9 107 aa7.61□□□□□ -1.19
CSNK1E-202ENST00000366216 COX6A2Q02221 97 aa7.61□□□□□ -1.19
CSNK1E-202ENST00000366216 C15orf53Q8NAA6 179 aa7.61□□□□□ -1.19
CSNK1E-202ENST00000366216 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
CSNK1E-202ENST00000366216 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
CSNK1E-202ENST00000366216 Q5VSD8 79 aa7.6□□□□□ -1.19
CSNK1E-202ENST00000366216 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
CSNK1E-202ENST00000366216 NBDYA0A0U1RRE5 68 aa7.59□□□□□ -1.19
CSNK1E-202ENST00000366216 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
CSNK1E-202ENST00000366216 IGHV3-30-3P0DP02 117 aa7.59□□□□□ -1.19
CSNK1E-202ENST00000366216 TSPEAR-AS2P59090 65 aa7.59□□□□□ -1.19
CSNK1E-202ENST00000366216 KRTAP10-2P60368 255 aa7.59□□□□□ -1.19
CSNK1E-202ENST00000366216 HSD52Q0P140 79 aa7.59□□□□□ -1.19
CSNK1E-202ENST00000366216 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms