RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 SNHG12Q9BXW3 62 aa3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 KLK5Q9Y337 293 aaPredicted RBP3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 IGKV2D-26A0A0A0MRZ7 120 aa3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 GAGE2EQ4V326 116 aa3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 COPS9Q8WXC6 57 aa3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 C19orf73Q9NVV2 129 aa3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.78
PCDH11X-202ENST00000361655 LINC00315P59091 139 aa3.9□□□□□ -1.79
PCDH11X-202ENST00000361655 TRAV12-1A0A0B4J245 112 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 CAMK2N2Q96S95 79 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 ERG28Q9UKR5 140 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 TENM1Q9UKZ4 2725 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 A0A096LNJ9 63 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 GIG44P09565 113 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 PGPEP1Q9NXJ5 209 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 SPCS1Q9Y6A9 102 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 IGLV4-60A0A075B6I1 120 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 C12orf74Q32Q52 190 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 DNAL4O96015 105 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 MTURNQ8N3F0 131 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 UBE2D4Q9Y2X8 147 aa3.89□□□□□ -1.79
PCDH11X-202ENST00000361655 LEPROTO15243 131 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 SPAG11BQ08648 103 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 BOD1L2Q8IYS8 172 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 MRPS16Q9Y3D3 137 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 BVES-AS1Q5T3Y7 98 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 SAMD5Q5TGI4 173 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 RMI2Q96E14 147 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 K7EIL1 84 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 K7EP13 123 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 PIK3CD-AS1Q5SR53 167 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 MAPKAPK5-AS1Q8N8E1 139 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 CHCHD7Q9BUK0 85 aa3.88□□□□□ -1.79
PCDH11X-202ENST00000361655 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 E9PLD3 99 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 SIVA1O15304 175 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 FBN1P35555 2871 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 LBHQ53QV2 105 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 LELP1Q5T871 98 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 CSNK1G2-AS1Q8NCQ2 148 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 VPS25Q9BRG1 176 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 LY6G6CO95867 125 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 C2orf82Q6UX34 121 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 WFDC10BQ8IUB3 73 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 MUSTN1Q8IVN3 82 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 Q8NAQ8 132 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 CDC42SE2Q9NRR3 84 aa3.87□□□□□ -1.79
PCDH11X-202ENST00000361655 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 FXYD2P54710 66 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 GAGE2BQ13066 116 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 Q8N3U1 123 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 RPL32P62910 135 aaKnown RBP3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 CEND1Q8N111 149 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 IGKV2-24A0A0C4DH68 120 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 A0A1B0GWB2 263 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 A4D1N5 150 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 MIR7-3HGQ8N6C7 128 aa3.86□□□□□ -1.79
PCDH11X-202ENST00000361655 COX6A2Q02221 97 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 NFE4Q86UQ8 179 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 PYGO1Q9Y3Y4 419 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 LYPD5Q6UWN5 251 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 J3QR89 54 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 NKAPP1Q8N9T2 125 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 IL17DQ8TAD2 202 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 XAGE1AQ9HD64 81 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 VWFP04275 2813 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 TMEM223A0PJW6 202 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 NDUFA1O15239 70 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 C15orf53Q8NAA6 179 aa3.85□□□□□ -1.79
PCDH11X-202ENST00000361655 STAB2Q8WWQ8 2551 aa3.84□□□□□ -1.79
PCDH11X-202ENST00000361655 UBE2D1P51668 147 aa3.84□□□□□ -1.79
PCDH11X-202ENST00000361655 SND1-IT1Q9HBX3 110 aa3.84□□□□□ -1.79
PCDH11X-202ENST00000361655 VPS13CQ709C8 3753 aa3.84□□□□□ -1.79
PCDH11X-202ENST00000361655 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.79
PCDH11X-202ENST00000361655 A0A0J9YXY3 114 aa3.84□□□□□ -1.8
PCDH11X-202ENST00000361655 A8MTW9 85 aa3.84□□□□□ -1.8
PCDH11X-202ENST00000361655 ESRGQ1W209 222 aa3.84□□□□□ -1.8
PCDH11X-202ENST00000361655 ZNF575Q86XF7 245 aa3.84□□□□□ -1.8
PCDH11X-202ENST00000361655 H7C423 109 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 SLC25A20O43772 301 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 NCR3O14931 201 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 HERV-K104P63124 156 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 TM2D2Q9BX73 214 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 PLAC8L1A1L4L8 177 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 C9orf116Q5BN46 136 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 COX11Q9Y6N1 276 aa3.83□□□□□ -1.8
PCDH11X-202ENST00000361655 PRSS47A8MTI9 375 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms