RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 NACAE9PAV3 2078 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 TEX49A0A1B0GTD5 131 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 LINC00242Q5T6M2 205 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 C1orf158Q8N1D5 194 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 IL17DQ8TAD2 202 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 UBE2WQ96B02 151 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 XCL2Q9UBD3 114 aa8.86□□□□□ -0.99
UBA3-202ENST00000361055 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
UBA3-202ENST00000361055 COPS9Q8WXC6 57 aa8.85□□□□□ -0.99
UBA3-202ENST00000361055 NPC2P61916 151 aa8.85□□□□□ -0.99
UBA3-202ENST00000361055 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
UBA3-202ENST00000361055 DAZ2Q13117 558 aaKnown RBP8.85□□□□□ -0.99
UBA3-202ENST00000361055 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
UBA3-202ENST00000361055 DAZ4Q86SG3 579 aaKnown RBP8.85□□□□□ -0.99
UBA3-202ENST00000361055 STHQ8IWL8 128 aa8.85□□□□□ -0.99
UBA3-202ENST00000361055 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
UBA3-202ENST00000361055 DAZ3Q9NR90 486 aaKnown RBP8.85□□□□□ -0.99
UBA3-202ENST00000361055 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
UBA3-202ENST00000361055 ODF3L2Q3SX64 289 aa8.84□□□□□ -0.99
UBA3-202ENST00000361055 WFDC9Q8NEX5 89 aa8.84□□□□□ -0.99
UBA3-202ENST00000361055 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
UBA3-202ENST00000361055 MDFIQ99750 246 aa8.84□□□□□ -0.99
UBA3-202ENST00000361055 SNCGO76070 127 aa8.83□□□□□ -1
UBA3-202ENST00000361055 C9orf66Q5T8R8 295 aa8.83□□□□□ -1
UBA3-202ENST00000361055 Q9H8V8 135 aa8.83□□□□□ -1
UBA3-202ENST00000361055 TRAV26-1A0A087WT03 109 aa8.83□□□□□ -1
UBA3-202ENST00000361055 TRGV1A0A0A0MS02 117 aa8.83□□□□□ -1
UBA3-202ENST00000361055 GAGE2BQ13066 116 aa8.83□□□□□ -1
UBA3-202ENST00000361055 GAGE2EQ4V326 116 aa8.83□□□□□ -1
UBA3-202ENST00000361055 Q6Q795 121 aa8.83□□□□□ -1
UBA3-202ENST00000361055 SPATA3Q8NHX4 192 aa8.83□□□□□ -1
UBA3-202ENST00000361055 CLEC2BQ92478 149 aa8.83□□□□□ -1
UBA3-202ENST00000361055 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
UBA3-202ENST00000361055 TRRAPQ9Y4A5 3859 aa8.82□□□□□ -1
UBA3-202ENST00000361055 MRPL23Q16540 153 aaKnown RBP8.82□□□□□ -1
UBA3-202ENST00000361055 DAND5Q8N907 189 aa8.82□□□□□ -1
UBA3-202ENST00000361055 PPDPFQ9H3Y8 114 aa8.82□□□□□ -1
UBA3-202ENST00000361055 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
UBA3-202ENST00000361055 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
UBA3-202ENST00000361055 K7EQD1 137 aa8.82□□□□□ -1
UBA3-202ENST00000361055 LINC00694P0DN24 101 aa8.82□□□□□ -1
UBA3-202ENST00000361055 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
UBA3-202ENST00000361055 CDC42SE2Q9NRR3 84 aa8.82□□□□□ -1
UBA3-202ENST00000361055 COL6A5A8TX70 2615 aa8.82□□□□□ -1
UBA3-202ENST00000361055 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
UBA3-202ENST00000361055 FAM240AA0A1B0GVK7 77 aa8.8□□□□□ -1
UBA3-202ENST00000361055 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
UBA3-202ENST00000361055 HERV-K104P63124 156 aa8.8□□□□□ -1
UBA3-202ENST00000361055 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
UBA3-202ENST00000361055 STAB1Q9NY15 2570 aa8.8□□□□□ -1
UBA3-202ENST00000361055 F5H768 121 aa8.79□□□□□ -1
UBA3-202ENST00000361055 Q6ZTI0 123 aa8.79□□□□□ -1
UBA3-202ENST00000361055 TRAV13-1A0A0B4J241 112 aa8.79□□□□□ -1
UBA3-202ENST00000361055 COX7A2LO14548 114 aa8.79□□□□□ -1
UBA3-202ENST00000361055 C15orf53Q8NAA6 179 aa8.79□□□□□ -1
UBA3-202ENST00000361055 VWFP04275 2813 aa8.78□□□□□ -1
UBA3-202ENST00000361055 ANK2Q01484 3957 aa8.78□□□□□ -1
UBA3-202ENST00000361055 WIPF1O43516 503 aa8.78□□□□□ -1
UBA3-202ENST00000361055 SOSTDC1Q6X4U4 206 aa8.78□□□□□ -1
UBA3-202ENST00000361055 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
UBA3-202ENST00000361055 NHLRC4P0CG21 123 aaPredicted RBP8.77□□□□□ -1.01
UBA3-202ENST00000361055 NDUFV3P56181 108 aaKnown RBP8.77□□□□□ -1.01
UBA3-202ENST00000361055 GAGE4Q13068 117 aa8.77□□□□□ -1.01
UBA3-202ENST00000361055 GAGE5Q13069 117 aa8.77□□□□□ -1.01
UBA3-202ENST00000361055 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
UBA3-202ENST00000361055 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
UBA3-202ENST00000361055 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
UBA3-202ENST00000361055 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
UBA3-202ENST00000361055 FAM110AQ9BQ89 295 aa8.76□□□□□ -1.01
UBA3-202ENST00000361055 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
UBA3-202ENST00000361055 ACYP1P07311 99 aa8.75□□□□□ -1.01
UBA3-202ENST00000361055 GAGE6Q13070 117 aa8.75□□□□□ -1.01
UBA3-202ENST00000361055 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
UBA3-202ENST00000361055 CMYA5Q8N3K9 4069 aa8.75□□□□□ -1.01
UBA3-202ENST00000361055 UBE2L6O14933 153 aa8.75□□□□□ -1.01
UBA3-202ENST00000361055 TRACP01848 142 aa8.75□□□□□ -1.01
UBA3-202ENST00000361055 TRBV6-4A0A1B0GX49 114 aa8.74□□□□□ -1.01
UBA3-202ENST00000361055 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
UBA3-202ENST00000361055 C16orf74Q96GX8 76 aa8.74□□□□□ -1.01
UBA3-202ENST00000361055 OVOL2Q9BRP0 275 aa8.74□□□□□ -1.01
UBA3-202ENST00000361055 NOTCH3Q9UM47 2321 aa8.73□□□□□ -1.01
UBA3-202ENST00000361055 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
UBA3-202ENST00000361055 OXLD1Q5BKU9 147 aa8.73□□□□□ -1.01
UBA3-202ENST00000361055 TRAV13-2A0A0B4J235 113 aa8.72□□□□□ -1.01
UBA3-202ENST00000361055 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
UBA3-202ENST00000361055 TRGV2A0A075B6R0 118 aa8.72□□□□□ -1.01
UBA3-202ENST00000361055 FAM222AQ5U5X8 452 aa8.71□□□□□ -1.01
UBA3-202ENST00000361055 COX7B2Q8TF08 81 aa8.71□□□□□ -1.01
UBA3-202ENST00000361055 GAGE7O76087 117 aa8.71□□□□□ -1.02
UBA3-202ENST00000361055 BAALC-AS2P0C853 105 aa8.71□□□□□ -1.02
UBA3-202ENST00000361055 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
UBA3-202ENST00000361055 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
UBA3-202ENST00000361055 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
UBA3-202ENST00000361055 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
UBA3-202ENST00000361055 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
UBA3-202ENST00000361055 EGFEM1PQ0D2K5 195 aa8.7□□□□□ -1.02
UBA3-202ENST00000361055 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
UBA3-202ENST00000361055 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
UBA3-202ENST00000361055 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
UBA3-202ENST00000361055 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms