RNA–Protein interactions for RNA: ENST00000360906.9

NLRC4-202, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-202ENST00000360906 DNAH1Q9P2D7 4330 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 SCGB1D1O95968 90 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 COX6A2Q02221 97 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 ENHOQ6UWT2 76 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 SPATA12Q7Z6I5 190 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 BAALCQ8WXS3 180 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 TMEM18Q96B42 140 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 RYR3Q15413 4870 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 H3BNG1 76 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 TEX43Q6ZNM6 134 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 SH2D6Q7Z4S9 175 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 CDC42SE2Q9NRR3 84 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 MRPS16Q9Y3D3 137 aaKnown RBP4.35□□□□□ -1.71
NLRC4-202ENST00000360906 SACSQ9NZJ4 4579 aa4.35□□□□□ -1.71
NLRC4-202ENST00000360906 A0A0U1RRA0 63 aa4.34□□□□□ -1.71
NLRC4-202ENST00000360906 C3orf79P0CE67 100 aa4.34□□□□□ -1.71
NLRC4-202ENST00000360906 TOMM6Q96B49 74 aa4.34□□□□□ -1.71
NLRC4-202ENST00000360906 TMEM141Q96I45 108 aa4.34□□□□□ -1.71
NLRC4-202ENST00000360906 MRPL35Q9NZE8 188 aaKnown RBP4.34□□□□□ -1.71
NLRC4-202ENST00000360906 NBDYA0A0U1RRE5 68 aa4.34□□□□□ -1.71
NLRC4-202ENST00000360906 GAGE12HA6NDE8 117 aa4.34□□□□□ -1.71
NLRC4-202ENST00000360906 CHCHD1Q96BP2 118 aaKnown RBP4.34□□□□□ -1.71
NLRC4-202ENST00000360906 ZNF625Q96I27 306 aaPredicted RBP4.34□□□□□ -1.71
NLRC4-202ENST00000360906 IGIPA6NJ69 53 aa4.34□□□□□ -1.72
NLRC4-202ENST00000360906 CHCHD10Q8WYQ3 142 aaPredicted RBP4.34□□□□□ -1.72
NLRC4-202ENST00000360906 FAM104AQ969W3 186 aa4.34□□□□□ -1.72
NLRC4-202ENST00000360906 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.72
NLRC4-202ENST00000360906 TRAV8-3A0A0A6YYJ7 113 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 LINC00959A0A1B0GUT2 108 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 WFDC2Q14508 124 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 MAP1LC3CQ9BXW4 147 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 TTTY13Q9BZ97 58 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 LGALS9CQ6DKI2 356 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 CDKN2A-AS1Q9UH64 79 aa4.33□□□□□ -1.72
NLRC4-202ENST00000360906 MALP21145 153 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 SIGMAR1Q99720 223 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
NLRC4-202ENST00000360906 SS18Q15532 418 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 LINC01556Q5JQF7 62 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 HSPB8Q9UJY1 196 aa4.32□□□□□ -1.72
NLRC4-202ENST00000360906 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 HAMPP81172 84 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 PMVKQ15126 192 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 TMEM97Q5BJF2 176 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 COA6Q5JTJ3 125 aaKnown RBP4.31□□□□□ -1.72
NLRC4-202ENST00000360906 C6orf223Q8N319 242 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 ATP5LO75964 103 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 LINC00242Q5T6M2 205 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 C1orf134Q5TEV5 83 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 C2orf82Q6UX34 121 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
NLRC4-202ENST00000360906 TNP2Q05952 138 aa4.3□□□□□ -1.72
NLRC4-202ENST00000360906 PPDPFQ9H3Y8 114 aa4.3□□□□□ -1.72
NLRC4-202ENST00000360906 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
NLRC4-202ENST00000360906 A0A1B0GUV1 79 aa4.3□□□□□ -1.72
NLRC4-202ENST00000360906 B5MCH6 92 aa4.3□□□□□ -1.72
NLRC4-202ENST00000360906 LCE6AA0A183 80 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 IBA57-AS1B1ANH7 110 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 NMUP48645 174 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
NLRC4-202ENST00000360906 TIMM17AQ99595 171 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 F8WDY8 70 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 UBE2D1P51668 147 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 DPH3Q96FX2 82 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
NLRC4-202ENST00000360906 RYR2Q92736 4967 aa4.29□□□□□ -1.72
NLRC4-202ENST00000360906 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 NPC2P61916 151 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 COX7A2LO14548 114 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
NLRC4-202ENST00000360906 MIAQ16674 131 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 C6orf226Q5I0X4 101 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 C10orf126Q8N4M7 172 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 UPK3BQ9BT76 320 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 IGLV4-69A0A075B6H9 119 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 IGKCP01834 107 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 AMELXQ99217 191 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
NLRC4-202ENST00000360906 K7EMI3 77 aa4.27□□□□□ -1.73
NLRC4-202ENST00000360906 DPM2O94777 84 aa4.27□□□□□ -1.73
NLRC4-202ENST00000360906 PFN2P35080 140 aa4.27□□□□□ -1.73
NLRC4-202ENST00000360906 MTURNQ8N3F0 131 aa4.27□□□□□ -1.73
NLRC4-202ENST00000360906 F8VRH5 84 aa4.27□□□□□ -1.73
NLRC4-202ENST00000360906 ZNF561-AS1K7EIQ3 104 aa4.27□□□□□ -1.73
NLRC4-202ENST00000360906 RTL8CO15255 209 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms