RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TSHBP01222 138 aa6.9□□□□□ -1.31
VPS13A-203ENST00000360280 ZFP36P26651 326 aaKnown RBP6.9□□□□□ -1.31
VPS13A-203ENST00000360280 IGF2-ASQ6U949 168 aa6.9□□□□□ -1.31
VPS13A-203ENST00000360280 IGFL2Q6UWQ7 119 aa6.9□□□□□ -1.31
VPS13A-203ENST00000360280 P0C879 139 aa6.9□□□□□ -1.31
VPS13A-203ENST00000360280 X6R8D5 127 aa6.89□□□□□ -1.31
VPS13A-203ENST00000360280 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
VPS13A-203ENST00000360280 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
VPS13A-203ENST00000360280 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
VPS13A-203ENST00000360280 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
VPS13A-203ENST00000360280 A6NDX4 124 aa6.89□□□□□ -1.31
VPS13A-203ENST00000360280 NANOS2P60321 138 aaKnown RBP6.88□□□□□ -1.31
VPS13A-203ENST00000360280 Q8N814 137 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 Q8N3U1 123 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 ODF3BA8MYP8 253 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 ABCA2Q9BZC7 2435 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 MBD6Q96DN6 1003 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 PIP4P1Q86T03 277 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 H0Y9P7 68 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
VPS13A-203ENST00000360280 LINC00574Q9H8X3 128 aa6.88□□□□□ -1.31
VPS13A-203ENST00000360280 LELP1Q5T871 98 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 REG3GQ6UW15 175 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 TRAV10A0A0B4J240 114 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 MUC6Q6W4X9 2439 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 LOC100131303A0A0U1RQF7 123 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 MYO18BQ8IUG5 2567 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 CXCL6P80162 114 aa6.87□□□□□ -1.31
VPS13A-203ENST00000360280 TNFRSF13BO14836 293 aaPredicted RBP6.86□□□□□ -1.31
VPS13A-203ENST00000360280 MRGPRG-AS1Q2M3A8 158 aa6.86□□□□□ -1.31
VPS13A-203ENST00000360280 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
VPS13A-203ENST00000360280 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
VPS13A-203ENST00000360280 CRYGAP11844 174 aa6.85□□□□□ -1.31
VPS13A-203ENST00000360280 ADORA2A-AS1P86434 159 aa6.85□□□□□ -1.31
VPS13A-203ENST00000360280 EIF4EBP1Q13541 118 aaPredicted RBP6.85□□□□□ -1.31
VPS13A-203ENST00000360280 ACACBO00763 2458 aa6.85□□□□□ -1.31
VPS13A-203ENST00000360280 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
VPS13A-203ENST00000360280 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
VPS13A-203ENST00000360280 CNFNQ9BYD5 112 aa6.84□□□□□ -1.31
VPS13A-203ENST00000360280 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
VPS13A-203ENST00000360280 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.32
VPS13A-203ENST00000360280 PRORYQ9H606 182 aa6.84□□□□□ -1.32
VPS13A-203ENST00000360280 FBXL19-AS1Q494R0 122 aa6.83□□□□□ -1.32
VPS13A-203ENST00000360280 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
VPS13A-203ENST00000360280 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
VPS13A-203ENST00000360280 Q6ZS46 218 aa6.83□□□□□ -1.32
VPS13A-203ENST00000360280 NRGNQ92686 78 aa6.83□□□□□ -1.32
VPS13A-203ENST00000360280 KPRPQ5T749 579 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-203ENST00000360280 LRRK2Q5S007 2527 aa6.83□□□□□ -1.32
VPS13A-203ENST00000360280 ZNF843Q8N446 348 aa6.82□□□□□ -1.32
VPS13A-203ENST00000360280 FSTL3O95633 263 aa6.82□□□□□ -1.32
VPS13A-203ENST00000360280 C2CD3Q4AC94 2353 aa6.82□□□□□ -1.32
VPS13A-203ENST00000360280 IGLV2-11P01706 119 aa6.82□□□□□ -1.32
VPS13A-203ENST00000360280 EGFEM1PQ0D2K5 195 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 Q6YL49 198 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 RNASE3P12724 160 aaKnown RBP6.81□□□□□ -1.32
VPS13A-203ENST00000360280 CRIP1P50238 77 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
VPS13A-203ENST00000360280 A0A087WVE0 104 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 TRBV10-3A0A0K0K1G6 114 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 F8WDY8 70 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 CCDC168Q8NDH2 2452 aa6.81□□□□□ -1.32
VPS13A-203ENST00000360280 KLLNB2CW77 178 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 PLA2G2AP14555 144 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 SPINK1P00995 79 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 Q8N6K4 173 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 CYSRT1A8MQ03 144 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 A0A087WYN8 130 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 MYO9AB2RTY4 2548 aa6.8□□□□□ -1.32
VPS13A-203ENST00000360280 A0A1B0GU69 56 aa6.79□□□□□ -1.32
VPS13A-203ENST00000360280 POLR2KP53803 58 aaKnown RBP6.79□□□□□ -1.32
VPS13A-203ENST00000360280 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
VPS13A-203ENST00000360280 PROK1P58294 105 aa6.79□□□□□ -1.32
VPS13A-203ENST00000360280 DOPEY1Q5JWR5 2465 aa6.79□□□□□ -1.32
VPS13A-203ENST00000360280 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
VPS13A-203ENST00000360280 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
VPS13A-203ENST00000360280 CHCHD7Q9BUK0 85 aa6.78□□□□□ -1.32
VPS13A-203ENST00000360280 GPR179Q6PRD1 2367 aa6.78□□□□□ -1.32
VPS13A-203ENST00000360280 ZNF295-AS1Q8N0V1 137 aa6.77□□□□□ -1.32
VPS13A-203ENST00000360280 SHISA2Q6UWI4 295 aa6.77□□□□□ -1.33
VPS13A-203ENST00000360280 Q9BRP9 147 aa6.77□□□□□ -1.33
VPS13A-203ENST00000360280 SMIM1B2RUZ4 78 aa6.77□□□□□ -1.33
VPS13A-203ENST00000360280 PCOTHQ58A44 107 aa6.77□□□□□ -1.33
VPS13A-203ENST00000360280 ZNF702PQ9H963 129 aa6.77□□□□□ -1.33
VPS13A-203ENST00000360280 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
VPS13A-203ENST00000360280 IGIPA6NJ69 53 aa6.76□□□□□ -1.33
VPS13A-203ENST00000360280 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
VPS13A-203ENST00000360280 IGLV2-18A0A075B6J9 118 aa6.76□□□□□ -1.33
VPS13A-203ENST00000360280 SBSPONQ8IVN8 264 aa6.76□□□□□ -1.33
VPS13A-203ENST00000360280 CACNA1AO00555 2505 aa6.76□□□□□ -1.33
VPS13A-203ENST00000360280 HIVEP3Q5T1R4 2406 aa6.75□□□□□ -1.33
VPS13A-203ENST00000360280 ACYP2P14621 99 aa6.75□□□□□ -1.33
VPS13A-203ENST00000360280 COL4A3Q01955 1670 aa6.75□□□□□ -1.33
VPS13A-203ENST00000360280 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
VPS13A-203ENST00000360280 Q6ZTC4 211 aa6.75□□□□□ -1.33
VPS13A-203ENST00000360280 PRLHP81277 87 aa6.74□□□□□ -1.33
VPS13A-203ENST00000360280 A0A087WSZ3 146 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms