RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 UNC79Q9P2D8 2635 aa7.21□□□□□ -1.26
CUX1-203ENST00000360264 LY6LH3BQJ8 138 aa7.21□□□□□ -1.26
CUX1-203ENST00000360264 TP73-AS1Q9UF72 201 aa7.21□□□□□ -1.26
CUX1-203ENST00000360264 CEMP1Q6PRD7 247 aaPredicted RBP7.21□□□□□ -1.26
CUX1-203ENST00000360264 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
CUX1-203ENST00000360264 MPLKIPQ8TAP9 179 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 C10orf25Q5T742 122 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 Q8IZM0 81 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 ZNF73O43830 326 aaPredicted RBP7.2□□□□□ -1.26
CUX1-203ENST00000360264 CDPF1Q6NVV7 123 aa7.2□□□□□ -1.26
CUX1-203ENST00000360264 CHCHD7Q9BUK0 85 aa7.19□□□□□ -1.26
CUX1-203ENST00000360264 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.19□□□□□ -1.26
CUX1-203ENST00000360264 F8WDY8 70 aa7.19□□□□□ -1.26
CUX1-203ENST00000360264 NUPR1O60356 82 aa7.19□□□□□ -1.26
CUX1-203ENST00000360264 ZFAND3Q9H8U3 227 aa7.19□□□□□ -1.26
CUX1-203ENST00000360264 UBE2D2P62837 147 aa7.19□□□□□ -1.26
CUX1-203ENST00000360264 TRBV6-5A0A0K0K1A5 114 aa7.19□□□□□ -1.26
CUX1-203ENST00000360264 IGLV2-8P01709 118 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 A0A096LNI7 61 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 ZNF80P51504 273 aaPredicted RBP7.18□□□□□ -1.26
CUX1-203ENST00000360264 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 C20orf197Q8N268 126 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 Q6ZSV7 163 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 ZNF843Q8N446 348 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 PTH2Q96A98 100 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 KLLNB2CW77 178 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 TRIAP1O43715 76 aa7.18□□□□□ -1.26
CUX1-203ENST00000360264 WFDC11Q8NEX6 87 aa7.17□□□□□ -1.26
CUX1-203ENST00000360264 C11orf1Q9H5F2 150 aa7.17□□□□□ -1.26
CUX1-203ENST00000360264 TP53TG3Q9ULZ0 132 aa7.17□□□□□ -1.26
CUX1-203ENST00000360264 LY6G6CO95867 125 aa7.17□□□□□ -1.26
CUX1-203ENST00000360264 COL4A4P53420 1690 aaPredicted RBP7.17□□□□□ -1.26
CUX1-203ENST00000360264 XAGE1AQ9HD64 81 aa7.17□□□□□ -1.26
CUX1-203ENST00000360264 SERP2Q8N6R1 65 aa7.17□□□□□ -1.26
CUX1-203ENST00000360264 A6NED7 52 aa7.16□□□□□ -1.26
CUX1-203ENST00000360264 MLST8Q9BVC4 326 aa7.16□□□□□ -1.26
CUX1-203ENST00000360264 IGLV5-52A0A0A0MRZ9 124 aa7.16□□□□□ -1.26
CUX1-203ENST00000360264 BBC3Q96PG8 261 aaPredicted RBP7.16□□□□□ -1.26
CUX1-203ENST00000360264 NDUFA7O95182 113 aa7.16□□□□□ -1.26
CUX1-203ENST00000360264 TEP1Q99973 2627 aaKnown RBP7.16□□□□□ -1.26
CUX1-203ENST00000360264 Q6JHZ5 121 aa7.16□□□□□ -1.26
CUX1-203ENST00000360264 LY6G6DO95868 133 aa7.15□□□□□ -1.26
CUX1-203ENST00000360264 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
CUX1-203ENST00000360264 TTTY13Q9BZ97 58 aa7.15□□□□□ -1.26
CUX1-203ENST00000360264 PLA2G2EQ9NZK7 142 aa7.15□□□□□ -1.26
CUX1-203ENST00000360264 A0A1W2PNU3 283 aaPredicted RBP7.15□□□□□ -1.27
CUX1-203ENST00000360264 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.27
CUX1-203ENST00000360264 LINC00959A0A1B0GUT2 108 aa7.14□□□□□ -1.27
CUX1-203ENST00000360264 SCXQ7RTU7 201 aa7.14□□□□□ -1.27
CUX1-203ENST00000360264 RBX1P62877 108 aa7.14□□□□□ -1.27
CUX1-203ENST00000360264 PLAC8L1A1L4L8 177 aa7.14□□□□□ -1.27
CUX1-203ENST00000360264 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
CUX1-203ENST00000360264 Q6ZVQ6 151 aa7.14□□□□□ -1.27
CUX1-203ENST00000360264 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
CUX1-203ENST00000360264 MBD6Q96DN6 1003 aa7.13□□□□□ -1.27
CUX1-203ENST00000360264 PRYO14603 147 aa7.13□□□□□ -1.27
CUX1-203ENST00000360264 SLPIP03973 132 aa7.13□□□□□ -1.27
CUX1-203ENST00000360264 C3orf84H3BNL1 204 aa7.13□□□□□ -1.27
CUX1-203ENST00000360264 M0R2N4 97 aa7.13□□□□□ -1.27
CUX1-203ENST00000360264 RNASE8Q8TDE3 154 aaKnown RBP7.13□□□□□ -1.27
CUX1-203ENST00000360264 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
CUX1-203ENST00000360264 COL6A5A8TX70 2615 aa7.12□□□□□ -1.27
CUX1-203ENST00000360264 CRIP1P50238 77 aa7.12□□□□□ -1.27
CUX1-203ENST00000360264 Q6ZQY7 126 aa7.12□□□□□ -1.27
CUX1-203ENST00000360264 COL27A1Q8IZC6 1860 aaPredicted RBP7.12□□□□□ -1.27
CUX1-203ENST00000360264 CEP350Q5VT06 3117 aa7.12□□□□□ -1.27
CUX1-203ENST00000360264 CLUHP3Q96NS8 147 aa7.12□□□□□ -1.27
CUX1-203ENST00000360264 FSHBP01225 129 aa7.12□□□□□ -1.27
CUX1-203ENST00000360264 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
CUX1-203ENST00000360264 LINC00482Q8N8I6 264 aa7.11□□□□□ -1.27
CUX1-203ENST00000360264 CYSRT1A8MQ03 144 aa7.11□□□□□ -1.27
CUX1-203ENST00000360264 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
CUX1-203ENST00000360264 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 C19orf84I3L1E1 186 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 GDF5OSQ5U4N7 250 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 IGLV2-18A0A075B6J9 118 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 IGKV2-28A0A075B6P5 120 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 LST1O00453 97 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 IGKV2D-28P01615 120 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 C11orf71Q6IPW1 123 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 IGLV2-11P01706 119 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 MSMPQ1L6U9 139 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 CFAP54Q96N23 3096 aa7.1□□□□□ -1.27
CUX1-203ENST00000360264 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
CUX1-203ENST00000360264 ZNF292O60281 2723 aa7.09□□□□□ -1.27
CUX1-203ENST00000360264 ZNF702PQ9H963 129 aa7.09□□□□□ -1.27
CUX1-203ENST00000360264 NRACQ8N912 160 aa7.09□□□□□ -1.27
CUX1-203ENST00000360264 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
CUX1-203ENST00000360264 RNASE3P12724 160 aaKnown RBP7.09□□□□□ -1.28
CUX1-203ENST00000360264 TSHBP01222 138 aa7.09□□□□□ -1.28
CUX1-203ENST00000360264 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 CDC42SE2Q9NRR3 84 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 Q8N814 137 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms