RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
NIF3L1-201ENST00000359683 UBE2D1P51668 147 aa8.27□□□□□ -1.09
NIF3L1-201ENST00000359683 SNRPEP62304 92 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-201ENST00000359683 SS18Q15532 418 aa8.27□□□□□ -1.09
NIF3L1-201ENST00000359683 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
NIF3L1-201ENST00000359683 TM2D2Q9BX73 214 aa8.27□□□□□ -1.09
NIF3L1-201ENST00000359683 COX11Q9Y6N1 276 aa8.27□□□□□ -1.09
NIF3L1-201ENST00000359683 IGLV10-54A0A075B6I4 117 aa8.26□□□□□ -1.09
NIF3L1-201ENST00000359683 IGKV2D-24A0A075B6R9 120 aa8.26□□□□□ -1.09
NIF3L1-201ENST00000359683 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
NIF3L1-201ENST00000359683 PRSS1P07477 247 aa8.26□□□□□ -1.09
NIF3L1-201ENST00000359683 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
NIF3L1-201ENST00000359683 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
NIF3L1-201ENST00000359683 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
NIF3L1-201ENST00000359683 DNAH10Q8IVF4 4471 aa8.25□□□□□ -1.09
NIF3L1-201ENST00000359683 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
NIF3L1-201ENST00000359683 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
NIF3L1-201ENST00000359683 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
NIF3L1-201ENST00000359683 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
NIF3L1-201ENST00000359683 XCL1P47992 114 aa8.24□□□□□ -1.09
NIF3L1-201ENST00000359683 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
NIF3L1-201ENST00000359683 HIST1H2BLQ99880 126 aa8.24□□□□□ -1.09
NIF3L1-201ENST00000359683 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
NIF3L1-201ENST00000359683 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 GAGE12HA6NDE8 117 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 RTL8CO15255 209 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 S100A2P29034 98 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 SEC11AP67812 179 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 COX6A2Q02221 97 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 FOXI1Q12951 378 aa8.23□□□□□ -1.09
NIF3L1-201ENST00000359683 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
NIF3L1-201ENST00000359683 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
NIF3L1-201ENST00000359683 SPATA12Q7Z6I5 190 aa8.22□□□□□ -1.09
NIF3L1-201ENST00000359683 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.09
NIF3L1-201ENST00000359683 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.09
NIF3L1-201ENST00000359683 CHTOPQ9Y3Y2 248 aaKnown RBP8.21□□□□□ -1.09
NIF3L1-201ENST00000359683 IGLV4-69A0A075B6H9 119 aa8.21□□□□□ -1.1
NIF3L1-201ENST00000359683 PSCAO43653 123 aa8.21□□□□□ -1.1
NIF3L1-201ENST00000359683 C3orf79P0CE67 100 aa8.21□□□□□ -1.1
NIF3L1-201ENST00000359683 IGLC3P0DOY3 106 aa8.21□□□□□ -1.1
NIF3L1-201ENST00000359683 HERVK_113P63121 156 aa8.21□□□□□ -1.1
NIF3L1-201ENST00000359683 DNAH17Q9UFH2 4485 aa8.2□□□□□ -1.1
NIF3L1-201ENST00000359683 F8VRH5 84 aa8.2□□□□□ -1.1
NIF3L1-201ENST00000359683 PET117Q6UWS5 81 aa8.2□□□□□ -1.1
NIF3L1-201ENST00000359683 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-201ENST00000359683 MRPL35Q9NZE8 188 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-201ENST00000359683 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 LOC105371267A0A1B0GV96 52 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 H0Y8G0 127 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 COX7A2LO14548 114 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 C5orf38Q86SI9 138 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 HERC2O95714 4834 aa8.19□□□□□ -1.1
NIF3L1-201ENST00000359683 A0A087WZ39 114 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 KRTDAPP60985 99 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 LINC01561Q8N1V8 128 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 CDKN2A-AS1Q9UH64 79 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 LINC01545Q5VT33 79 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 CHAC1Q9BUX1 264 aa8.18□□□□□ -1.1
NIF3L1-201ENST00000359683 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
NIF3L1-201ENST00000359683 A0A087WTM6 91 aa8.17□□□□□ -1.1
NIF3L1-201ENST00000359683 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
NIF3L1-201ENST00000359683 WFDC2Q14508 124 aa8.17□□□□□ -1.1
NIF3L1-201ENST00000359683 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
NIF3L1-201ENST00000359683 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
NIF3L1-201ENST00000359683 USP17L23D6RBM5 183 aa8.16□□□□□ -1.1
NIF3L1-201ENST00000359683 LINC00469Q8N7U9 141 aa8.16□□□□□ -1.1
NIF3L1-201ENST00000359683 PMCHL2Q9BQD1 86 aa8.16□□□□□ -1.1
NIF3L1-201ENST00000359683 IGHV1-58A0A0C4DH39 117 aa8.15□□□□□ -1.1
NIF3L1-201ENST00000359683 DPM2O94777 84 aa8.15□□□□□ -1.1
NIF3L1-201ENST00000359683 MALP21145 153 aa8.15□□□□□ -1.1
NIF3L1-201ENST00000359683 PLNP26678 52 aa8.15□□□□□ -1.1
NIF3L1-201ENST00000359683 C15orf56Q8N910 161 aa8.15□□□□□ -1.1
NIF3L1-201ENST00000359683 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
NIF3L1-201ENST00000359683 IGHV3-64A0A075B6Q5 118 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 LECT2O14960 151 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 APOMO95445 188 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 H3BRM9 83 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 IGKCP01834 107 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 C14orf177Q52M58 125 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 TMEM170BQ5T4T1 132 aa8.14□□□□□ -1.11
NIF3L1-201ENST00000359683 GVQW2A0A096LPI5 108 aaPredicted RBP8.13□□□□□ -1.11
NIF3L1-201ENST00000359683 C20orf202A1L168 122 aa8.13□□□□□ -1.11
NIF3L1-201ENST00000359683 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
NIF3L1-201ENST00000359683 FAT2Q9NYQ8 4349 aa8.13□□□□□ -1.11
NIF3L1-201ENST00000359683 TMEM223A0PJW6 202 aa8.12□□□□□ -1.11
NIF3L1-201ENST00000359683 Q8N814 137 aa8.12□□□□□ -1.11
NIF3L1-201ENST00000359683 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
NIF3L1-201ENST00000359683 SPINK8P0C7L1 97 aa8.11□□□□□ -1.11
NIF3L1-201ENST00000359683 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
NIF3L1-201ENST00000359683 HIGD2BQ4VC39 106 aa8.11□□□□□ -1.11
NIF3L1-201ENST00000359683 ORAOV1Q8WV07 137 aa8.11□□□□□ -1.11
NIF3L1-201ENST00000359683 AKR1D1P51857 326 aa8.11□□□□□ -1.11
NIF3L1-201ENST00000359683 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
NIF3L1-201ENST00000359683 hDV102S1A0JD36 115 aa8.1□□□□□ -1.11
NIF3L1-201ENST00000359683 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
NIF3L1-201ENST00000359683 NTN5Q8WTR8 489 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-201ENST00000359683 SLPIP03973 132 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms