RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 LINC00469Q8N7U9 141 aa16.76■□□□□ 0.27
SHARPIN-201ENST00000359551 UBE2WQ96B02 151 aa16.76■□□□□ 0.27
SHARPIN-201ENST00000359551 IGHV3OR16-9A0A0B4J2B5 98 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 TMEM223A0PJW6 202 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 C3orf84H3BNL1 204 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 MIAQ16674 131 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 SPATA45Q537H7 98 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 TRAV8-4A0A0B4J246 113 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 CASC10Q5T4H9 136 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 C10orf126Q8N4M7 172 aa16.75■□□□□ 0.27
SHARPIN-201ENST00000359551 IBA57-AS1B1ANH7 110 aa16.74■□□□□ 0.27
SHARPIN-201ENST00000359551 CHCHD10Q8WYQ3 142 aaPredicted RBP16.74■□□□□ 0.27
SHARPIN-201ENST00000359551 H3BRM9 83 aa16.72■□□□□ 0.27
SHARPIN-201ENST00000359551 CD164L2Q6UWJ8 174 aa16.72■□□□□ 0.27
SHARPIN-201ENST00000359551 E9PLD3 99 aa16.72■□□□□ 0.27
SHARPIN-201ENST00000359551 XCL1P47992 114 aa16.72■□□□□ 0.27
SHARPIN-201ENST00000359551 HERVK_113P61574 105 aa16.72■□□□□ 0.27
SHARPIN-201ENST00000359551 IGLV10-54A0A075B6I4 117 aa16.71■□□□□ 0.27
SHARPIN-201ENST00000359551 A0A087WZ39 114 aa16.69■□□□□ 0.26
SHARPIN-201ENST00000359551 IGKV2D-26A0A0A0MRZ7 120 aa16.69■□□□□ 0.26
SHARPIN-201ENST00000359551 VPS13DQ5THJ4 4388 aa16.69■□□□□ 0.26
SHARPIN-201ENST00000359551 LYSTQ99698 3801 aa16.69■□□□□ 0.26
SHARPIN-201ENST00000359551 FOXI1Q12951 378 aa16.68■□□□□ 0.26
SHARPIN-201ENST00000359551 KRTAP26-1Q6PEX3 210 aa16.68■□□□□ 0.26
SHARPIN-201ENST00000359551 TRAV8-3A0A0A6YYJ7 113 aa16.67■□□□□ 0.26
SHARPIN-201ENST00000359551 SMIM1B2RUZ4 78 aa16.67■□□□□ 0.26
SHARPIN-201ENST00000359551 SPINK8P0C7L1 97 aa16.67■□□□□ 0.26
SHARPIN-201ENST00000359551 LINC01561Q8N1V8 128 aa16.67■□□□□ 0.26
SHARPIN-201ENST00000359551 DNAH1Q9P2D7 4330 aa16.67■□□□□ 0.26
SHARPIN-201ENST00000359551 IGHV1-58A0A0C4DH39 117 aa16.66■□□□□ 0.26
SHARPIN-201ENST00000359551 KRTAP1-5Q9BYS1 174 aa16.66■□□□□ 0.26
SHARPIN-201ENST00000359551 IGLV5-39A0A0G2JS06 123 aa16.65■□□□□ 0.26
SHARPIN-201ENST00000359551 GAGE12HA6NDE8 117 aa16.65■□□□□ 0.26
SHARPIN-201ENST00000359551 C5orf38Q86SI9 138 aa16.65■□□□□ 0.26
SHARPIN-201ENST00000359551 LEPROTO15243 131 aa16.65■□□□□ 0.26
SHARPIN-201ENST00000359551 NMUP48645 174 aa16.64■□□□□ 0.25
SHARPIN-201ENST00000359551 C1orf43Q9BWL3 253 aa16.64■□□□□ 0.25
SHARPIN-201ENST00000359551 COX7A2LO14548 114 aa16.63■□□□□ 0.25
SHARPIN-201ENST00000359551 IGHV3-64A0A075B6Q5 118 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 COX8AP10176 69 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 PLEKHB2Q96CS7 222 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 PRO1933Q9H354 126 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 TTC32Q5I0X7 151 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 C14orf144Q96I85 54 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 Q9HAA7 133 aa16.62■□□□□ 0.25
SHARPIN-201ENST00000359551 NBDYA0A0U1RRE5 68 aa16.61■□□□□ 0.25
SHARPIN-201ENST00000359551 TSPEAR-AS2P59090 65 aa16.61■□□□□ 0.25
SHARPIN-201ENST00000359551 PCP2Q8IVA1 136 aa16.61■□□□□ 0.25
SHARPIN-201ENST00000359551 IGKV2D-24A0A075B6R9 120 aa16.6■□□□□ 0.25
SHARPIN-201ENST00000359551 J3QQQ9 107 aa16.6■□□□□ 0.25
SHARPIN-201ENST00000359551 RMI2Q96E14 147 aa16.59■□□□□ 0.25
SHARPIN-201ENST00000359551 TSTD3H0UI37 97 aa16.59■□□□□ 0.25
SHARPIN-201ENST00000359551 BOD1L2Q8IYS8 172 aa16.59■□□□□ 0.25
SHARPIN-201ENST00000359551 TTTY13Q9BZ97 58 aa16.59■□□□□ 0.25
SHARPIN-201ENST00000359551 DLEU1O43261 78 aa16.58■□□□□ 0.24
SHARPIN-201ENST00000359551 LINC00476Q8WZB0 136 aa16.57■□□□□ 0.24
SHARPIN-201ENST00000359551 UQCR10Q9UDW1 63 aa16.56■□□□□ 0.24
SHARPIN-201ENST00000359551 LGALS3P17931 250 aaKnown RBP16.56■□□□□ 0.24
SHARPIN-201ENST00000359551 MALP21145 153 aa16.56■□□□□ 0.24
SHARPIN-201ENST00000359551 SLC25A34Q6PIV7 304 aa16.56■□□□□ 0.24
SHARPIN-201ENST00000359551 MAPKAPK5-AS1Q8N8E1 139 aa16.56■□□□□ 0.24
SHARPIN-201ENST00000359551 MIEN1Q9BRT3 115 aa16.54■□□□□ 0.24
SHARPIN-201ENST00000359551 TP73-AS1Q9UF72 201 aa16.54■□□□□ 0.24
SHARPIN-201ENST00000359551 COX11Q9Y6N1 276 aa16.54■□□□□ 0.24
SHARPIN-201ENST00000359551 APOMO95445 188 aa16.53■□□□□ 0.24
SHARPIN-201ENST00000359551 COX7B2Q8TF08 81 aa16.53■□□□□ 0.24
SHARPIN-201ENST00000359551 ALMS1Q8TCU4 4167 aa16.52■□□□□ 0.24
SHARPIN-201ENST00000359551 MYMXA0A1B0GTQ4 84 aa16.52■□□□□ 0.23
SHARPIN-201ENST00000359551 LY6G6CO95867 125 aa16.52■□□□□ 0.23
SHARPIN-201ENST00000359551 Q8IZM0 81 aa16.52■□□□□ 0.23
SHARPIN-201ENST00000359551 ZNF815PA8K554 130 aa16.51■□□□□ 0.23
SHARPIN-201ENST00000359551 ORAOV1Q8WV07 137 aa16.51■□□□□ 0.23
SHARPIN-201ENST00000359551 Q6ZR54 194 aa16.5■□□□□ 0.23
SHARPIN-201ENST00000359551 TM2D2Q9BX73 214 aa16.5■□□□□ 0.23
SHARPIN-201ENST00000359551 KIAA0087Q14695 138 aa16.5■□□□□ 0.23
SHARPIN-201ENST00000359551 TOMM7Q9P0U1 55 aa16.5■□□□□ 0.23
SHARPIN-201ENST00000359551 NDUFA12Q9UI09 145 aa16.5■□□□□ 0.23
SHARPIN-201ENST00000359551 NDUFA1O15239 70 aa16.49■□□□□ 0.23
SHARPIN-201ENST00000359551 ZNF625Q96I27 306 aaPredicted RBP16.48■□□□□ 0.23
SHARPIN-201ENST00000359551 C15orf56Q8N910 161 aa16.47■□□□□ 0.23
SHARPIN-201ENST00000359551 DNAH6Q9C0G6 4158 aa16.46■□□□□ 0.23
SHARPIN-201ENST00000359551 PRSS2P07478 247 aa16.46■□□□□ 0.23
SHARPIN-201ENST00000359551 C2orf91Q6ZV80 131 aa16.46■□□□□ 0.23
SHARPIN-201ENST00000359551 C6orf226Q5I0X4 101 aa16.45■□□□□ 0.22
SHARPIN-201ENST00000359551 M0R2N4 97 aa16.44■□□□□ 0.22
SHARPIN-201ENST00000359551 DDTP30046 118 aa16.44■□□□□ 0.22
SHARPIN-201ENST00000359551 SPAG11BQ08648 103 aa16.44■□□□□ 0.22
SHARPIN-201ENST00000359551 CFAP161Q6P656 301 aa16.43■□□□□ 0.22
SHARPIN-201ENST00000359551 SFTA2Q6UW10 78 aa16.43■□□□□ 0.22
SHARPIN-201ENST00000359551 Q6ZRN7 208 aaPredicted RBP16.43■□□□□ 0.22
SHARPIN-201ENST00000359551 HIGD1BQ9P298 99 aa16.43■□□□□ 0.22
SHARPIN-201ENST00000359551 GVQW2A0A096LPI5 108 aaPredicted RBP16.42■□□□□ 0.22
SHARPIN-201ENST00000359551 CXCL5P42830 114 aa16.42■□□□□ 0.22
SHARPIN-201ENST00000359551 A0A0J9YXY3 114 aa16.41■□□□□ 0.22
SHARPIN-201ENST00000359551 HNRNPA3P51991 378 aaKnown RBP16.41■□□□□ 0.22
SHARPIN-201ENST00000359551 HERV-K104P63124 156 aa16.41■□□□□ 0.22
SHARPIN-201ENST00000359551 PCP4L1A6NKN8 68 aa16.4■□□□□ 0.22
SHARPIN-201ENST00000359551 USP17L23D6RBM5 183 aa16.4■□□□□ 0.22
SHARPIN-201ENST00000359551 SCGB1D4Q6XE38 83 aa16.4■□□□□ 0.22
SHARPIN-201ENST00000359551 NTN5Q8WTR8 489 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms