RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 C2orf48Q96LS8 159 aa12.96□□□□□ -0.33
PPP1CA-202ENST00000358239 IFITM10A6NMD0 228 aa12.95□□□□□ -0.34
PPP1CA-202ENST00000358239 C5orf38Q86SI9 138 aa12.95□□□□□ -0.34
PPP1CA-202ENST00000358239 Q8N8P6 123 aa12.95□□□□□ -0.34
PPP1CA-202ENST00000358239 OR10D4PQ8NGN7 298 aa12.95□□□□□ -0.34
PPP1CA-202ENST00000358239 LRP1Q07954 4544 aaKnown RBP12.95□□□□□ -0.34
PPP1CA-202ENST00000358239 TRAV9-1A0A075B6T8 112 aa12.94□□□□□ -0.34
PPP1CA-202ENST00000358239 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
PPP1CA-202ENST00000358239 STPG4Q8N801 248 aa12.94□□□□□ -0.34
PPP1CA-202ENST00000358239 CAMK2N2Q96S95 79 aa12.94□□□□□ -0.34
PPP1CA-202ENST00000358239 OPRPNQ99935 248 aaPredicted RBP12.94□□□□□ -0.34
PPP1CA-202ENST00000358239 SEC11CQ9BY50 192 aa12.94□□□□□ -0.34
PPP1CA-202ENST00000358239 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
PPP1CA-202ENST00000358239 LOC107984640A0A0U1RRK4 108 aa12.92□□□□□ -0.34
PPP1CA-202ENST00000358239 ORMDL2Q53FV1 153 aa12.92□□□□□ -0.34
PPP1CA-202ENST00000358239 TMEM141Q96I45 108 aa12.92□□□□□ -0.34
PPP1CA-202ENST00000358239 CYSLTR1Q9Y271 337 aa12.92□□□□□ -0.34
PPP1CA-202ENST00000358239 F8WDY8 70 aa12.91□□□□□ -0.34
PPP1CA-202ENST00000358239 SPAG11BQ08648 103 aa12.91□□□□□ -0.34
PPP1CA-202ENST00000358239 Q6ZRU5 148 aa12.91□□□□□ -0.34
PPP1CA-202ENST00000358239 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
PPP1CA-202ENST00000358239 FAT3Q8TDW7 4589 aa12.91□□□□□ -0.34
PPP1CA-202ENST00000358239 IGLV4-3A0A075B6K6 122 aa12.9□□□□□ -0.34
PPP1CA-202ENST00000358239 TGIF2-C20orf24A0A0A6YYL0 155 aa12.9□□□□□ -0.34
PPP1CA-202ENST00000358239 NPSP0C0P6 89 aa12.9□□□□□ -0.34
PPP1CA-202ENST00000358239 G0S2P27469 103 aa12.89□□□□□ -0.35
PPP1CA-202ENST00000358239 HNRNPA3P51991 378 aaKnown RBP12.89□□□□□ -0.35
PPP1CA-202ENST00000358239 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
PPP1CA-202ENST00000358239 C2orf66Q6UXQ4 117 aa12.89□□□□□ -0.35
PPP1CA-202ENST00000358239 TEX43Q6ZNM6 134 aa12.89□□□□□ -0.35
PPP1CA-202ENST00000358239 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
PPP1CA-202ENST00000358239 S100PP25815 95 aa12.88□□□□□ -0.35
PPP1CA-202ENST00000358239 RNF151Q2KHN1 245 aa12.88□□□□□ -0.35
PPP1CA-202ENST00000358239 Q6ZN92 141 aa12.88□□□□□ -0.35
PPP1CA-202ENST00000358239 COMMD7Q86VX2 200 aa12.88□□□□□ -0.35
PPP1CA-202ENST00000358239 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
PPP1CA-202ENST00000358239 A0A087WZ39 114 aa12.86□□□□□ -0.35
PPP1CA-202ENST00000358239 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
PPP1CA-202ENST00000358239 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
PPP1CA-202ENST00000358239 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
PPP1CA-202ENST00000358239 NDUFA1O15239 70 aa12.84□□□□□ -0.35
PPP1CA-202ENST00000358239 COX19Q49B96 90 aa12.84□□□□□ -0.35
PPP1CA-202ENST00000358239 PAPPA-AS1Q5QFB9 102 aa12.84□□□□□ -0.35
PPP1CA-202ENST00000358239 C10orf91Q5T1B1 145 aa12.84□□□□□ -0.35
PPP1CA-202ENST00000358239 GNB1LQ9BYB4 327 aa12.84□□□□□ -0.35
PPP1CA-202ENST00000358239 VCX2Q9H322 139 aa12.84□□□□□ -0.35
PPP1CA-202ENST00000358239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.83□□□□□ -0.36
PPP1CA-202ENST00000358239 UBE2D1P51668 147 aa12.83□□□□□ -0.36
PPP1CA-202ENST00000358239 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
PPP1CA-202ENST00000358239 LINC01561Q8N1V8 128 aa12.83□□□□□ -0.36
PPP1CA-202ENST00000358239 AMELXQ99217 191 aa12.83□□□□□ -0.36
PPP1CA-202ENST00000358239 IGIPA6NJ69 53 aa12.82□□□□□ -0.36
PPP1CA-202ENST00000358239 RHEBQ15382 184 aa12.82□□□□□ -0.36
PPP1CA-202ENST00000358239 RPL18AQ02543 176 aaKnown RBP12.81□□□□□ -0.36
PPP1CA-202ENST00000358239 KIAA1644Q3SXP7 199 aa12.81□□□□□ -0.36
PPP1CA-202ENST00000358239 LINC00173Q6ZV60 143 aa12.81□□□□□ -0.36
PPP1CA-202ENST00000358239 CARHSP1Q9Y2V2 147 aaKnown RBP12.81□□□□□ -0.36
PPP1CA-202ENST00000358239 MT-ND6P03923 174 aa12.8□□□□□ -0.36
PPP1CA-202ENST00000358239 FAM19A3Q7Z5A8 133 aa12.8□□□□□ -0.36
PPP1CA-202ENST00000358239 TIMM17AQ99595 171 aa12.8□□□□□ -0.36
PPP1CA-202ENST00000358239 LINC01549A6NIU2 74 aa12.79□□□□□ -0.36
PPP1CA-202ENST00000358239 SEC11AP67812 179 aa12.79□□□□□ -0.36
PPP1CA-202ENST00000358239 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
PPP1CA-202ENST00000358239 A0A0J9YXV3 536 aa12.78□□□□□ -0.36
PPP1CA-202ENST00000358239 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
PPP1CA-202ENST00000358239 KIAA0087Q14695 138 aa12.77□□□□□ -0.37
PPP1CA-202ENST00000358239 SERTAD4-AS1Q5TG53 156 aa12.77□□□□□ -0.37
PPP1CA-202ENST00000358239 Q6ZRP5 223 aa12.77□□□□□ -0.37
PPP1CA-202ENST00000358239 ALKBH7Q9BT30 221 aaPredicted RBP12.77□□□□□ -0.37
PPP1CA-202ENST00000358239 TRBV30A0A0K0K1B3 111 aa12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 HERVK_113P63121 156 aa12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 C9orf116Q5BN46 136 aaPredicted RBP12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 UNQ6190/PRO20217Q6UXQ8 127 aa12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 ERASQ7Z444 233 aa12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 RPS10P5Q9NQ39 176 aa12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
PPP1CA-202ENST00000358239 A0A1W2PNN7 141 aa12.75□□□□□ -0.37
PPP1CA-202ENST00000358239 LINC01546A6NGU7 62 aa12.75□□□□□ -0.37
PPP1CA-202ENST00000358239 C10orf25Q5T742 122 aa12.75□□□□□ -0.37
PPP1CA-202ENST00000358239 ZC2HC1BQ5TFG8 222 aa12.75□□□□□ -0.37
PPP1CA-202ENST00000358239 MRPL18Q9H0U6 180 aaKnown RBP12.74□□□□□ -0.37
PPP1CA-202ENST00000358239 SCGB3A1Q96QR1 104 aa12.73□□□□□ -0.37
PPP1CA-202ENST00000358239 PRSS2P07478 247 aa12.72□□□□□ -0.37
PPP1CA-202ENST00000358239 FABP9Q0Z7S8 132 aa12.72□□□□□ -0.37
PPP1CA-202ENST00000358239 SPINK6Q6UWN8 80 aa12.72□□□□□ -0.37
PPP1CA-202ENST00000358239 PACRGQ96M98 296 aaPredicted RBP12.72□□□□□ -0.37
PPP1CA-202ENST00000358239 GEMIN7Q9H840 131 aaKnown RBP12.72□□□□□ -0.37
PPP1CA-202ENST00000358239 Q8IZM0 81 aa12.71□□□□□ -0.37
PPP1CA-202ENST00000358239 CKS1BP61024 79 aa12.7□□□□□ -0.38
PPP1CA-202ENST00000358239 C2orf82Q6UX34 121 aa12.7□□□□□ -0.38
PPP1CA-202ENST00000358239 FA2HQ7L5A8 372 aa12.7□□□□□ -0.38
PPP1CA-202ENST00000358239 SMCO4Q9NRQ5 59 aa12.7□□□□□ -0.38
PPP1CA-202ENST00000358239 NDUFC2-KCTD14E9PQ53 114 aa12.69□□□□□ -0.38
PPP1CA-202ENST00000358239 NDUFA5Q16718 116 aa12.69□□□□□ -0.38
PPP1CA-202ENST00000358239 MT1HL1P0DM35 61 aa12.68□□□□□ -0.38
PPP1CA-202ENST00000358239 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
PPP1CA-202ENST00000358239 TOMM7Q9P0U1 55 aa12.68□□□□□ -0.38
PPP1CA-202ENST00000358239 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
PPP1CA-202ENST00000358239 SNAPINO95295 136 aa12.67□□□□□ -0.38
PPP1CA-202ENST00000358239 APOC3P02656 99 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms