RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 A0A0J9YXV3 536 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 A8MZ25 164 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 ATP6V0E1O15342 81 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHV1-69P01742 117 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 IGHG2P01859 326 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 INAFM2P0DMQ5 153 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 WFDC9Q8NEX5 89 aa6.78□□□□□ -1.32
SMARCAL1-202ENST00000358207 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 IGHV3-66A0A0C4DH42 116 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 IGHV4-59P01825 116 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBMY1A1P0DJD3 496 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBMY1CP0DJD4 496 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 PMAIP1Q13794 54 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 TRBV12-3P01733 135 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 Q8N9W7 124 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 ZFAND3Q9H8U3 227 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 CMYA5Q8N3K9 4069 aa6.77□□□□□ -1.33
SMARCAL1-202ENST00000358207 IGHV7-81A0A0B4J1V7 117 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 IGHV3-11P01762 117 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 C10orf99Q6UWK7 81 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 Q9HAA7 133 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 FBN1P35555 2871 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 CCKP06307 115 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 POLR2KP53803 58 aaKnown RBP6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 DEFB112Q30KQ8 113 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 FAM222AQ5U5X8 452 aa6.76□□□□□ -1.33
SMARCAL1-202ENST00000358207 PRR9Q5T870 116 aa6.75□□□□□ -1.33
SMARCAL1-202ENST00000358207 TENM1Q9UKZ4 2725 aa6.75□□□□□ -1.33
SMARCAL1-202ENST00000358207 TRBV7-6A0A0J9YX20 115 aa6.75□□□□□ -1.33
SMARCAL1-202ENST00000358207 DNAL4O96015 105 aa6.75□□□□□ -1.33
SMARCAL1-202ENST00000358207 VWFP04275 2813 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 TIMM17BO60830 172 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 C11orf44Q8N8P7 122 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 NDUFA12Q9UI09 145 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 IGF1P05019 195 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 MINOS1Q5TGZ0 78 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 MINOS1-NBL1R4GNA1 71 aa6.74□□□□□ -1.33
SMARCAL1-202ENST00000358207 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 LINC00315P59091 139 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 MUC4Q99102 2169 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 F8W735 103 aaPredicted RBP6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 C15orf32Q32M92 178 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 RMI2Q96E14 147 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 HOXD3P31249 432 aaPredicted RBP6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 CLEC19AQ6UXS0 136 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
SMARCAL1-202ENST00000358207 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
SMARCAL1-202ENST00000358207 CLPSL1A2RUU4 121 aa6.72□□□□□ -1.33
SMARCAL1-202ENST00000358207 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
SMARCAL1-202ENST00000358207 Q8N6K4 173 aa6.72□□□□□ -1.33
SMARCAL1-202ENST00000358207 NPBQ8NG41 125 aa6.72□□□□□ -1.33
SMARCAL1-202ENST00000358207 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.33
SMARCAL1-202ENST00000358207 MRPS36P82909 103 aaKnown RBP6.71□□□□□ -1.33
SMARCAL1-202ENST00000358207 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.33
SMARCAL1-202ENST00000358207 C5orf56Q8N8D9 126 aa6.71□□□□□ -1.33
SMARCAL1-202ENST00000358207 F8WEM9 126 aa6.71□□□□□ -1.34
SMARCAL1-202ENST00000358207 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
SMARCAL1-202ENST00000358207 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
SMARCAL1-202ENST00000358207 KIF25-AS1Q9Y6Z4 181 aa6.71□□□□□ -1.34
SMARCAL1-202ENST00000358207 STAB1Q9NY15 2570 aa6.71□□□□□ -1.34
SMARCAL1-202ENST00000358207 IGHV4OR15-8A0A075B7B6 117 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 A0A087WW49 117 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 VCYO14598 125 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 KLKP1Q107X0 134 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.7□□□□□ -1.34
SMARCAL1-202ENST00000358207 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 SUMO4Q6EEV6 95 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 FAM104AQ969W3 186 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 MOB4Q9Y3A3 225 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 PPP1R17O96001 155 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 KHDC1LQ5JSQ8 128 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 ENHOQ6UWT2 76 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 VSIG2Q96IQ7 327 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 NBEAL2Q6ZNJ1 2754 aa6.69□□□□□ -1.34
SMARCAL1-202ENST00000358207 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 IGLV11-55A0A075B6I3 123 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 GNRH2O43555 120 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 S100A4P26447 101 aaKnown RBP6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 CD164Q04900 197 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 Q6ZRU5 148 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 LINC00308Q8TCZ7 52 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 ZNF625Q96I27 306 aaPredicted RBP6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 RNF5Q99942 180 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 TRRAPQ9Y4A5 3859 aa6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 RNASE3P12724 160 aaKnown RBP6.68□□□□□ -1.34
SMARCAL1-202ENST00000358207 NCR3O14931 201 aa6.67□□□□□ -1.34
SMARCAL1-202ENST00000358207 PAX4O43316 350 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms