RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 PIP4P1Q86T03 277 aa8.14□□□□□ -1.11
GTF3C1-201ENST00000356183 OTOGLQ3ZCN5 2332 aa8.14□□□□□ -1.11
GTF3C1-201ENST00000356183 A0A087WYN8 130 aa8.14□□□□□ -1.11
GTF3C1-201ENST00000356183 PTPN13Q12923 2485 aa8.14□□□□□ -1.11
GTF3C1-201ENST00000356183 LTBP2Q14767 1821 aa8.14□□□□□ -1.11
GTF3C1-201ENST00000356183 UBE2D2P62837 147 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 GAS8-AS1O95177 125 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 HILS1P60008 231 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 DEFB114Q30KQ6 69 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 SPINK1P00995 79 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 K7EQG2 157 aa8.13□□□□□ -1.11
GTF3C1-201ENST00000356183 HCFC1P51610 2035 aa8.12□□□□□ -1.11
GTF3C1-201ENST00000356183 CSPG4Q6UVK1 2322 aa8.12□□□□□ -1.11
GTF3C1-201ENST00000356183 ZNF73O43830 326 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-201ENST00000356183 MSMPQ1L6U9 139 aa8.12□□□□□ -1.11
GTF3C1-201ENST00000356183 TRBV7-7A0A0K0K1E9 115 aa8.12□□□□□ -1.11
GTF3C1-201ENST00000356183 CD164L2Q6UWJ8 174 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 IGHV6-1A0A0B4J1U7 121 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 ODF3BA8MYP8 253 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 ACACBO00763 2458 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
GTF3C1-201ENST00000356183 IGLV4-69A0A075B6H9 119 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 IGFL2Q6UWQ7 119 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 COX17Q14061 63 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 PRR9Q5T870 116 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 Q8N814 137 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 LINC01547P58512 204 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
GTF3C1-201ENST00000356183 RNASE3P12724 160 aaKnown RBP8.09□□□□□ -1.11
GTF3C1-201ENST00000356183 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
GTF3C1-201ENST00000356183 DSCAMO60469 2012 aa8.09□□□□□ -1.11
GTF3C1-201ENST00000356183 H0Y9P7 68 aa8.09□□□□□ -1.11
GTF3C1-201ENST00000356183 PRR3P79522 188 aaKnown RBP8.09□□□□□ -1.11
GTF3C1-201ENST00000356183 C10orf99Q6UWK7 81 aa8.09□□□□□ -1.11
GTF3C1-201ENST00000356183 EML5Q05BV3 1969 aa8.08□□□□□ -1.12
GTF3C1-201ENST00000356183 CENPFP49454 3210 aa8.08□□□□□ -1.12
GTF3C1-201ENST00000356183 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
GTF3C1-201ENST00000356183 Q9UF83 564 aa8.08□□□□□ -1.12
GTF3C1-201ENST00000356183 COX6A2Q02221 97 aa8.08□□□□□ -1.12
GTF3C1-201ENST00000356183 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
GTF3C1-201ENST00000356183 SONP18583 2426 aaKnown RBP8.07□□□□□ -1.12
GTF3C1-201ENST00000356183 Q6YL49 198 aa8.07□□□□□ -1.12
GTF3C1-201ENST00000356183 WISP2O76076 250 aa8.07□□□□□ -1.12
GTF3C1-201ENST00000356183 CUL9Q8IWT3 2517 aa8.06□□□□□ -1.12
GTF3C1-201ENST00000356183 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
GTF3C1-201ENST00000356183 ANKHD1Q8IWZ3 2542 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-201ENST00000356183 C1orf137Q5JT78 98 aa8.06□□□□□ -1.12
GTF3C1-201ENST00000356183 C11orf21Q9P2W6 132 aa8.06□□□□□ -1.12
GTF3C1-201ENST00000356183 TNFRSF13BO14836 293 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-201ENST00000356183 C18orf65Q6ZTR6 163 aa8.05□□□□□ -1.12
GTF3C1-201ENST00000356183 Q8N3U1 123 aa8.05□□□□□ -1.12
GTF3C1-201ENST00000356183 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
GTF3C1-201ENST00000356183 KPRPQ5T749 579 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-201ENST00000356183 DAZAP2Q15038 168 aaPredicted RBP8.04□□□□□ -1.12
GTF3C1-201ENST00000356183 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
GTF3C1-201ENST00000356183 CYSRT1A8MQ03 144 aa8.04□□□□□ -1.12
GTF3C1-201ENST00000356183 LINC00575Q6W349 94 aa8.04□□□□□ -1.12
GTF3C1-201ENST00000356183 REG3GQ6UW15 175 aa8.04□□□□□ -1.12
GTF3C1-201ENST00000356183 NOTCH2Q04721 2471 aa8.04□□□□□ -1.12
GTF3C1-201ENST00000356183 Q8IZM0 81 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 SORL1Q92673 2214 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 LELP1Q5T871 98 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 SBSPONQ8IVN8 264 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 C4orf26Q17RF5 130 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
GTF3C1-201ENST00000356183 CDIP1Q9H305 208 aa8.02□□□□□ -1.12
GTF3C1-201ENST00000356183 TRAV10A0A0B4J240 114 aa8.02□□□□□ -1.13
GTF3C1-201ENST00000356183 A0A096LNJ9 63 aa8.01□□□□□ -1.13
GTF3C1-201ENST00000356183 ATG2AQ2TAZ0 1938 aa8.01□□□□□ -1.13
GTF3C1-201ENST00000356183 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
GTF3C1-201ENST00000356183 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
GTF3C1-201ENST00000356183 LMO4P61968 165 aa8.01□□□□□ -1.13
GTF3C1-201ENST00000356183 IGIPA6NJ69 53 aa8□□□□□ -1.13
GTF3C1-201ENST00000356183 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
GTF3C1-201ENST00000356183 RPL28P46779 137 aaKnown RBP8□□□□□ -1.13
GTF3C1-201ENST00000356183 SPAG11AQ6PDA7 123 aa8□□□□□ -1.13
GTF3C1-201ENST00000356183 PIEZO2Q9H5I5 2752 aa8□□□□□ -1.13
GTF3C1-201ENST00000356183 ARHGAP32A7KAX9 2087 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 LY6G6CO95867 125 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 INAFM1C9JVW0 142 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 C19orf84I3L1E1 186 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 Q9BRP9 147 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 ZNF580Q9UK33 172 aa7.99□□□□□ -1.13
GTF3C1-201ENST00000356183 TMEM254Q8TBM7 123 aa7.98□□□□□ -1.13
GTF3C1-201ENST00000356183 PRO0628Q9UI54 55 aa7.98□□□□□ -1.13
GTF3C1-201ENST00000356183 PRLHP81277 87 aa7.98□□□□□ -1.13
GTF3C1-201ENST00000356183 EDN2P20800 178 aa7.97□□□□□ -1.13
GTF3C1-201ENST00000356183 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
GTF3C1-201ENST00000356183 CACNA1AO00555 2505 aa7.97□□□□□ -1.13
GTF3C1-201ENST00000356183 C6orf223Q8N319 242 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms