RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 FUSP35637 526 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 TOMM6Q96B49 74 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
PDLIM7-202ENST00000355841 ZC2HC1BQ5TFG8 222 aa11.83□□□□□ -0.52
PDLIM7-202ENST00000355841 CHCHD1Q96BP2 118 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-202ENST00000355841 IGIPA6NJ69 53 aa11.82□□□□□ -0.52
PDLIM7-202ENST00000355841 XCL1P47992 114 aa11.82□□□□□ -0.52
PDLIM7-202ENST00000355841 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 SPATA45Q537H7 98 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 UQCR10Q9UDW1 63 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 A0A096LNJ9 63 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 CCL25O15444 150 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 SCGB3A1Q96QR1 104 aa11.81□□□□□ -0.52
PDLIM7-202ENST00000355841 G0S2P27469 103 aa11.8□□□□□ -0.52
PDLIM7-202ENST00000355841 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
PDLIM7-202ENST00000355841 FAM19A2Q8N3H0 131 aa11.8□□□□□ -0.52
PDLIM7-202ENST00000355841 PKHD1P08F94 4074 aa11.8□□□□□ -0.52
PDLIM7-202ENST00000355841 SS18Q15532 418 aa11.79□□□□□ -0.52
PDLIM7-202ENST00000355841 SPATA12Q7Z6I5 190 aa11.79□□□□□ -0.52
PDLIM7-202ENST00000355841 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
PDLIM7-202ENST00000355841 ERASQ7Z444 233 aa11.78□□□□□ -0.52
PDLIM7-202ENST00000355841 FOXI1Q12951 378 aa11.78□□□□□ -0.52
PDLIM7-202ENST00000355841 TIMM17AQ99595 171 aa11.78□□□□□ -0.52
PDLIM7-202ENST00000355841 USP17L23D6RBM5 183 aa11.77□□□□□ -0.53
PDLIM7-202ENST00000355841 HBDP02042 147 aa11.77□□□□□ -0.53
PDLIM7-202ENST00000355841 Q6ZN92 141 aa11.77□□□□□ -0.53
PDLIM7-202ENST00000355841 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
PDLIM7-202ENST00000355841 Q8N814 137 aa11.77□□□□□ -0.53
PDLIM7-202ENST00000355841 VCX2Q9H322 139 aa11.77□□□□□ -0.53
PDLIM7-202ENST00000355841 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.75□□□□□ -0.53
PDLIM7-202ENST00000355841 AMELXQ99217 191 aa11.75□□□□□ -0.53
PDLIM7-202ENST00000355841 HNRNPA3P51991 378 aaKnown RBP11.75□□□□□ -0.53
PDLIM7-202ENST00000355841 COL5A1-AS1Q5SY13 56 aa11.75□□□□□ -0.53
PDLIM7-202ENST00000355841 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
PDLIM7-202ENST00000355841 NPSP0C0P6 89 aa11.73□□□□□ -0.53
PDLIM7-202ENST00000355841 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
PDLIM7-202ENST00000355841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.72□□□□□ -0.53
PDLIM7-202ENST00000355841 UBE2D1P51668 147 aa11.72□□□□□ -0.53
PDLIM7-202ENST00000355841 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
PDLIM7-202ENST00000355841 COX6A2Q02221 97 aa11.71□□□□□ -0.53
PDLIM7-202ENST00000355841 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.53
PDLIM7-202ENST00000355841 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
PDLIM7-202ENST00000355841 C15orf56Q8N910 161 aa11.71□□□□□ -0.53
PDLIM7-202ENST00000355841 LEPROTL1O95214 131 aa11.71□□□□□ -0.54
PDLIM7-202ENST00000355841 PRSS1P07477 247 aa11.71□□□□□ -0.54
PDLIM7-202ENST00000355841 PET117Q6UWS5 81 aa11.71□□□□□ -0.54
PDLIM7-202ENST00000355841 HSPB8Q9UJY1 196 aa11.71□□□□□ -0.54
PDLIM7-202ENST00000355841 SYS1-DBNDD2H3BUS1 97 aa11.7□□□□□ -0.54
PDLIM7-202ENST00000355841 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
PDLIM7-202ENST00000355841 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
PDLIM7-202ENST00000355841 DNAH5Q8TE73 4624 aa11.7□□□□□ -0.54
PDLIM7-202ENST00000355841 hDV102S1A0JD36 115 aa11.69□□□□□ -0.54
PDLIM7-202ENST00000355841 COX7A2LO14548 114 aa11.69□□□□□ -0.54
PDLIM7-202ENST00000355841 DLEU1O43261 78 aa11.69□□□□□ -0.54
PDLIM7-202ENST00000355841 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 IGHV3OR16-9A0A0B4J2B5 98 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 C16orf90A8MZG2 172 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 MAP1LC3CQ9BXW4 147 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 MALP21145 153 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 PMVKQ15126 192 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 C14orf177Q52M58 125 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
PDLIM7-202ENST00000355841 ATP5LO75964 103 aa11.67□□□□□ -0.54
PDLIM7-202ENST00000355841 BATFQ16520 125 aa11.67□□□□□ -0.54
PDLIM7-202ENST00000355841 LINC01620Q4KN68 170 aa11.67□□□□□ -0.54
PDLIM7-202ENST00000355841 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
PDLIM7-202ENST00000355841 NTN5Q8WTR8 489 aaPredicted RBP11.67□□□□□ -0.54
PDLIM7-202ENST00000355841 CFAP161Q6P656 301 aa11.66□□□□□ -0.54
PDLIM7-202ENST00000355841 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
PDLIM7-202ENST00000355841 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.55
PDLIM7-202ENST00000355841 HSBP1L1C9JCN9 74 aa11.65□□□□□ -0.55
PDLIM7-202ENST00000355841 SLPIP03973 132 aa11.65□□□□□ -0.55
PDLIM7-202ENST00000355841 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.55
PDLIM7-202ENST00000355841 MAJINQ3KP22 176 aa11.65□□□□□ -0.55
PDLIM7-202ENST00000355841 LINC01545Q5VT33 79 aa11.64□□□□□ -0.55
PDLIM7-202ENST00000355841 GEMIN7Q9H840 131 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-202ENST00000355841 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
PDLIM7-202ENST00000355841 FAM19A3Q7Z5A8 133 aa11.63□□□□□ -0.55
PDLIM7-202ENST00000355841 A0A087WZ39 114 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 H0Y8G0 127 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 STPG4Q8N801 248 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 HERVK_113P63121 156 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
PDLIM7-202ENST00000355841 BIRC6Q9NR09 4857 aa11.61□□□□□ -0.55
PDLIM7-202ENST00000355841 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
PDLIM7-202ENST00000355841 GCSHP23434 173 aa11.61□□□□□ -0.55
PDLIM7-202ENST00000355841 SEC11AP67812 179 aa11.61□□□□□ -0.55
PDLIM7-202ENST00000355841 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
PDLIM7-202ENST00000355841 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
PDLIM7-202ENST00000355841 SLC25A34Q6PIV7 304 aa11.6□□□□□ -0.55
PDLIM7-202ENST00000355841 PMCHL2Q9BQD1 86 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms