RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TRBV6-4A0A1B0GX49 114 aa8.94□□□□□ -0.98
COLCA1-201ENST00000355430 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
COLCA1-201ENST00000355430 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
COLCA1-201ENST00000355430 SORL1Q92673 2214 aa8.93□□□□□ -0.98
COLCA1-201ENST00000355430 JMJD7-PLA2G4BH0Y9G9 81 aa8.93□□□□□ -0.98
COLCA1-201ENST00000355430 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
COLCA1-201ENST00000355430 ADAMTSL4-AS1Q5T5F5 129 aa8.93□□□□□ -0.98
COLCA1-201ENST00000355430 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
COLCA1-201ENST00000355430 ZFYVE26Q68DK2 2539 aa8.92□□□□□ -0.98
COLCA1-201ENST00000355430 LINC00269Q8N2A0 174 aa8.92□□□□□ -0.98
COLCA1-201ENST00000355430 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
COLCA1-201ENST00000355430 CHCHD7Q9BUK0 85 aa8.92□□□□□ -0.98
COLCA1-201ENST00000355430 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
COLCA1-201ENST00000355430 KIF25-AS1Q9Y6Z4 181 aa8.91□□□□□ -0.98
COLCA1-201ENST00000355430 CITED1Q99966 193 aa8.91□□□□□ -0.98
COLCA1-201ENST00000355430 J3KT08 172 aa8.9□□□□□ -0.98
COLCA1-201ENST00000355430 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.98
COLCA1-201ENST00000355430 BRI3O95415 125 aa8.9□□□□□ -0.98
COLCA1-201ENST00000355430 COL27A1Q8IZC6 1860 aaPredicted RBP8.9□□□□□ -0.98
COLCA1-201ENST00000355430 TRBV6-8A0A0A6YYG3 113 aa8.9□□□□□ -0.99
COLCA1-201ENST00000355430 COX6A2Q02221 97 aa8.9□□□□□ -0.99
COLCA1-201ENST00000355430 B9D2Q9BPU9 175 aa8.9□□□□□ -0.99
COLCA1-201ENST00000355430 HIGD2BQ4VC39 106 aa8.89□□□□□ -0.99
COLCA1-201ENST00000355430 IBA57-AS1B1ANH7 110 aa8.89□□□□□ -0.99
COLCA1-201ENST00000355430 AMELXQ99217 191 aa8.89□□□□□ -0.99
COLCA1-201ENST00000355430 AGRNO00468 2067 aa8.89□□□□□ -0.99
COLCA1-201ENST00000355430 LINC00242Q5T6M2 205 aa8.89□□□□□ -0.99
COLCA1-201ENST00000355430 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
COLCA1-201ENST00000355430 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
COLCA1-201ENST00000355430 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
COLCA1-201ENST00000355430 Q6ZSN1 163 aa8.88□□□□□ -0.99
COLCA1-201ENST00000355430 UQCRQO14949 82 aa8.88□□□□□ -0.99
COLCA1-201ENST00000355430 C3orf22Q8N5N4 141 aa8.88□□□□□ -0.99
COLCA1-201ENST00000355430 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-201ENST00000355430 LRRK2Q5S007 2527 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-201ENST00000355430 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-201ENST00000355430 RETNQ9HD89 108 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 TRAV23DV6A0A075B6W5 121 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 LINC00315P59091 139 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 LELP1Q5T871 98 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
COLCA1-201ENST00000355430 SMIM11BQ8TCY0 68 aa8.86□□□□□ -0.99
COLCA1-201ENST00000355430 PRO0461Q9UI25 63 aa8.86□□□□□ -0.99
COLCA1-201ENST00000355430 FAM19A4Q96LR4 140 aa8.86□□□□□ -0.99
COLCA1-201ENST00000355430 hADV29S1A0JD25 119 aa8.86□□□□□ -0.99
COLCA1-201ENST00000355430 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
COLCA1-201ENST00000355430 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
COLCA1-201ENST00000355430 Q8N2B8 174 aa8.85□□□□□ -0.99
COLCA1-201ENST00000355430 DIRC1Q969H9 104 aa8.85□□□□□ -0.99
COLCA1-201ENST00000355430 Q6Q795 121 aa8.84□□□□□ -0.99
COLCA1-201ENST00000355430 ABCA12Q86UK0 2595 aa8.84□□□□□ -0.99
COLCA1-201ENST00000355430 LAMA2P24043 3122 aaKnown RBP8.84□□□□□ -0.99
COLCA1-201ENST00000355430 UPK3BQ9BT76 320 aa8.83□□□□□ -1
COLCA1-201ENST00000355430 A0A087WZ39 114 aa8.83□□□□□ -1
COLCA1-201ENST00000355430 LRCOL1A6NCL2 159 aa8.83□□□□□ -1
COLCA1-201ENST00000355430 RANBP2P49792 3224 aaKnown RBP8.83□□□□□ -1
COLCA1-201ENST00000355430 IMUPQ9GZP8 106 aa8.83□□□□□ -1
COLCA1-201ENST00000355430 LAMA3Q16787 3333 aa8.83□□□□□ -1
COLCA1-201ENST00000355430 MYO9AB2RTY4 2548 aa8.83□□□□□ -1
COLCA1-201ENST00000355430 PRRC2CQ9Y520 2896 aaKnown RBP8.83□□□□□ -1
COLCA1-201ENST00000355430 PKD1L2Q7Z442 2459 aa8.82□□□□□ -1
COLCA1-201ENST00000355430 FAM240AA0A1B0GVK7 77 aa8.82□□□□□ -1
COLCA1-201ENST00000355430 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
COLCA1-201ENST00000355430 ENHOQ6UWT2 76 aa8.82□□□□□ -1
COLCA1-201ENST00000355430 TRANK1O15050 2925 aa8.82□□□□□ -1
COLCA1-201ENST00000355430 SYCNQ0VAF6 134 aa8.81□□□□□ -1
COLCA1-201ENST00000355430 EPG5Q9HCE0 2579 aa8.81□□□□□ -1
COLCA1-201ENST00000355430 H3BQ85 93 aa8.8□□□□□ -1
COLCA1-201ENST00000355430 UNC80Q8N2C7 3258 aa8.8□□□□□ -1
COLCA1-201ENST00000355430 COX7BP24311 80 aa8.8□□□□□ -1
COLCA1-201ENST00000355430 C6orf99Q4VX62 202 aa8.8□□□□□ -1
COLCA1-201ENST00000355430 FUSP35637 526 aaKnown RBP eCLIP8.8□□□□□ -1
COLCA1-201ENST00000355430 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
COLCA1-201ENST00000355430 NREPQ16612 68 aa8.79□□□□□ -1
COLCA1-201ENST00000355430 M0QXV9 152 aa8.79□□□□□ -1
COLCA1-201ENST00000355430 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
COLCA1-201ENST00000355430 C1orf134Q5TEV5 83 aa8.79□□□□□ -1
COLCA1-201ENST00000355430 C2CD3Q4AC94 2353 aa8.79□□□□□ -1
COLCA1-201ENST00000355430 Q6ZTC4 211 aa8.78□□□□□ -1
COLCA1-201ENST00000355430 A0A087WYN8 130 aa8.78□□□□□ -1
COLCA1-201ENST00000355430 C20orf197Q8N268 126 aa8.78□□□□□ -1
COLCA1-201ENST00000355430 BEAN1Q3B7T3 259 aa8.78□□□□□ -1
COLCA1-201ENST00000355430 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
COLCA1-201ENST00000355430 IGLV4-60A0A075B6I1 120 aa8.77□□□□□ -1.01
COLCA1-201ENST00000355430 FHL3Q13643 280 aa8.77□□□□□ -1.01
COLCA1-201ENST00000355430 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
COLCA1-201ENST00000355430 USP9XQ93008 2570 aaPredicted RBP8.76□□□□□ -1.01
COLCA1-201ENST00000355430 COX7CP15954 63 aa8.76□□□□□ -1.01
COLCA1-201ENST00000355430 RPL28P46779 137 aaKnown RBP8.76□□□□□ -1.01
COLCA1-201ENST00000355430 XAGE1AQ9HD64 81 aa8.76□□□□□ -1.01
COLCA1-201ENST00000355430 USP17L23D6RBM5 183 aa8.76□□□□□ -1.01
COLCA1-201ENST00000355430 NDUFB1O75438 58 aa8.76□□□□□ -1.01
COLCA1-201ENST00000355430 WFDC9Q8NEX5 89 aa8.76□□□□□ -1.01
COLCA1-201ENST00000355430 HIGD2AQ9BW72 106 aa8.76□□□□□ -1.01
COLCA1-201ENST00000355430 PDE6GP18545 87 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 ATP5EP2Q5VTU8 51 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 TLN2Q9Y4G6 2542 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 CD164L2Q6UWJ8 174 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms