RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 IGKV2-28A0A075B6P5 120 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 FHL2Q14192 279 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 XIRP2A4UGR9 3374 aa6.99□□□□□ -1.29
GABPA-201ENST00000354828 FOXI1Q12951 378 aa6.98□□□□□ -1.29
GABPA-201ENST00000354828 CHCHD7Q9BUK0 85 aa6.98□□□□□ -1.29
GABPA-201ENST00000354828 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
GABPA-201ENST00000354828 IBA57-AS1B1ANH7 110 aa6.98□□□□□ -1.29
GABPA-201ENST00000354828 ZNF22P17026 224 aaPredicted RBP6.98□□□□□ -1.29
GABPA-201ENST00000354828 NPSP0C0P6 89 aa6.98□□□□□ -1.29
GABPA-201ENST00000354828 MDFIQ99750 246 aa6.98□□□□□ -1.29
GABPA-201ENST00000354828 H3BQ85 93 aa6.97□□□□□ -1.29
GABPA-201ENST00000354828 FSHBP01225 129 aa6.97□□□□□ -1.29
GABPA-201ENST00000354828 H3BMG7 143 aa6.97□□□□□ -1.29
GABPA-201ENST00000354828 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
GABPA-201ENST00000354828 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
GABPA-201ENST00000354828 NREPQ16612 68 aa6.97□□□□□ -1.29
GABPA-201ENST00000354828 A0A0J9YXY3 114 aa6.96□□□□□ -1.29
GABPA-201ENST00000354828 ETDBQ3ZM63 59 aa6.96□□□□□ -1.29
GABPA-201ENST00000354828 PPDPFQ9H3Y8 114 aa6.96□□□□□ -1.29
GABPA-201ENST00000354828 MRPL52Q86TS9 123 aaKnown RBP6.96□□□□□ -1.3
GABPA-201ENST00000354828 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
GABPA-201ENST00000354828 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
GABPA-201ENST00000354828 SZT2Q5T011 3432 aa6.96□□□□□ -1.3
GABPA-201ENST00000354828 H0Y9J4 135 aa6.96□□□□□ -1.3
GABPA-201ENST00000354828 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
GABPA-201ENST00000354828 A0A1W2PPM0 123 aa6.96□□□□□ -1.3
GABPA-201ENST00000354828 DSPP15924 2871 aaKnown RBP6.96□□□□□ -1.3
GABPA-201ENST00000354828 WFDC10BQ8IUB3 73 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 USP17L23D6RBM5 183 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 UBE2V1Q13404 147 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 PPDPFLQ8WWR9 84 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 C21orf62-AS1Q17RA5 79 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 MUC7Q8TAX7 377 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 RPL37AP8A6NKH3 93 aa6.95□□□□□ -1.3
GABPA-201ENST00000354828 POLR2KP53803 58 aaKnown RBP6.95□□□□□ -1.3
GABPA-201ENST00000354828 IGKV2D-26A0A0A0MRZ7 120 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 PLAC8L1A1L4L8 177 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 SPANXDQ9BXN6 97 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 CDC42SE2Q9NRR3 84 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 ZNF706Q9Y5V0 76 aaPredicted RBP6.94□□□□□ -1.3
GABPA-201ENST00000354828 TMEM223A0PJW6 202 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 NRACQ8N912 160 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 CYSRT1A8MQ03 144 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 SPATA3Q8NHX4 192 aa6.94□□□□□ -1.3
GABPA-201ENST00000354828 FLNAP21333 2647 aaKnown RBP6.93□□□□□ -1.3
GABPA-201ENST00000354828 A8MZ25 164 aa6.93□□□□□ -1.3
GABPA-201ENST00000354828 SPANXB1Q9NS25 103 aaPredicted RBP6.93□□□□□ -1.3
GABPA-201ENST00000354828 ITPR3Q14573 2671 aa6.93□□□□□ -1.3
GABPA-201ENST00000354828 MAST4O15021 2626 aa6.93□□□□□ -1.3
GABPA-201ENST00000354828 MRPS36P82909 103 aaKnown RBP6.93□□□□□ -1.3
GABPA-201ENST00000354828 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
GABPA-201ENST00000354828 F8W1H4 67 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 POM121L12Q8N7R1 296 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 CLEC2BQ92478 149 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 K7EP34 96 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 ATRQ13535 2644 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 FXYD2P54710 66 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 C6orf223Q8N319 242 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 M0R378 163 aa6.92□□□□□ -1.3
GABPA-201ENST00000354828 TMEM256-PLSCR3K7ERE1 68 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 DLEU1O43261 78 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 GAS8-AS1O95177 125 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 IGLV4-60A0A075B6I1 120 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 JMJD7-PLA2G4BH0Y9G9 81 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 M0QXV9 152 aa6.91□□□□□ -1.3
GABPA-201ENST00000354828 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
GABPA-201ENST00000354828 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.3
GABPA-201ENST00000354828 LINC00308Q8TCZ7 52 aa6.9□□□□□ -1.3
GABPA-201ENST00000354828 AKAP13Q12802 2813 aa6.9□□□□□ -1.31
GABPA-201ENST00000354828 AGRNO00468 2067 aa6.9□□□□□ -1.31
GABPA-201ENST00000354828 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 WFDC9Q8NEX5 89 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 COX6A2Q02221 97 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 LINC01620Q4KN68 170 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 SPATA12Q7Z6I5 190 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 RPL28P46779 137 aaKnown RBP6.89□□□□□ -1.31
GABPA-201ENST00000354828 SPINK6Q6UWN8 80 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 Q8IZM0 81 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 HRCT1Q6UXD1 115 aa6.89□□□□□ -1.31
GABPA-201ENST00000354828 IGLV9-49A0A0B4J1Y8 123 aa6.88□□□□□ -1.31
GABPA-201ENST00000354828 CNFNQ9BYD5 112 aa6.88□□□□□ -1.31
GABPA-201ENST00000354828 COL6A3P12111 3177 aa6.88□□□□□ -1.31
GABPA-201ENST00000354828 TNRC18O15417 2968 aaPredicted RBP6.88□□□□□ -1.31
GABPA-201ENST00000354828 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
GABPA-201ENST00000354828 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
GABPA-201ENST00000354828 Q6ZSN1 163 aa6.88□□□□□ -1.31
GABPA-201ENST00000354828 A0A096LNT2 108 aa6.87□□□□□ -1.31
GABPA-201ENST00000354828 TRBV10-2A0A0K0K1G8 114 aa6.87□□□□□ -1.31
GABPA-201ENST00000354828 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
GABPA-201ENST00000354828 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
GABPA-201ENST00000354828 ESRGQ1W209 222 aa6.86□□□□□ -1.31
GABPA-201ENST00000354828 C1orf137Q5JT78 98 aa6.86□□□□□ -1.31
GABPA-201ENST00000354828 LINC00242Q5T6M2 205 aa6.86□□□□□ -1.31
GABPA-201ENST00000354828 IGSF10Q6WRI0 2623 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms