RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 NHLRC4P0CG21 123 aaPredicted RBP9.37□□□□□ -0.91
COL6A3-203ENST00000353578 KLLNB2CW77 178 aa9.36□□□□□ -0.91
COL6A3-203ENST00000353578 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
COL6A3-203ENST00000353578 LINC01547P58512 204 aaPredicted RBP9.36□□□□□ -0.91
COL6A3-203ENST00000353578 APRG1Q8IVJ8 170 aa9.36□□□□□ -0.91
COL6A3-203ENST00000353578 ANKRD17O75179 2603 aaKnown RBP9.36□□□□□ -0.91
COL6A3-203ENST00000353578 SPAG11AQ6PDA7 123 aa9.36□□□□□ -0.91
COL6A3-203ENST00000353578 SLPIP03973 132 aa9.36□□□□□ -0.91
COL6A3-203ENST00000353578 CTSZQ9UBR2 303 aa9.35□□□□□ -0.91
COL6A3-203ENST00000353578 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
COL6A3-203ENST00000353578 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
COL6A3-203ENST00000353578 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
COL6A3-203ENST00000353578 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
COL6A3-203ENST00000353578 CRIP1P50238 77 aa9.34□□□□□ -0.91
COL6A3-203ENST00000353578 IGLV4-69A0A075B6H9 119 aa9.33□□□□□ -0.92
COL6A3-203ENST00000353578 Q6ZS46 218 aa9.33□□□□□ -0.92
COL6A3-203ENST00000353578 KLK12Q9UKR0 248 aa9.33□□□□□ -0.92
COL6A3-203ENST00000353578 IGF1P05019 195 aa9.33□□□□□ -0.92
COL6A3-203ENST00000353578 CRYGDP07320 174 aa9.33□□□□□ -0.92
COL6A3-203ENST00000353578 PSMG3-AS1Q96PY0 264 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 C4orf26Q17RF5 130 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 COL4A3Q01955 1670 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 C22orf34Q6ZV56 151 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 AMELXQ99217 191 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 USP9YO00507 2555 aaPredicted RBP9.32□□□□□ -0.92
COL6A3-203ENST00000353578 DEFB121Q5J5C9 76 aa9.32□□□□□ -0.92
COL6A3-203ENST00000353578 CHCHD7Q9BUK0 85 aa9.31□□□□□ -0.92
COL6A3-203ENST00000353578 C10orf25Q5T742 122 aa9.31□□□□□ -0.92
COL6A3-203ENST00000353578 IGHV4-59P01825 116 aa9.31□□□□□ -0.92
COL6A3-203ENST00000353578 K7EQG2 157 aa9.31□□□□□ -0.92
COL6A3-203ENST00000353578 WFDC13Q8IUB5 93 aa9.3□□□□□ -0.92
COL6A3-203ENST00000353578 PIEZO1Q92508 2521 aa9.3□□□□□ -0.92
COL6A3-203ENST00000353578 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
COL6A3-203ENST00000353578 IGF2-ASQ6U949 168 aa9.3□□□□□ -0.92
COL6A3-203ENST00000353578 H0Y9P7 68 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 A0A096LPF7 62 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 SPRNQ5BIV9 151 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-203ENST00000353578 RITA1Q96K30 269 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 FAM215AQ9Y5M1 114 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
COL6A3-203ENST00000353578 MUC22E2RYF6 1773 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-203ENST00000353578 A0A087WVE0 104 aa9.28□□□□□ -0.92
COL6A3-203ENST00000353578 E7EUB6 86 aa9.28□□□□□ -0.92
COL6A3-203ENST00000353578 KTN1-AS1Q86SY8 53 aa9.28□□□□□ -0.92
COL6A3-203ENST00000353578 BRWD1-AS2P59051 145 aa9.28□□□□□ -0.92
COL6A3-203ENST00000353578 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
COL6A3-203ENST00000353578 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.92
COL6A3-203ENST00000353578 Q6ZVQ6 151 aa9.27□□□□□ -0.93
COL6A3-203ENST00000353578 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
COL6A3-203ENST00000353578 COL4A4P53420 1690 aaPredicted RBP9.27□□□□□ -0.93
COL6A3-203ENST00000353578 LINC00846Q9NV44 126 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 OXLD1Q5BKU9 147 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 IL17DQ8TAD2 202 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 SPTBN4Q9H254 2564 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 C7orf65Q6ZTY9 151 aa9.26□□□□□ -0.93
COL6A3-203ENST00000353578 SLURP1P55000 103 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 PRR4Q16378 134 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 URB1-AS1Q96HZ7 61 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 COL4A6Q14031 1691 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 IGFL2Q6UWQ7 119 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 SMIM1B2RUZ4 78 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 KLKP1Q107X0 134 aa9.25□□□□□ -0.93
COL6A3-203ENST00000353578 PRR15Q8IV56 129 aa9.24□□□□□ -0.93
COL6A3-203ENST00000353578 ZFHX2Q9C0A1 2572 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-203ENST00000353578 DCANP1Q8TF63 244 aa9.24□□□□□ -0.93
COL6A3-203ENST00000353578 CRIP2P52943 208 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-203ENST00000353578 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
COL6A3-203ENST00000353578 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
COL6A3-203ENST00000353578 ANKRD11Q6UB99 2663 aaPredicted RBP9.23□□□□□ -0.93
COL6A3-203ENST00000353578 A0A087WYN8 130 aa9.22□□□□□ -0.93
COL6A3-203ENST00000353578 DEFB114Q30KQ6 69 aa9.22□□□□□ -0.93
COL6A3-203ENST00000353578 ELOF1P60002 83 aaKnown RBP9.22□□□□□ -0.93
COL6A3-203ENST00000353578 ACYP2P14621 99 aa9.22□□□□□ -0.93
COL6A3-203ENST00000353578 UNQ9165/PRO28630Q6UXU0 137 aa9.22□□□□□ -0.93
COL6A3-203ENST00000353578 JMJD1CQ15652 2540 aa9.22□□□□□ -0.93
COL6A3-203ENST00000353578 LINC01548A6NM66 108 aa9.22□□□□□ -0.93
COL6A3-203ENST00000353578 LY6HO94772 140 aa9.21□□□□□ -0.93
COL6A3-203ENST00000353578 MTORP42345 2549 aa9.21□□□□□ -0.93
COL6A3-203ENST00000353578 IGLV2-18A0A075B6J9 118 aa9.21□□□□□ -0.93
COL6A3-203ENST00000353578 LINC00242Q5T6M2 205 aa9.21□□□□□ -0.94
COL6A3-203ENST00000353578 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.94
COL6A3-203ENST00000353578 LINC00575Q6W349 94 aa9.21□□□□□ -0.94
COL6A3-203ENST00000353578 LELP1Q5T871 98 aa9.21□□□□□ -0.94
COL6A3-203ENST00000353578 Q8N7P7 452 aa9.2□□□□□ -0.94
COL6A3-203ENST00000353578 CRIP3Q6Q6R5 217 aa9.2□□□□□ -0.94
COL6A3-203ENST00000353578 Q6ZPA2 131 aa9.2□□□□□ -0.94
COL6A3-203ENST00000353578 COL27A1Q8IZC6 1860 aaPredicted RBP9.2□□□□□ -0.94
COL6A3-203ENST00000353578 A0A1B0GU69 56 aa9.2□□□□□ -0.94
COL6A3-203ENST00000353578 FBXL19-AS1Q494R0 122 aa9.2□□□□□ -0.94
COL6A3-203ENST00000353578 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
COL6A3-203ENST00000353578 A0A096LNJ9 63 aa9.19□□□□□ -0.94
COL6A3-203ENST00000353578 Q6ZTI0 123 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms