RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 RNF151Q2KHN1 245 aa12.63□□□□□ -0.39
CEACAM3-201ENST00000344550 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
CEACAM3-201ENST00000344550 NPSP0C0P6 89 aa12.62□□□□□ -0.39
CEACAM3-201ENST00000344550 LINC00526Q96FQ7 95 aa12.62□□□□□ -0.39
CEACAM3-201ENST00000344550 CTDSP1Q9GZU7 261 aa12.62□□□□□ -0.39
CEACAM3-201ENST00000344550 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
CEACAM3-201ENST00000344550 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
CEACAM3-201ENST00000344550 Q8N8P6 123 aa12.61□□□□□ -0.39
CEACAM3-201ENST00000344550 CAMK2N2Q96S95 79 aa12.61□□□□□ -0.39
CEACAM3-201ENST00000344550 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
CEACAM3-201ENST00000344550 G0S2P27469 103 aa12.6□□□□□ -0.39
CEACAM3-201ENST00000344550 SERTAD4-AS1Q5TG53 156 aa12.6□□□□□ -0.39
CEACAM3-201ENST00000344550 TMEM218A2RU14 115 aa12.59□□□□□ -0.39
CEACAM3-201ENST00000344550 HNRNPA3P51991 378 aaKnown RBP12.59□□□□□ -0.39
CEACAM3-201ENST00000344550 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
CEACAM3-201ENST00000344550 ORMDL2Q53FV1 153 aa12.59□□□□□ -0.39
CEACAM3-201ENST00000344550 TMEM141Q96I45 108 aa12.59□□□□□ -0.39
CEACAM3-201ENST00000344550 SPAG11BQ08648 103 aa12.58□□□□□ -0.4
CEACAM3-201ENST00000344550 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
CEACAM3-201ENST00000344550 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
CEACAM3-201ENST00000344550 TGIF2-C20orf24A0A0A6YYL0 155 aa12.57□□□□□ -0.4
CEACAM3-201ENST00000344550 OPRPNQ99935 248 aaPredicted RBP12.57□□□□□ -0.4
CEACAM3-201ENST00000344550 SEC11CQ9BY50 192 aa12.57□□□□□ -0.4
CEACAM3-201ENST00000344550 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
CEACAM3-201ENST00000344550 LRP1Q07954 4544 aaKnown RBP12.57□□□□□ -0.4
CEACAM3-201ENST00000344550 IGLV4-3A0A075B6K6 122 aa12.56□□□□□ -0.4
CEACAM3-201ENST00000344550 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
CEACAM3-201ENST00000344550 A0A087WZ39 114 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 LOC389332A0A1B0GUA5 103 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 IFITM2Q01629 132 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 Q6ZN92 141 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 TEX43Q6ZNM6 134 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 ORAOV1Q8WV07 137 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 C2orf88Q9BSF0 95 aa12.55□□□□□ -0.4
CEACAM3-201ENST00000344550 PRR3P79522 188 aaKnown RBP12.54□□□□□ -0.4
CEACAM3-201ENST00000344550 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
CEACAM3-201ENST00000344550 C2orf66Q6UXQ4 117 aa12.54□□□□□ -0.4
CEACAM3-201ENST00000344550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.53□□□□□ -0.4
CEACAM3-201ENST00000344550 NDUFA1O15239 70 aa12.53□□□□□ -0.4
CEACAM3-201ENST00000344550 ADCYAP1P18509 176 aa12.53□□□□□ -0.4
CEACAM3-201ENST00000344550 GAGE2BQ13066 116 aa12.53□□□□□ -0.4
CEACAM3-201ENST00000344550 LINC00242Q5T6M2 205 aa12.53□□□□□ -0.4
CEACAM3-201ENST00000344550 PKHD1L1Q86WI1 4243 aa12.52□□□□□ -0.41
CEACAM3-201ENST00000344550 LINC01549A6NIU2 74 aa12.52□□□□□ -0.41
CEACAM3-201ENST00000344550 COX19Q49B96 90 aa12.52□□□□□ -0.41
CEACAM3-201ENST00000344550 AMELXQ99217 191 aa12.52□□□□□ -0.41
CEACAM3-201ENST00000344550 VCX2Q9H322 139 aa12.52□□□□□ -0.41
CEACAM3-201ENST00000344550 FAT3Q8TDW7 4589 aa12.51□□□□□ -0.41
CEACAM3-201ENST00000344550 TLX1NBP0CAT3 122 aa12.51□□□□□ -0.41
CEACAM3-201ENST00000344550 S100PP25815 95 aa12.51□□□□□ -0.41
CEACAM3-201ENST00000344550 UBE2D1P51668 147 aa12.51□□□□□ -0.41
CEACAM3-201ENST00000344550 Q6ZRP5 223 aa12.51□□□□□ -0.41
CEACAM3-201ENST00000344550 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
CEACAM3-201ENST00000344550 SEC11AP67812 179 aa12.5□□□□□ -0.41
CEACAM3-201ENST00000344550 FAM19A3Q7Z5A8 133 aa12.5□□□□□ -0.41
CEACAM3-201ENST00000344550 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
CEACAM3-201ENST00000344550 SPINK6Q6UWN8 80 aa12.48□□□□□ -0.41
CEACAM3-201ENST00000344550 TIMM17AQ99595 171 aa12.48□□□□□ -0.41
CEACAM3-201ENST00000344550 TRBV30A0A0K0K1B3 111 aa12.47□□□□□ -0.41
CEACAM3-201ENST00000344550 RPL18AQ02543 176 aaKnown RBP12.47□□□□□ -0.41
CEACAM3-201ENST00000344550 KIAA0087Q14695 138 aa12.47□□□□□ -0.41
CEACAM3-201ENST00000344550 C10orf91Q5T1B1 145 aa12.47□□□□□ -0.41
CEACAM3-201ENST00000344550 C9orf116Q5BN46 136 aaPredicted RBP12.46□□□□□ -0.41
CEACAM3-201ENST00000344550 LINC00173Q6ZV60 143 aa12.46□□□□□ -0.41
CEACAM3-201ENST00000344550 TOMM6Q96B49 74 aa12.46□□□□□ -0.41
CEACAM3-201ENST00000344550 A0A1W2PNN7 141 aa12.45□□□□□ -0.42
CEACAM3-201ENST00000344550 MT-ND6P03923 174 aa12.45□□□□□ -0.42
CEACAM3-201ENST00000344550 MT1HL1P0DM35 61 aa12.45□□□□□ -0.42
CEACAM3-201ENST00000344550 RHEBQ15382 184 aa12.45□□□□□ -0.42
CEACAM3-201ENST00000344550 LINC01546A6NGU7 62 aa12.44□□□□□ -0.42
CEACAM3-201ENST00000344550 HERVK_113P63121 156 aa12.44□□□□□ -0.42
CEACAM3-201ENST00000344550 UNQ6190/PRO20217Q6UXQ8 127 aa12.44□□□□□ -0.42
CEACAM3-201ENST00000344550 ERASQ7Z444 233 aa12.44□□□□□ -0.42
CEACAM3-201ENST00000344550 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
CEACAM3-201ENST00000344550 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
CEACAM3-201ENST00000344550 A0A0J9YXV3 536 aa12.43□□□□□ -0.42
CEACAM3-201ENST00000344550 SRSF9Q13242 221 aaKnown RBP eCLIP12.43□□□□□ -0.42
CEACAM3-201ENST00000344550 LINC01600Q96MT4 127 aa12.43□□□□□ -0.42
CEACAM3-201ENST00000344550 C6orf48Q9UBA6 75 aa12.43□□□□□ -0.42
CEACAM3-201ENST00000344550 KIAA1644Q3SXP7 199 aa12.42□□□□□ -0.42
CEACAM3-201ENST00000344550 C10orf25Q5T742 122 aa12.42□□□□□ -0.42
CEACAM3-201ENST00000344550 REG3GQ6UW15 175 aa12.42□□□□□ -0.42
CEACAM3-201ENST00000344550 PACRGQ96M98 296 aaPredicted RBP12.41□□□□□ -0.42
CEACAM3-201ENST00000344550 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
CEACAM3-201ENST00000344550 NDUFC2-KCTD14E9PQ53 114 aa12.4□□□□□ -0.42
CEACAM3-201ENST00000344550 PRSS2P07478 247 aa12.4□□□□□ -0.42
CEACAM3-201ENST00000344550 Q8IZM0 81 aa12.4□□□□□ -0.42
CEACAM3-201ENST00000344550 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
CEACAM3-201ENST00000344550 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
CEACAM3-201ENST00000344550 ODF1Q14990 250 aa12.38□□□□□ -0.43
CEACAM3-201ENST00000344550 CKS1BP61024 79 aa12.37□□□□□ -0.43
CEACAM3-201ENST00000344550 C6orf226Q5I0X4 101 aa12.37□□□□□ -0.43
CEACAM3-201ENST00000344550 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
CEACAM3-201ENST00000344550 RPS10P5Q9NQ39 176 aa12.36□□□□□ -0.43
CEACAM3-201ENST00000344550 PSORS1C2Q9UIG4 136 aa12.36□□□□□ -0.43
CEACAM3-201ENST00000344550 PLA2G2DQ9UNK4 145 aa12.36□□□□□ -0.43
CEACAM3-201ENST00000344550 CXCL5P42830 114 aa12.35□□□□□ -0.43
CEACAM3-201ENST00000344550 C2orf82Q6UX34 121 aa12.35□□□□□ -0.43
CEACAM3-201ENST00000344550 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
CEACAM3-201ENST00000344550 CDKN2A-AS1Q9UH64 79 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms