RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TCAPO15273 167 aa10.38□□□□□ -0.75
ATG4B-201ENST00000344376 XCL1P47992 114 aa10.37□□□□□ -0.75
ATG4B-201ENST00000344376 SS18Q15532 418 aa10.37□□□□□ -0.75
ATG4B-201ENST00000344376 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
ATG4B-201ENST00000344376 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 D6R8Y8 96 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 SERF1AO75920 110 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 TNFRSF6BO95407 300 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 PPBPP02775 128 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 LINC00310P59036 64 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
ATG4B-201ENST00000344376 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
ATG4B-201ENST00000344376 ALKBH7Q9BT30 221 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-201ENST00000344376 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
ATG4B-201ENST00000344376 CCL25O15444 150 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 FOXI1Q12951 378 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 HIGD2BQ4VC39 106 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
ATG4B-201ENST00000344376 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
ATG4B-201ENST00000344376 A0A1B0GV90 55 aa10.34□□□□□ -0.75
ATG4B-201ENST00000344376 UBE2D4Q9Y2X8 147 aa10.34□□□□□ -0.75
ATG4B-201ENST00000344376 GVQW2A0A096LPI5 108 aaPredicted RBP10.33□□□□□ -0.76
ATG4B-201ENST00000344376 NUPR1O60356 82 aa10.33□□□□□ -0.76
ATG4B-201ENST00000344376 ORMDL3Q8N138 153 aa10.33□□□□□ -0.76
ATG4B-201ENST00000344376 IGHV1-58A0A0C4DH39 117 aa10.32□□□□□ -0.76
ATG4B-201ENST00000344376 NPYP01303 97 aa10.32□□□□□ -0.76
ATG4B-201ENST00000344376 SLPIP03973 132 aa10.32□□□□□ -0.76
ATG4B-201ENST00000344376 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
ATG4B-201ENST00000344376 TIMM21Q9BVV7 248 aa10.32□□□□□ -0.76
ATG4B-201ENST00000344376 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.32□□□□□ -0.76
ATG4B-201ENST00000344376 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
ATG4B-201ENST00000344376 TEX43Q6ZNM6 134 aa10.31□□□□□ -0.76
ATG4B-201ENST00000344376 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
ATG4B-201ENST00000344376 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
ATG4B-201ENST00000344376 TRAV13-1A0A0B4J241 112 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 HSBP1O75506 76 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 SCGB1D1O95968 90 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 MALP21145 153 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 RNASE13Q5GAN3 156 aaKnown RBP10.29□□□□□ -0.76
ATG4B-201ENST00000344376 Q6ZUT4 128 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 SPANXA1Q9NS26 97 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 LAMTOR2Q9Y2Q5 125 aa10.29□□□□□ -0.76
ATG4B-201ENST00000344376 PANO1I0J062 215 aa10.28□□□□□ -0.76
ATG4B-201ENST00000344376 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
ATG4B-201ENST00000344376 ZNF561-AS1K7EIQ3 104 aa10.27□□□□□ -0.76
ATG4B-201ENST00000344376 COX7A2LO14548 114 aa10.27□□□□□ -0.76
ATG4B-201ENST00000344376 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.76
ATG4B-201ENST00000344376 RPL39P62891 51 aaKnown RBP10.27□□□□□ -0.76
ATG4B-201ENST00000344376 COX6A2Q02221 97 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 M0R143 59 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 CHTF8P0CG12 524 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 SNHG12Q9BXW3 62 aa10.26□□□□□ -0.77
ATG4B-201ENST00000344376 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-201ENST00000344376 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
ATG4B-201ENST00000344376 DMBT1Q9UGM3 2413 aaPredicted RBP10.24□□□□□ -0.77
ATG4B-201ENST00000344376 LINC00614P0C842 121 aa10.24□□□□□ -0.77
ATG4B-201ENST00000344376 IFI27P40305 119 aaPredicted RBP10.24□□□□□ -0.77
ATG4B-201ENST00000344376 MRPS36P82909 103 aaKnown RBP10.24□□□□□ -0.77
ATG4B-201ENST00000344376 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
ATG4B-201ENST00000344376 A0A087WYN8 130 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 IGKV2-24A0A0C4DH68 120 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 LOC389332A0A1B0GUA5 103 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 APOMO95445 188 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 KRTAP10-4P60372 401 aaPredicted RBP10.23□□□□□ -0.77
ATG4B-201ENST00000344376 SYCNQ0VAF6 134 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 PRSS3P2Q8NHM4 247 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 LINC00526Q96FQ7 95 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
ATG4B-201ENST00000344376 PRSS47A8MTI9 375 aa10.22□□□□□ -0.77
ATG4B-201ENST00000344376 J3QL48 77 aa10.22□□□□□ -0.77
ATG4B-201ENST00000344376 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
ATG4B-201ENST00000344376 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
ATG4B-201ENST00000344376 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
ATG4B-201ENST00000344376 Q8N8P6 123 aa10.22□□□□□ -0.77
ATG4B-201ENST00000344376 FAM19A2Q8N3H0 131 aa10.21□□□□□ -0.78
ATG4B-201ENST00000344376 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.78
ATG4B-201ENST00000344376 PLAC8Q9NZF1 115 aa10.21□□□□□ -0.78
ATG4B-201ENST00000344376 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.78
ATG4B-201ENST00000344376 IGLV4-69A0A075B6H9 119 aa10.2□□□□□ -0.78
ATG4B-201ENST00000344376 FA2HQ7L5A8 372 aa10.2□□□□□ -0.78
ATG4B-201ENST00000344376 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
ATG4B-201ENST00000344376 KRTDAPP60985 99 aa10.19□□□□□ -0.78
ATG4B-201ENST00000344376 ORMDL2Q53FV1 153 aa10.19□□□□□ -0.78
ATG4B-201ENST00000344376 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
ATG4B-201ENST00000344376 CAMK2N2Q96S95 79 aa10.19□□□□□ -0.78
ATG4B-201ENST00000344376 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
ATG4B-201ENST00000344376 A0A096LNI7 61 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 K7EMI3 77 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
ATG4B-201ENST00000344376 STPG4Q8N801 248 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms