RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 MRGPRG-AS1Q2M3A8 158 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 TIMM21Q9BVV7 248 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 PLA2G1BP04054 148 aaKnown RBP5.26□□□□□ -1.57
ZNF540-202ENST00000343599 RHOHQ15669 191 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 APRG1Q8IVJ8 170 aa5.26□□□□□ -1.57
ZNF540-202ENST00000343599 ACANP16112 2415 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 IGHV3OR16-10A0A075B7F0 116 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 C11orf86A6NJI1 115 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 COX6CP09669 75 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 SAA2P0DJI9 122 aaPredicted RBP5.25□□□□□ -1.57
ZNF540-202ENST00000343599 COX7A1P24310 79 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 SYNJ2BPP57105 145 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 MUSTN1Q8IVN3 82 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 HOXA4Q00056 320 aaPredicted RBP5.25□□□□□ -1.57
ZNF540-202ENST00000343599 CCDC168Q8NDH2 2452 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 A0A0J9YX75 114 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 ATP6V0E1O15342 81 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 TFF1P04155 84 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 PLGLAQ15195 96 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
ZNF540-202ENST00000343599 SMIM2Q9BVW6 85 aa5.25□□□□□ -1.57
ZNF540-202ENST00000343599 SAA1P0DJI8 122 aaPredicted RBP5.24□□□□□ -1.57
ZNF540-202ENST00000343599 WT1-ASQ06250 92 aa5.24□□□□□ -1.57
ZNF540-202ENST00000343599 FRAS1Q86XX4 4008 aa5.24□□□□□ -1.57
ZNF540-202ENST00000343599 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
ZNF540-202ENST00000343599 IGLV11-55A0A075B6I3 123 aa5.24□□□□□ -1.57
ZNF540-202ENST00000343599 IGHV4OR15-8A0A075B7B6 117 aa5.24□□□□□ -1.57
ZNF540-202ENST00000343599 A0A087WW49 117 aa5.24□□□□□ -1.57
ZNF540-202ENST00000343599 MRPS36P82909 103 aaKnown RBP5.24□□□□□ -1.57
ZNF540-202ENST00000343599 CNTRLQ7Z7A1 2325 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 MTORP42345 2549 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 PKD1L1Q8TDX9 2849 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 RBMY1BA6NDE4 496 aaKnown RBP5.23□□□□□ -1.57
ZNF540-202ENST00000343599 RBMY1EA6NEQ0 496 aaKnown RBP5.23□□□□□ -1.57
ZNF540-202ENST00000343599 RBMY1DP0C7P1 496 aaKnown RBP5.23□□□□□ -1.57
ZNF540-202ENST00000343599 Q6JHZ5 121 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 CD164L2Q6UWJ8 174 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 C1orf158Q8N1D5 194 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 CLEC2BQ92478 149 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 DNAH11Q96DT5 4516 aa5.23□□□□□ -1.57
ZNF540-202ENST00000343599 SDHAF1A6NFY7 115 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 E7EUB6 86 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 IGHV3-48P01763 117 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 IGKV1-16P04430 117 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 SUMO2P61956 95 aaKnown RBP5.22□□□□□ -1.57
ZNF540-202ENST00000343599 C17orf77Q96MU5 243 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 ZNF80P51504 273 aaPredicted RBP5.22□□□□□ -1.57
ZNF540-202ENST00000343599 IGHV4-4A0A075B6R2 117 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
ZNF540-202ENST00000343599 PDE6HQ13956 83 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 C2orf66Q6UXQ4 117 aa5.22□□□□□ -1.57
ZNF540-202ENST00000343599 SONP18583 2426 aaKnown RBP5.21□□□□□ -1.57
ZNF540-202ENST00000343599 A0A0U1RQV1 116 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 I3L3M4 83 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 LEPROTO15243 131 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 TRGV3P03979 118 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 TMEM243Q9BU79 118 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 Q8N1X5 172 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
ZNF540-202ENST00000343599 TRAV26-2A0A0B4J265 109 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 H3BRN7 92 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 M0R3E3 92 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 TSHBP01222 138 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 LINC00612Q8N6U2 182 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 TRAV8-3A0A0A6YYJ7 113 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 INAFM2P0DMQ5 153 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 FAM222AQ5U5X8 452 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 LITAFQ99732 161 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 KLK15Q9H2R5 256 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 CUBNO60494 3623 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 KNCNA6PVL3 124 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 SLC50A1Q9BRV3 221 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 C22orf24Q9Y442 160 aa5.2□□□□□ -1.58
ZNF540-202ENST00000343599 IGIPA6NJ69 53 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 PRSS2P07478 247 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 LYZP61626 148 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 RNF182Q8N6D2 247 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 COPS9Q8WXC6 57 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 LEAP2Q969E1 77 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 MAP6D1Q9H9H5 199 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 TNCP24821 2201 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 DAZ2Q13117 558 aaKnown RBP5.19□□□□□ -1.58
ZNF540-202ENST00000343599 DAZ4Q86SG3 579 aaKnown RBP5.19□□□□□ -1.58
ZNF540-202ENST00000343599 TMEM141Q96I45 108 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 DAZ1Q9NQZ3 744 aaKnown RBP5.19□□□□□ -1.58
ZNF540-202ENST00000343599 DAZ3Q9NR90 486 aaKnown RBP5.19□□□□□ -1.58
ZNF540-202ENST00000343599 FAM30AQ9NZY2 134 aa5.19□□□□□ -1.58
ZNF540-202ENST00000343599 IGHV3-64DA0A0J9YX35 117 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 H7BZZ5 65 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 DLX1P56177 255 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 CD164Q04900 197 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 ZNF876PQ49A33 203 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 KRTAP17-1Q9BYP8 105 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 UBE2D4Q9Y2X8 147 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 A0A0J9YXY3 114 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 LYPD5Q6UWN5 251 aa5.18□□□□□ -1.58
ZNF540-202ENST00000343599 LYRM9A8MSI8 78 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms