RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 C22orf24Q9Y442 160 aa10.17□□□□□ -0.78
MUC1-204ENST00000343256 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
MUC1-204ENST00000343256 C2orf82Q6UX34 121 aa10.16□□□□□ -0.78
MUC1-204ENST00000343256 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
MUC1-204ENST00000343256 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
MUC1-204ENST00000343256 SMKR1H3BMG3 65 aa10.14□□□□□ -0.79
MUC1-204ENST00000343256 K7EN84 100 aa10.14□□□□□ -0.79
MUC1-204ENST00000343256 SMAGPQ0VAQ4 97 aa10.14□□□□□ -0.79
MUC1-204ENST00000343256 VCYO14598 125 aa10.13□□□□□ -0.79
MUC1-204ENST00000343256 BCE1O60756 84 aa10.13□□□□□ -0.79
MUC1-204ENST00000343256 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
MUC1-204ENST00000343256 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
MUC1-204ENST00000343256 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
MUC1-204ENST00000343256 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
MUC1-204ENST00000343256 RAB4AP20338 218 aa10.11□□□□□ -0.79
MUC1-204ENST00000343256 AMN1Q8IY45 258 aa10.11□□□□□ -0.79
MUC1-204ENST00000343256 OCC1Q8TAD7 63 aa10.11□□□□□ -0.79
MUC1-204ENST00000343256 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
MUC1-204ENST00000343256 SMLR1H3BR10 107 aa10.1□□□□□ -0.79
MUC1-204ENST00000343256 PDE6DO43924 150 aa10.1□□□□□ -0.79
MUC1-204ENST00000343256 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
MUC1-204ENST00000343256 LBHQ53QV2 105 aaPredicted RBP10.1□□□□□ -0.79
MUC1-204ENST00000343256 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
MUC1-204ENST00000343256 LINC00337Q8N6G1 96 aa10.09□□□□□ -0.79
MUC1-204ENST00000343256 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
MUC1-204ENST00000343256 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
MUC1-204ENST00000343256 GATCO43716 136 aaKnown RBP10.08□□□□□ -0.8
MUC1-204ENST00000343256 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
MUC1-204ENST00000343256 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
MUC1-204ENST00000343256 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
MUC1-204ENST00000343256 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
MUC1-204ENST00000343256 FAM229BQ4G0N7 80 aa10.07□□□□□ -0.8
MUC1-204ENST00000343256 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
MUC1-204ENST00000343256 NRACQ8N912 160 aa10.07□□□□□ -0.8
MUC1-204ENST00000343256 IGKV2D-26A0A0A0MRZ7 120 aa10.06□□□□□ -0.8
MUC1-204ENST00000343256 TGIF2-C20orf24A0A0A6YYL0 155 aa10.06□□□□□ -0.8
MUC1-204ENST00000343256 ZNF727A8MUV8 499 aa10.06□□□□□ -0.8
MUC1-204ENST00000343256 MRPL55Q7Z7F7 128 aaKnown RBP10.06□□□□□ -0.8
MUC1-204ENST00000343256 BORCS7Q96B45 105 aa10.06□□□□□ -0.8
MUC1-204ENST00000343256 RPL37AP8A6NKH3 93 aa10.05□□□□□ -0.8
MUC1-204ENST00000343256 HBBP68871 147 aa10.05□□□□□ -0.8
MUC1-204ENST00000343256 KRTAP13-3Q3SY46 172 aa10.05□□□□□ -0.8
MUC1-204ENST00000343256 A8MWL6 223 aa10.04□□□□□ -0.8
MUC1-204ENST00000343256 KRTAP9-7A8MTY7 169 aa10.03□□□□□ -0.8
MUC1-204ENST00000343256 ZNF345Q14585 488 aa10.03□□□□□ -0.8
MUC1-204ENST00000343256 A0A1B0GUT8 65 aa10.02□□□□□ -0.81
MUC1-204ENST00000343256 UBE2AP49459 152 aa10.02□□□□□ -0.81
MUC1-204ENST00000343256 SEC61BP60468 96 aaKnown RBP10.02□□□□□ -0.81
MUC1-204ENST00000343256 KRTAP13-1Q8IUC0 172 aa10.02□□□□□ -0.81
MUC1-204ENST00000343256 LINC00167Q96N53 147 aa10.02□□□□□ -0.81
MUC1-204ENST00000343256 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
MUC1-204ENST00000343256 KANTRA0A1W2PQU2 76 aa10.01□□□□□ -0.81
MUC1-204ENST00000343256 GAGE10A6NGK3 116 aa10.01□□□□□ -0.81
MUC1-204ENST00000343256 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
MUC1-204ENST00000343256 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
MUC1-204ENST00000343256 HIGD1CA8MV81 97 aa10□□□□□ -0.81
MUC1-204ENST00000343256 CTAG1AP78358 180 aa10□□□□□ -0.81
MUC1-204ENST00000343256 FP248Q71RG6 208 aaPredicted RBP10□□□□□ -0.81
MUC1-204ENST00000343256 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
MUC1-204ENST00000343256 TEX46H3BTG2 121 aa9.99□□□□□ -0.81
MUC1-204ENST00000343256 PPP1R17O96001 155 aa9.99□□□□□ -0.81
MUC1-204ENST00000343256 MT1HP80294 61 aa9.99□□□□□ -0.81
MUC1-204ENST00000343256 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
MUC1-204ENST00000343256 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
MUC1-204ENST00000343256 PPP1R2P9O14990 202 aa9.98□□□□□ -0.81
MUC1-204ENST00000343256 CT83Q5H943 113 aa9.97□□□□□ -0.81
MUC1-204ENST00000343256 PRSS2P07478 247 aa9.96□□□□□ -0.82
MUC1-204ENST00000343256 CKS1BP61024 79 aa9.96□□□□□ -0.82
MUC1-204ENST00000343256 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.82
MUC1-204ENST00000343256 KRTAP19-2Q3LHN2 52 aa9.96□□□□□ -0.82
MUC1-204ENST00000343256 MRPL51Q4U2R6 128 aaKnown RBP9.95□□□□□ -0.82
MUC1-204ENST00000343256 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.94□□□□□ -0.82
MUC1-204ENST00000343256 TCAPO15273 167 aa9.94□□□□□ -0.82
MUC1-204ENST00000343256 PRLHP81277 87 aa9.94□□□□□ -0.82
MUC1-204ENST00000343256 CFC1BP0CG36 223 aa9.93□□□□□ -0.82
MUC1-204ENST00000343256 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
MUC1-204ENST00000343256 PNRC1Q12796 327 aaPredicted RBP9.93□□□□□ -0.82
MUC1-204ENST00000343256 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
MUC1-204ENST00000343256 C20orf78Q9BR46 151 aa9.93□□□□□ -0.82
MUC1-204ENST00000343256 RIGQ13278 110 aa9.92□□□□□ -0.82
MUC1-204ENST00000343256 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
MUC1-204ENST00000343256 HMSDA8MTL9 139 aa9.91□□□□□ -0.82
MUC1-204ENST00000343256 KRTAP10-6P60371 365 aaPredicted RBP9.91□□□□□ -0.82
MUC1-204ENST00000343256 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
MUC1-204ENST00000343256 SPAG11AQ6PDA7 123 aa9.91□□□□□ -0.82
MUC1-204ENST00000343256 LINC01561Q8N1V8 128 aa9.91□□□□□ -0.82
MUC1-204ENST00000343256 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
MUC1-204ENST00000343256 IFI27P40305 119 aaPredicted RBP9.9□□□□□ -0.82
MUC1-204ENST00000343256 FAM104BQ5XKR9 115 aa9.9□□□□□ -0.82
MUC1-204ENST00000343256 TRBV24-1A0A075B6N3 115 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 SCO1O75880 301 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 Q6ZN92 141 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 Q8IZM0 81 aa9.89□□□□□ -0.83
MUC1-204ENST00000343256 ALKBH7Q9BT30 221 aaPredicted RBP9.89□□□□□ -0.83
MUC1-204ENST00000343256 CKS2P33552 79 aa9.88□□□□□ -0.83
MUC1-204ENST00000343256 CEBPGP53567 150 aa9.88□□□□□ -0.83
MUC1-204ENST00000343256 TAGLN2P37802 199 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms