RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 A0A087WVE0 104 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 LECT2O14960 151 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 OXTP01178 125 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 CCL19Q99731 98 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.81□□□□□ -1.32
HOXA1-201ENST00000343060 CCKP06307 115 aa6.81□□□□□ -1.32
HOXA1-201ENST00000343060 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
HOXA1-201ENST00000343060 TRGV1A0A0A0MS02 117 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 NCR3O14931 201 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 ATRXP46100 2492 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 LINC00158P58513 81 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 S100A7L2Q5SY68 101 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 LYPD5Q6UWN5 251 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 ORMDL1Q9P0S3 153 aa6.8□□□□□ -1.32
HOXA1-201ENST00000343060 IGHV3OR16-9A0A0B4J2B5 98 aa6.79□□□□□ -1.32
HOXA1-201ENST00000343060 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
HOXA1-201ENST00000343060 UBE2L6O14933 153 aa6.79□□□□□ -1.32
HOXA1-201ENST00000343060 C18orf65Q6ZTR6 163 aa6.79□□□□□ -1.32
HOXA1-201ENST00000343060 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
HOXA1-201ENST00000343060 A0A087WZ39 114 aa6.78□□□□□ -1.32
HOXA1-201ENST00000343060 DEFB114Q30KQ6 69 aa6.78□□□□□ -1.32
HOXA1-201ENST00000343060 Q6ZTI0 123 aa6.78□□□□□ -1.32
HOXA1-201ENST00000343060 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
HOXA1-201ENST00000343060 XCL2Q9UBD3 114 aa6.78□□□□□ -1.32
HOXA1-201ENST00000343060 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 JMJD7-PLA2G4BH0Y9G9 81 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 NDUFC2O95298 119 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 Q5XG85 94 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 TOMM7Q9P0U1 55 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 VPS13CQ709C8 3753 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 CREBBPQ92793 2442 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 J3QLI3 93 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 FSHBP01225 129 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 DYNLRB2Q8TF09 96 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 C4orf3Q8WVX3 66 aa6.77□□□□□ -1.33
HOXA1-201ENST00000343060 SLPIP03973 132 aa6.76□□□□□ -1.33
HOXA1-201ENST00000343060 FHL2Q14192 279 aa6.76□□□□□ -1.33
HOXA1-201ENST00000343060 CSPG4Q6UVK1 2322 aa6.76□□□□□ -1.33
HOXA1-201ENST00000343060 MUC6Q6W4X9 2439 aa6.76□□□□□ -1.33
HOXA1-201ENST00000343060 Q6YL49 198 aa6.76□□□□□ -1.33
HOXA1-201ENST00000343060 PAX4O43316 350 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 GHRHP01286 108 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 LINC01356Q8N9X3 169 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 A0A096LNT2 108 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 TRAV25A0A0B4J276 109 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 EPM2AB3EWF7 344 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 DSCR9P59020 149 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 HILS1P60008 231 aa6.75□□□□□ -1.33
HOXA1-201ENST00000343060 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
HOXA1-201ENST00000343060 A0A1W2PRX2 142 aa6.74□□□□□ -1.33
HOXA1-201ENST00000343060 BCE1O60756 84 aa6.74□□□□□ -1.33
HOXA1-201ENST00000343060 NANOS2P60321 138 aaKnown RBP6.74□□□□□ -1.33
HOXA1-201ENST00000343060 STHQ8IWL8 128 aa6.74□□□□□ -1.33
HOXA1-201ENST00000343060 IGF2RP11717 2491 aa6.74□□□□□ -1.33
HOXA1-201ENST00000343060 PLAC8L1A1L4L8 177 aa6.74□□□□□ -1.33
HOXA1-201ENST00000343060 COL12A1Q99715 3063 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 PFN2P35080 140 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 Q8N814 137 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 TRBV6-8A0A0A6YYG3 113 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 LOC100131303A0A0U1RQF7 123 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 TMEM256-PLSCR3K7ERE1 68 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
HOXA1-201ENST00000343060 GNLYP22749 145 aa6.72□□□□□ -1.33
HOXA1-201ENST00000343060 NOP10Q9NPE3 64 aaKnown RBP6.72□□□□□ -1.33
HOXA1-201ENST00000343060 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
HOXA1-201ENST00000343060 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
HOXA1-201ENST00000343060 Q8IZM0 81 aa6.71□□□□□ -1.34
HOXA1-201ENST00000343060 C16orf74Q96GX8 76 aa6.71□□□□□ -1.34
HOXA1-201ENST00000343060 LINC00959A0A1B0GUT2 108 aa6.71□□□□□ -1.34
HOXA1-201ENST00000343060 ENHOQ6UWT2 76 aa6.71□□□□□ -1.34
HOXA1-201ENST00000343060 TMEM86BQ8N661 226 aa6.71□□□□□ -1.34
HOXA1-201ENST00000343060 TRAV23DV6A0A075B6W5 121 aa6.7□□□□□ -1.34
HOXA1-201ENST00000343060 IGKV3OR2-268A0A0C4DH90 116 aa6.7□□□□□ -1.34
HOXA1-201ENST00000343060 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
HOXA1-201ENST00000343060 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
HOXA1-201ENST00000343060 CRYBG3Q68DQ2 2970 aa6.7□□□□□ -1.34
HOXA1-201ENST00000343060 XCL1P47992 114 aa6.7□□□□□ -1.34
HOXA1-201ENST00000343060 WFDC9Q8NEX5 89 aa6.7□□□□□ -1.34
HOXA1-201ENST00000343060 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
HOXA1-201ENST00000343060 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
HOXA1-201ENST00000343060 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
HOXA1-201ENST00000343060 TRAV7A0A075B6U4 112 aa6.69□□□□□ -1.34
HOXA1-201ENST00000343060 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
HOXA1-201ENST00000343060 HRCT1Q6UXD1 115 aa6.69□□□□□ -1.34
HOXA1-201ENST00000343060 TRGV2A0A075B6R0 118 aa6.68□□□□□ -1.34
HOXA1-201ENST00000343060 Q6ZQT0 140 aa6.68□□□□□ -1.34
HOXA1-201ENST00000343060 C20orf197Q8N268 126 aa6.68□□□□□ -1.34
HOXA1-201ENST00000343060 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
HOXA1-201ENST00000343060 H7BZZ5 65 aa6.68□□□□□ -1.34
HOXA1-201ENST00000343060 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
HOXA1-201ENST00000343060 KLKP1Q107X0 134 aa6.67□□□□□ -1.34
HOXA1-201ENST00000343060 COX17Q14061 63 aa6.67□□□□□ -1.34
HOXA1-201ENST00000343060 LINC00482Q8N8I6 264 aa6.67□□□□□ -1.34
HOXA1-201ENST00000343060 A0A1B0GUV1 79 aa6.66□□□□□ -1.34
HOXA1-201ENST00000343060 KHDC1LQ5JSQ8 128 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms