RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CCL18P55774 89 aa13.16□□□□□ -0.3
SMPD1-201ENST00000342245 LINC00158P58513 81 aa13.15□□□□□ -0.3
SMPD1-201ENST00000342245 FBXL19-AS1Q494R0 122 aa13.15□□□□□ -0.3
SMPD1-201ENST00000342245 CEP295Q9C0D2 2601 aa13.15□□□□□ -0.3
SMPD1-201ENST00000342245 SLPIP03973 132 aa13.15□□□□□ -0.3
SMPD1-201ENST00000342245 CDC42SE2Q9NRR3 84 aa13.15□□□□□ -0.3
SMPD1-201ENST00000342245 CCL21O00585 134 aa13.14□□□□□ -0.31
SMPD1-201ENST00000342245 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
SMPD1-201ENST00000342245 TRBV7-6A0A0J9YX20 115 aa13.14□□□□□ -0.31
SMPD1-201ENST00000342245 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
SMPD1-201ENST00000342245 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
SMPD1-201ENST00000342245 EDN2P20800 178 aa13.13□□□□□ -0.31
SMPD1-201ENST00000342245 HTN1P15515 57 aa13.13□□□□□ -0.31
SMPD1-201ENST00000342245 BRK1Q8WUW1 75 aa13.13□□□□□ -0.31
SMPD1-201ENST00000342245 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
SMPD1-201ENST00000342245 F8WEM9 126 aa13.12□□□□□ -0.31
SMPD1-201ENST00000342245 RBM3P98179 157 aaKnown RBP13.12□□□□□ -0.31
SMPD1-201ENST00000342245 PAX4O43316 350 aa13.11□□□□□ -0.31
SMPD1-201ENST00000342245 A8MTW9 85 aa13.1□□□□□ -0.31
SMPD1-201ENST00000342245 K7EQD1 137 aa13.1□□□□□ -0.31
SMPD1-201ENST00000342245 CFHR3Q02985 330 aa13.1□□□□□ -0.31
SMPD1-201ENST00000342245 Q8N814 137 aa13.1□□□□□ -0.31
SMPD1-201ENST00000342245 Q96MF0 132 aa13.1□□□□□ -0.31
SMPD1-201ENST00000342245 ADORA2A-AS1P86434 159 aa13.1□□□□□ -0.31
SMPD1-201ENST00000342245 MED13LQ71F56 2210 aa13.09□□□□□ -0.31
SMPD1-201ENST00000342245 TRBV10-1A0A0K0K1A3 114 aa13.08□□□□□ -0.31
SMPD1-201ENST00000342245 ANKHD1Q8IWZ3 2542 aaKnown RBP13.08□□□□□ -0.32
SMPD1-201ENST00000342245 RMI2Q96E14 147 aa13.08□□□□□ -0.32
SMPD1-201ENST00000342245 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
SMPD1-201ENST00000342245 CXCL6P80162 114 aa13.06□□□□□ -0.32
SMPD1-201ENST00000342245 A0A1W2PRX2 142 aa13.06□□□□□ -0.32
SMPD1-201ENST00000342245 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
SMPD1-201ENST00000342245 SPTA1P02549 2419 aa13.06□□□□□ -0.32
SMPD1-201ENST00000342245 LOC110117498A0A087WWA1 95 aa13.05□□□□□ -0.32
SMPD1-201ENST00000342245 SNURFQ9Y675 71 aa13.05□□□□□ -0.32
SMPD1-201ENST00000342245 NBASA2RRP1 2371 aa13.05□□□□□ -0.32
SMPD1-201ENST00000342245 A0A0U1RQV1 116 aa13.04□□□□□ -0.32
SMPD1-201ENST00000342245 UBE2L6O14933 153 aa13.04□□□□□ -0.32
SMPD1-201ENST00000342245 TOMM7Q9P0U1 55 aa13.04□□□□□ -0.32
SMPD1-201ENST00000342245 A6NDX4 124 aa13.04□□□□□ -0.32
SMPD1-201ENST00000342245 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
SMPD1-201ENST00000342245 LMO4P61968 165 aa13.03□□□□□ -0.32
SMPD1-201ENST00000342245 ERC2-IT1O76042 136 aa13.02□□□□□ -0.32
SMPD1-201ENST00000342245 Q6ZQT0 140 aa13.02□□□□□ -0.32
SMPD1-201ENST00000342245 HRNRQ86YZ3 2850 aaPredicted RBP13.02□□□□□ -0.32
SMPD1-201ENST00000342245 PDE6GP18545 87 aa13.02□□□□□ -0.33
SMPD1-201ENST00000342245 TMEM89A2RUT3 159 aa13.01□□□□□ -0.33
SMPD1-201ENST00000342245 MIFP14174 115 aa13.01□□□□□ -0.33
SMPD1-201ENST00000342245 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
SMPD1-201ENST00000342245 SVEP1Q4LDE5 3571 aa13.01□□□□□ -0.33
SMPD1-201ENST00000342245 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
SMPD1-201ENST00000342245 IGF2RP11717 2491 aa13□□□□□ -0.33
SMPD1-201ENST00000342245 A0A1W2PPR1 153 aa13□□□□□ -0.33
SMPD1-201ENST00000342245 LY6EQ16553 131 aa13□□□□□ -0.33
SMPD1-201ENST00000342245 ATRXP46100 2492 aa13□□□□□ -0.33
SMPD1-201ENST00000342245 DOPEY2Q9Y3R5 2298 aa12.99□□□□□ -0.33
SMPD1-201ENST00000342245 H3BQ85 93 aa12.99□□□□□ -0.33
SMPD1-201ENST00000342245 LAMTOR3Q9UHA4 124 aa12.99□□□□□ -0.33
SMPD1-201ENST00000342245 TRBV7-4A0A0J9YYF1 115 aa12.99□□□□□ -0.33
SMPD1-201ENST00000342245 ZNF561-AS1K7EIQ3 104 aa12.98□□□□□ -0.33
SMPD1-201ENST00000342245 H3BUX3 64 aa12.97□□□□□ -0.33
SMPD1-201ENST00000342245 HAMPP81172 84 aa12.97□□□□□ -0.33
SMPD1-201ENST00000342245 Q6ZVQ6 151 aa12.97□□□□□ -0.33
SMPD1-201ENST00000342245 C11orf44Q8N8P7 122 aa12.97□□□□□ -0.33
SMPD1-201ENST00000342245 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
SMPD1-201ENST00000342245 A0A087WZ39 114 aa12.96□□□□□ -0.33
SMPD1-201ENST00000342245 INSP01308 110 aa12.96□□□□□ -0.33
SMPD1-201ENST00000342245 DEFB131AP59861 70 aa12.96□□□□□ -0.34
SMPD1-201ENST00000342245 Q6ZTI0 123 aa12.96□□□□□ -0.34
SMPD1-201ENST00000342245 C6orf223Q8N319 242 aa12.96□□□□□ -0.34
SMPD1-201ENST00000342245 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
SMPD1-201ENST00000342245 PRM2P04554 102 aa12.94□□□□□ -0.34
SMPD1-201ENST00000342245 BRD3OSQ6XYD6 125 aa12.94□□□□□ -0.34
SMPD1-201ENST00000342245 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
SMPD1-201ENST00000342245 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
SMPD1-201ENST00000342245 ASH1LQ9NR48 2969 aaKnown RBP12.93□□□□□ -0.34
SMPD1-201ENST00000342245 Q8N3U1 123 aa12.93□□□□□ -0.34
SMPD1-201ENST00000342245 BPESC1Q9GZL8 116 aa12.93□□□□□ -0.34
SMPD1-201ENST00000342245 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
SMPD1-201ENST00000342245 A0A096LNT2 108 aa12.92□□□□□ -0.34
SMPD1-201ENST00000342245 NANOS2P60321 138 aaKnown RBP12.92□□□□□ -0.34
SMPD1-201ENST00000342245 DYNLRB2Q8TF09 96 aa12.92□□□□□ -0.34
SMPD1-201ENST00000342245 TMEM254Q8TBM7 123 aa12.91□□□□□ -0.34
SMPD1-201ENST00000342245 NREPQ16612 68 aa12.9□□□□□ -0.34
SMPD1-201ENST00000342245 PLAC8L1A1L4L8 177 aa12.9□□□□□ -0.34
SMPD1-201ENST00000342245 ESRGQ1W209 222 aa12.9□□□□□ -0.34
SMPD1-201ENST00000342245 C6orf226Q5I0X4 101 aa12.9□□□□□ -0.34
SMPD1-201ENST00000342245 PRR15Q8IV56 129 aa12.9□□□□□ -0.34
SMPD1-201ENST00000342245 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
SMPD1-201ENST00000342245 C1orf158Q8N1D5 194 aa12.89□□□□□ -0.35
SMPD1-201ENST00000342245 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
SMPD1-201ENST00000342245 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
SMPD1-201ENST00000342245 LINC00575Q6W349 94 aa12.88□□□□□ -0.35
SMPD1-201ENST00000342245 TRGV1A0A0A0MS02 117 aa12.88□□□□□ -0.35
SMPD1-201ENST00000342245 FAM229BQ4G0N7 80 aa12.87□□□□□ -0.35
SMPD1-201ENST00000342245 MPLKIPQ8TAP9 179 aa12.87□□□□□ -0.35
SMPD1-201ENST00000342245 C11orf68Q9H3H3 251 aaKnown RBP12.87□□□□□ -0.35
SMPD1-201ENST00000342245 PMAIP1Q13794 54 aa12.87□□□□□ -0.35
SMPD1-201ENST00000342245 SPTBN1Q01082 2364 aaKnown RBP12.87□□□□□ -0.35
SMPD1-201ENST00000342245 COX17Q14061 63 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms