RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RPL32P62910 135 aaKnown RBP12.8□□□□□ -0.36
SYNE2-201ENST00000341472 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
SYNE2-201ENST00000341472 NPYP01303 97 aa12.79□□□□□ -0.36
SYNE2-201ENST00000341472 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
SYNE2-201ENST00000341472 MAP1LC3AQ9H492 121 aa12.79□□□□□ -0.36
SYNE2-201ENST00000341472 PLAC8Q9NZF1 115 aa12.79□□□□□ -0.36
SYNE2-201ENST00000341472 ZNF561-AS1K7EIQ3 104 aa12.78□□□□□ -0.36
SYNE2-201ENST00000341472 MAJINQ3KP22 176 aa12.78□□□□□ -0.36
SYNE2-201ENST00000341472 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
SYNE2-201ENST00000341472 TRAV13-1A0A0B4J241 112 aa12.77□□□□□ -0.37
SYNE2-201ENST00000341472 IGKV2-24A0A0C4DH68 120 aa12.77□□□□□ -0.37
SYNE2-201ENST00000341472 FAT3Q8TDW7 4589 aa12.76□□□□□ -0.37
SYNE2-201ENST00000341472 COX7A2LO14548 114 aa12.76□□□□□ -0.37
SYNE2-201ENST00000341472 MALP21145 153 aa12.76□□□□□ -0.37
SYNE2-201ENST00000341472 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
SYNE2-201ENST00000341472 HNRNPA3P51991 378 aaKnown RBP12.75□□□□□ -0.37
SYNE2-201ENST00000341472 SYCNQ0VAF6 134 aa12.75□□□□□ -0.37
SYNE2-201ENST00000341472 SMIM2Q9BVW6 85 aa12.75□□□□□ -0.37
SYNE2-201ENST00000341472 NXT2Q9NPJ8 142 aaKnown RBP12.75□□□□□ -0.37
SYNE2-201ENST00000341472 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
SYNE2-201ENST00000341472 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
SYNE2-201ENST00000341472 CARD19Q96LW7 228 aa12.74□□□□□ -0.37
SYNE2-201ENST00000341472 LINC00474Q9P2X8 69 aa12.74□□□□□ -0.37
SYNE2-201ENST00000341472 Q6ZUT4 128 aa12.73□□□□□ -0.37
SYNE2-201ENST00000341472 STPG4Q8N801 248 aa12.73□□□□□ -0.37
SYNE2-201ENST00000341472 C18orf32Q8TCD1 76 aa12.73□□□□□ -0.37
SYNE2-201ENST00000341472 LOC389332A0A1B0GUA5 103 aa12.72□□□□□ -0.37
SYNE2-201ENST00000341472 K7EMI3 77 aa12.72□□□□□ -0.37
SYNE2-201ENST00000341472 RAB5BP61020 215 aa12.72□□□□□ -0.37
SYNE2-201ENST00000341472 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
SYNE2-201ENST00000341472 C5orf38Q86SI9 138 aa12.72□□□□□ -0.37
SYNE2-201ENST00000341472 Q8N8P6 123 aa12.72□□□□□ -0.37
SYNE2-201ENST00000341472 PKHD1L1Q86WI1 4243 aa12.72□□□□□ -0.37
SYNE2-201ENST00000341472 A0A096LNI7 61 aa12.71□□□□□ -0.37
SYNE2-201ENST00000341472 SPANXA1Q9NS26 97 aa12.71□□□□□ -0.37
SYNE2-201ENST00000341472 IGLV4-69A0A075B6H9 119 aa12.7□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BKO60814 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 APOMO95445 188 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BJP06899 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BOP23527 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BBP33778 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BDP58876 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BCP62807 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST2H2BEQ16778 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-201ENST00000341472 FA2HQ7L5A8 372 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BHQ93079 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BNQ99877 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 HIST1H2BMQ99879 126 aa12.69□□□□□ -0.38
SYNE2-201ENST00000341472 MRPS36P82909 103 aaKnown RBP12.68□□□□□ -0.38
SYNE2-201ENST00000341472 Q6ZRU5 148 aa12.68□□□□□ -0.38
SYNE2-201ENST00000341472 BAGE3Q86Y29 109 aa12.68□□□□□ -0.38
SYNE2-201ENST00000341472 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-201ENST00000341472 LINC00614P0C842 121 aa12.67□□□□□ -0.38
SYNE2-201ENST00000341472 G0S2P27469 103 aa12.67□□□□□ -0.38
SYNE2-201ENST00000341472 FAM104AQ969W3 186 aa12.67□□□□□ -0.38
SYNE2-201ENST00000341472 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
SYNE2-201ENST00000341472 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
SYNE2-201ENST00000341472 LINC01546A6NGU7 62 aa12.66□□□□□ -0.38
SYNE2-201ENST00000341472 ORMDL2Q53FV1 153 aa12.66□□□□□ -0.38
SYNE2-201ENST00000341472 SERTAD4-AS1Q5TG53 156 aa12.66□□□□□ -0.38
SYNE2-201ENST00000341472 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
SYNE2-201ENST00000341472 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
SYNE2-201ENST00000341472 CHCHD1Q96BP2 118 aaKnown RBP12.65□□□□□ -0.38
SYNE2-201ENST00000341472 IFITM10A6NMD0 228 aa12.64□□□□□ -0.39
SYNE2-201ENST00000341472 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
SYNE2-201ENST00000341472 PTTG1IPP53801 180 aa12.63□□□□□ -0.39
SYNE2-201ENST00000341472 SPAG11BQ08648 103 aa12.63□□□□□ -0.39
SYNE2-201ENST00000341472 PYGO1Q9Y3Y4 419 aa12.63□□□□□ -0.39
SYNE2-201ENST00000341472 LINC01549A6NIU2 74 aa12.62□□□□□ -0.39
SYNE2-201ENST00000341472 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
SYNE2-201ENST00000341472 NDUFA6P56556 154 aa12.61□□□□□ -0.39
SYNE2-201ENST00000341472 COA6Q5JTJ3 125 aaKnown RBP12.61□□□□□ -0.39
SYNE2-201ENST00000341472 URB1-AS1Q96HZ7 61 aa12.61□□□□□ -0.39
SYNE2-201ENST00000341472 HSBP1O75506 76 aa12.6□□□□□ -0.39
SYNE2-201ENST00000341472 SERF1AO75920 110 aa12.6□□□□□ -0.39
SYNE2-201ENST00000341472 ORAOV1Q8WV07 137 aa12.6□□□□□ -0.39
SYNE2-201ENST00000341472 F8WDY8 70 aa12.59□□□□□ -0.39
SYNE2-201ENST00000341472 PRR3P79522 188 aaKnown RBP12.59□□□□□ -0.39
SYNE2-201ENST00000341472 RNF151Q2KHN1 245 aa12.59□□□□□ -0.39
SYNE2-201ENST00000341472 IGLV4-3A0A075B6K6 122 aa12.58□□□□□ -0.4
SYNE2-201ENST00000341472 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-201ENST00000341472 S100A6P06703 90 aa12.58□□□□□ -0.4
SYNE2-201ENST00000341472 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
SYNE2-201ENST00000341472 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
SYNE2-201ENST00000341472 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
SYNE2-201ENST00000341472 HMCN2Q8NDA2 5059 aa12.56□□□□□ -0.4
SYNE2-201ENST00000341472 A0A1W2PNN7 141 aa12.56□□□□□ -0.4
SYNE2-201ENST00000341472 C2orf66Q6UXQ4 117 aa12.56□□□□□ -0.4
SYNE2-201ENST00000341472 MRPL35Q9NZE8 188 aaKnown RBP12.56□□□□□ -0.4
SYNE2-201ENST00000341472 NDUFA1O15239 70 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 HBDP02042 147 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 MT1HL1P0DM35 61 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 LINC00310P59036 64 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 RPL18AQ02543 176 aaKnown RBP12.55□□□□□ -0.4
SYNE2-201ENST00000341472 LINC00242Q5T6M2 205 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 TEX43Q6ZNM6 134 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 Q6ZRP5 223 aa12.55□□□□□ -0.4
SYNE2-201ENST00000341472 TOMM6Q96B49 74 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms