RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 COX17Q14061 63 aa12.92□□□□□ -0.34
SYDE2-202ENST00000341460 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
SYDE2-202ENST00000341460 RNASE3P12724 160 aaKnown RBP12.91□□□□□ -0.34
SYDE2-202ENST00000341460 SPINK6Q6UWN8 80 aa12.91□□□□□ -0.34
SYDE2-202ENST00000341460 PROK1P58294 105 aa12.91□□□□□ -0.34
SYDE2-202ENST00000341460 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
SYDE2-202ENST00000341460 WNK1Q9H4A3 2382 aa12.91□□□□□ -0.34
SYDE2-202ENST00000341460 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.34
SYDE2-202ENST00000341460 IGKV2-28A0A075B6P5 120 aa12.9□□□□□ -0.34
SYDE2-202ENST00000341460 IGKV2D-28P01615 120 aa12.9□□□□□ -0.34
SYDE2-202ENST00000341460 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
SYDE2-202ENST00000341460 MED12LQ86YW9 2145 aa12.9□□□□□ -0.34
SYDE2-202ENST00000341460 PRO3102Q9H379 93 aa12.9□□□□□ -0.35
SYDE2-202ENST00000341460 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
SYDE2-202ENST00000341460 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
SYDE2-202ENST00000341460 ADAMTS9Q9P2N4 1935 aa12.89□□□□□ -0.35
SYDE2-202ENST00000341460 MUC7Q8TAX7 377 aa12.89□□□□□ -0.35
SYDE2-202ENST00000341460 PLXNB1O43157 2135 aa12.89□□□□□ -0.35
SYDE2-202ENST00000341460 HIVEP2P31629 2446 aa12.89□□□□□ -0.35
SYDE2-202ENST00000341460 CRYGDP07320 174 aa12.88□□□□□ -0.35
SYDE2-202ENST00000341460 CD164L2Q6UWJ8 174 aa12.88□□□□□ -0.35
SYDE2-202ENST00000341460 hDV103S1A0JD37 113 aa12.88□□□□□ -0.35
SYDE2-202ENST00000341460 Q6ZVQ6 151 aa12.88□□□□□ -0.35
SYDE2-202ENST00000341460 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
SYDE2-202ENST00000341460 LY6LH3BQJ8 138 aa12.87□□□□□ -0.35
SYDE2-202ENST00000341460 LINC01547P58512 204 aaPredicted RBP12.87□□□□□ -0.35
SYDE2-202ENST00000341460 ZNF843Q8N446 348 aa12.87□□□□□ -0.35
SYDE2-202ENST00000341460 A0A096LNJ9 63 aa12.86□□□□□ -0.35
SYDE2-202ENST00000341460 BCE1O60756 84 aa12.86□□□□□ -0.35
SYDE2-202ENST00000341460 KIAA1549Q9HCM3 1950 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 DEFB131BA0A096LNP1 70 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 ADAMTSL4-AS1Q5T5F5 129 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 KIAA1549LQ6ZVL6 1849 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 PCDH15Q96QU1 1955 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 ACACBO00763 2458 aa12.85□□□□□ -0.35
SYDE2-202ENST00000341460 SMCPP49901 116 aaPredicted RBP12.84□□□□□ -0.35
SYDE2-202ENST00000341460 LINC00959A0A1B0GUT2 108 aa12.84□□□□□ -0.35
SYDE2-202ENST00000341460 Q8IZM0 81 aa12.84□□□□□ -0.35
SYDE2-202ENST00000341460 H0Y9P7 68 aa12.83□□□□□ -0.36
SYDE2-202ENST00000341460 PCOTHQ58A44 107 aa12.83□□□□□ -0.36
SYDE2-202ENST00000341460 C11orf71Q6IPW1 123 aa12.83□□□□□ -0.36
SYDE2-202ENST00000341460 SPG11Q96JI7 2443 aa12.83□□□□□ -0.36
SYDE2-202ENST00000341460 PCNX3Q9H6A9 2034 aa12.82□□□□□ -0.36
SYDE2-202ENST00000341460 PRR9Q5T870 116 aa12.82□□□□□ -0.36
SYDE2-202ENST00000341460 PRO0461Q9UI25 63 aa12.82□□□□□ -0.36
SYDE2-202ENST00000341460 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
SYDE2-202ENST00000341460 SPAG11AQ6PDA7 123 aa12.82□□□□□ -0.36
SYDE2-202ENST00000341460 ANKHD1Q8IWZ3 2542 aaKnown RBP12.82□□□□□ -0.36
SYDE2-202ENST00000341460 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
SYDE2-202ENST00000341460 LINC00575Q6W349 94 aa12.8□□□□□ -0.36
SYDE2-202ENST00000341460 SMIM1B2RUZ4 78 aa12.8□□□□□ -0.36
SYDE2-202ENST00000341460 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
SYDE2-202ENST00000341460 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.79□□□□□ -0.36
SYDE2-202ENST00000341460 EP400Q96L91 3159 aa12.79□□□□□ -0.36
SYDE2-202ENST00000341460 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
SYDE2-202ENST00000341460 F8WDY8 70 aa12.78□□□□□ -0.36
SYDE2-202ENST00000341460 PSMG3-AS1Q96PY0 264 aa12.78□□□□□ -0.36
SYDE2-202ENST00000341460 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.78□□□□□ -0.36
SYDE2-202ENST00000341460 LINC00482Q8N8I6 264 aa12.78□□□□□ -0.36
SYDE2-202ENST00000341460 KLLNB2CW77 178 aa12.78□□□□□ -0.36
SYDE2-202ENST00000341460 ALPK3Q96L96 1907 aa12.77□□□□□ -0.37
SYDE2-202ENST00000341460 TANC2Q9HCD6 1990 aa12.77□□□□□ -0.37
SYDE2-202ENST00000341460 PRR14LQ5THK1 2151 aa12.76□□□□□ -0.37
SYDE2-202ENST00000341460 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
SYDE2-202ENST00000341460 RPL37AP8A6NKH3 93 aa12.76□□□□□ -0.37
SYDE2-202ENST00000341460 C10orf25Q5T742 122 aa12.76□□□□□ -0.37
SYDE2-202ENST00000341460 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
SYDE2-202ENST00000341460 CD164Q04900 197 aa12.75□□□□□ -0.37
SYDE2-202ENST00000341460 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
SYDE2-202ENST00000341460 HCG22E2RYF7 251 aa12.74□□□□□ -0.37
SYDE2-202ENST00000341460 C8orf87E5RJ46 101 aa12.73□□□□□ -0.37
SYDE2-202ENST00000341460 IGLV9-49A0A0B4J1Y8 123 aa12.73□□□□□ -0.37
SYDE2-202ENST00000341460 ARHGAP32A7KAX9 2087 aa12.72□□□□□ -0.37
SYDE2-202ENST00000341460 ZNF706Q9Y5V0 76 aaPredicted RBP12.72□□□□□ -0.37
SYDE2-202ENST00000341460 LY6G6DO95868 133 aa12.72□□□□□ -0.37
SYDE2-202ENST00000341460 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
SYDE2-202ENST00000341460 TRAV10A0A0B4J240 114 aa12.72□□□□□ -0.37
SYDE2-202ENST00000341460 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
SYDE2-202ENST00000341460 BBC3Q96PG8 261 aaPredicted RBP12.71□□□□□ -0.37
SYDE2-202ENST00000341460 IGLV2-18A0A075B6J9 118 aa12.71□□□□□ -0.38
SYDE2-202ENST00000341460 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.38
SYDE2-202ENST00000341460 AMELXQ99217 191 aa12.71□□□□□ -0.38
SYDE2-202ENST00000341460 FAM19A4Q96LR4 140 aa12.7□□□□□ -0.38
SYDE2-202ENST00000341460 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
SYDE2-202ENST00000341460 LINC01006Q8NI28 216 aa12.69□□□□□ -0.38
SYDE2-202ENST00000341460 SBSPONQ8IVN8 264 aa12.69□□□□□ -0.38
SYDE2-202ENST00000341460 CYSRT1A8MQ03 144 aa12.69□□□□□ -0.38
SYDE2-202ENST00000341460 Q9UF83 564 aa12.69□□□□□ -0.38
SYDE2-202ENST00000341460 LOC100131303A0A0U1RQF7 123 aa12.68□□□□□ -0.38
SYDE2-202ENST00000341460 COX6A2Q02221 97 aa12.68□□□□□ -0.38
SYDE2-202ENST00000341460 C1orf64Q8NEQ6 169 aa12.68□□□□□ -0.38
SYDE2-202ENST00000341460 PRR3P79522 188 aaKnown RBP12.68□□□□□ -0.38
SYDE2-202ENST00000341460 MRGPRG-AS1Q2M3A8 158 aa12.67□□□□□ -0.38
SYDE2-202ENST00000341460 C7orf33Q8WU49 177 aa12.67□□□□□ -0.38
SYDE2-202ENST00000341460 SORL1Q92673 2214 aa12.66□□□□□ -0.38
SYDE2-202ENST00000341460 SMIM29Q86T20 159 aa12.66□□□□□ -0.38
SYDE2-202ENST00000341460 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms