RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SERF1AO75920 110 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 G0S2P27469 103 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 UBE2D1P51668 147 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 LINC00242Q5T6M2 205 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 ERASQ7Z444 233 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 AMELXQ99217 191 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
TUBD1-202ENST00000340993 H0Y8G0 127 aa8.6□□□□□ -1.03
TUBD1-202ENST00000340993 NUPR1O60356 82 aa8.6□□□□□ -1.03
TUBD1-202ENST00000340993 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
TUBD1-202ENST00000340993 RYR1P21817 5038 aa8.6□□□□□ -1.03
TUBD1-202ENST00000340993 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
TUBD1-202ENST00000340993 HSBP1O75506 76 aa8.59□□□□□ -1.03
TUBD1-202ENST00000340993 SLPIP03973 132 aa8.59□□□□□ -1.03
TUBD1-202ENST00000340993 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
TUBD1-202ENST00000340993 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
TUBD1-202ENST00000340993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.58□□□□□ -1.04
TUBD1-202ENST00000340993 LINC00310P59036 64 aa8.58□□□□□ -1.04
TUBD1-202ENST00000340993 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
TUBD1-202ENST00000340993 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
TUBD1-202ENST00000340993 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 FAM30AQ9NZY2 134 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 HSPG2P98160 4391 aa8.57□□□□□ -1.04
TUBD1-202ENST00000340993 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 ZNF561-AS1K7EIQ3 104 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 FABP4P15090 132 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 PDZD11Q5EBL8 140 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 CST9LQ9H4G1 147 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 GEMIN7Q9H840 131 aaKnown RBP8.56□□□□□ -1.04
TUBD1-202ENST00000340993 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
TUBD1-202ENST00000340993 PMVKQ15126 192 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 LINC00469Q8N7U9 141 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 TOMM7Q9P0U1 55 aa8.56□□□□□ -1.04
TUBD1-202ENST00000340993 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
TUBD1-202ENST00000340993 APOMO95445 188 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 IGHV3-64A0A075B6Q5 118 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
TUBD1-202ENST00000340993 ATP5LO75964 103 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 NPSP0C0P6 89 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
TUBD1-202ENST00000340993 CAMK2N2Q96S95 79 aa8.53□□□□□ -1.04
TUBD1-202ENST00000340993 A0A087WZ39 114 aa8.52□□□□□ -1.05
TUBD1-202ENST00000340993 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
TUBD1-202ENST00000340993 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
TUBD1-202ENST00000340993 HERVK_113P63121 156 aa8.52□□□□□ -1.05
TUBD1-202ENST00000340993 Q6ZRU5 148 aa8.52□□□□□ -1.05
TUBD1-202ENST00000340993 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
TUBD1-202ENST00000340993 HERC2O95714 4834 aa8.51□□□□□ -1.05
TUBD1-202ENST00000340993 LINC01549A6NIU2 74 aa8.51□□□□□ -1.05
TUBD1-202ENST00000340993 PANO1I0J062 215 aa8.51□□□□□ -1.05
TUBD1-202ENST00000340993 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
TUBD1-202ENST00000340993 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
TUBD1-202ENST00000340993 C2orf82Q6UX34 121 aa8.51□□□□□ -1.05
TUBD1-202ENST00000340993 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 XGP55808 180 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 C10orf25Q5T742 122 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 DPH3Q96FX2 82 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
TUBD1-202ENST00000340993 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
TUBD1-202ENST00000340993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
TUBD1-202ENST00000340993 FAT1Q14517 4588 aa8.49□□□□□ -1.05
TUBD1-202ENST00000340993 PRSS2P07478 247 aa8.49□□□□□ -1.05
TUBD1-202ENST00000340993 SEC11AP67812 179 aa8.49□□□□□ -1.05
TUBD1-202ENST00000340993 UNQ6190/PRO20217Q6UXQ8 127 aa8.49□□□□□ -1.05
TUBD1-202ENST00000340993 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
TUBD1-202ENST00000340993 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
TUBD1-202ENST00000340993 OR10D4PQ8NGN7 298 aa8.48□□□□□ -1.05
TUBD1-202ENST00000340993 KRTAP17-1Q9BYP8 105 aa8.48□□□□□ -1.05
TUBD1-202ENST00000340993 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
TUBD1-202ENST00000340993 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
TUBD1-202ENST00000340993 FAM19A3Q7Z5A8 133 aa8.48□□□□□ -1.05
TUBD1-202ENST00000340993 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
TUBD1-202ENST00000340993 SMIM1B2RUZ4 78 aa8.47□□□□□ -1.05
TUBD1-202ENST00000340993 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
TUBD1-202ENST00000340993 IGLC3P0DOY3 106 aa8.47□□□□□ -1.05
TUBD1-202ENST00000340993 ZNF22P17026 224 aaPredicted RBP8.47□□□□□ -1.05
TUBD1-202ENST00000340993 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
TUBD1-202ENST00000340993 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
TUBD1-202ENST00000340993 SCXQ7RTU7 201 aa8.47□□□□□ -1.05
TUBD1-202ENST00000340993 A0A096LNI7 61 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms