RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 C2orf48Q96LS8 159 aa10.59□□□□□ -0.71
BRCC3-202ENST00000340647 A0A0J9YXV3 536 aa10.58□□□□□ -0.72
BRCC3-202ENST00000340647 CLLU1Q5K131 121 aa10.58□□□□□ -0.72
BRCC3-202ENST00000340647 C7orf33Q8WU49 177 aa10.58□□□□□ -0.72
BRCC3-202ENST00000340647 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
BRCC3-202ENST00000340647 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
BRCC3-202ENST00000340647 GAGE2BQ13066 116 aa10.57□□□□□ -0.72
BRCC3-202ENST00000340647 C10orf25Q5T742 122 aa10.57□□□□□ -0.72
BRCC3-202ENST00000340647 CAMK2N2Q96S95 79 aa10.57□□□□□ -0.72
BRCC3-202ENST00000340647 LINC00474Q9P2X8 69 aa10.57□□□□□ -0.72
BRCC3-202ENST00000340647 PYGO1Q9Y3Y4 419 aa10.57□□□□□ -0.72
BRCC3-202ENST00000340647 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 LOC389332A0A1B0GUA5 103 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 APOMO95445 188 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 SPAG11BQ08648 103 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
BRCC3-202ENST00000340647 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 ZC2HC1BQ5TFG8 222 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 LINC00173Q6ZV60 143 aa10.56□□□□□ -0.72
BRCC3-202ENST00000340647 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
BRCC3-202ENST00000340647 LINC00242Q5T6M2 205 aa10.55□□□□□ -0.72
BRCC3-202ENST00000340647 IFITM10A6NMD0 228 aa10.54□□□□□ -0.72
BRCC3-202ENST00000340647 RAB14P61106 215 aa10.54□□□□□ -0.72
BRCC3-202ENST00000340647 Q8N8P6 123 aa10.54□□□□□ -0.72
BRCC3-202ENST00000340647 OR10D4PQ8NGN7 298 aa10.54□□□□□ -0.72
BRCC3-202ENST00000340647 ORAOV1Q8WV07 137 aa10.54□□□□□ -0.72
BRCC3-202ENST00000340647 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
BRCC3-202ENST00000340647 RNF213Q63HN8 5207 aa10.53□□□□□ -0.72
BRCC3-202ENST00000340647 ODF1Q14990 250 aa10.53□□□□□ -0.72
BRCC3-202ENST00000340647 RNF151Q2KHN1 245 aa10.53□□□□□ -0.72
BRCC3-202ENST00000340647 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
BRCC3-202ENST00000340647 LRP2P98164 4655 aa10.52□□□□□ -0.72
BRCC3-202ENST00000340647 A0A087WZ39 114 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 RAB5AP20339 215 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 C9orf116Q5BN46 136 aaPredicted RBP10.52□□□□□ -0.73
BRCC3-202ENST00000340647 UNQ6190/PRO20217Q6UXQ8 127 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
BRCC3-202ENST00000340647 IGIPA6NJ69 53 aa10.51□□□□□ -0.73
BRCC3-202ENST00000340647 IFI27P40305 119 aaPredicted RBP10.51□□□□□ -0.73
BRCC3-202ENST00000340647 UBE2D1P51668 147 aa10.51□□□□□ -0.73
BRCC3-202ENST00000340647 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
BRCC3-202ENST00000340647 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
BRCC3-202ENST00000340647 AMELXQ99217 191 aa10.51□□□□□ -0.73
BRCC3-202ENST00000340647 TMEM218A2RU14 115 aa10.5□□□□□ -0.73
BRCC3-202ENST00000340647 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
BRCC3-202ENST00000340647 Q6ZRP5 223 aa10.5□□□□□ -0.73
BRCC3-202ENST00000340647 TMEM141Q96I45 108 aa10.5□□□□□ -0.73
BRCC3-202ENST00000340647 FAM168BA1KXE4 195 aa10.49□□□□□ -0.73
BRCC3-202ENST00000340647 TLX1NBP0CAT3 122 aa10.49□□□□□ -0.73
BRCC3-202ENST00000340647 RPL18AQ02543 176 aaKnown RBP10.49□□□□□ -0.73
BRCC3-202ENST00000340647 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
BRCC3-202ENST00000340647 IMMP2LQ96T52 175 aa10.49□□□□□ -0.73
BRCC3-202ENST00000340647 KRTAP10-8P60410 259 aa10.48□□□□□ -0.73
BRCC3-202ENST00000340647 KIAA1644Q3SXP7 199 aa10.48□□□□□ -0.73
BRCC3-202ENST00000340647 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
BRCC3-202ENST00000340647 F8WDY8 70 aa10.47□□□□□ -0.73
BRCC3-202ENST00000340647 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
BRCC3-202ENST00000340647 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
BRCC3-202ENST00000340647 PSORS1C2Q9UIG4 136 aa10.47□□□□□ -0.73
BRCC3-202ENST00000340647 CYSLTR1Q9Y271 337 aa10.47□□□□□ -0.73
BRCC3-202ENST00000340647 NDUFA1O15239 70 aa10.46□□□□□ -0.73
BRCC3-202ENST00000340647 UQCC3Q6UW78 93 aa10.46□□□□□ -0.73
BRCC3-202ENST00000340647 TGIF2-C20orf24A0A0A6YYL0 155 aa10.45□□□□□ -0.74
BRCC3-202ENST00000340647 TEX43Q6ZNM6 134 aa10.45□□□□□ -0.74
BRCC3-202ENST00000340647 CTDSP1Q9GZU7 261 aa10.45□□□□□ -0.74
BRCC3-202ENST00000340647 ORMDL2Q53FV1 153 aa10.44□□□□□ -0.74
BRCC3-202ENST00000340647 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
BRCC3-202ENST00000340647 K7EMI3 77 aa10.43□□□□□ -0.74
BRCC3-202ENST00000340647 SEC11CQ9BY50 192 aa10.43□□□□□ -0.74
BRCC3-202ENST00000340647 NXT2Q9NPJ8 142 aaKnown RBP10.43□□□□□ -0.74
BRCC3-202ENST00000340647 NPSP0C0P6 89 aa10.42□□□□□ -0.74
BRCC3-202ENST00000340647 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
BRCC3-202ENST00000340647 TOMM6Q96B49 74 aa10.42□□□□□ -0.74
BRCC3-202ENST00000340647 VCX2Q9H322 139 aa10.42□□□□□ -0.74
BRCC3-202ENST00000340647 TRAV9-1A0A075B6T8 112 aa10.41□□□□□ -0.74
BRCC3-202ENST00000340647 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
BRCC3-202ENST00000340647 C9orf129Q5T035 196 aaKnown RBP10.41□□□□□ -0.74
BRCC3-202ENST00000340647 GAGE2EQ4V326 116 aa10.4□□□□□ -0.74
BRCC3-202ENST00000340647 TIMM17AQ99595 171 aa10.4□□□□□ -0.74
BRCC3-202ENST00000340647 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-202ENST00000340647 GAGE2DQ9UEU5 116 aa10.4□□□□□ -0.74
BRCC3-202ENST00000340647 CDKN2A-AS1Q9UH64 79 aa10.4□□□□□ -0.74
BRCC3-202ENST00000340647 TRBV30A0A0K0K1B3 111 aa10.39□□□□□ -0.75
BRCC3-202ENST00000340647 C2orf88Q9BSF0 95 aa10.39□□□□□ -0.75
BRCC3-202ENST00000340647 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
BRCC3-202ENST00000340647 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
BRCC3-202ENST00000340647 Q6ZN92 141 aa10.38□□□□□ -0.75
BRCC3-202ENST00000340647 FAM19A5Q7Z5A7 132 aaPredicted RBP10.38□□□□□ -0.75
BRCC3-202ENST00000340647 COMMD7Q86VX2 200 aa10.38□□□□□ -0.75
BRCC3-202ENST00000340647 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
BRCC3-202ENST00000340647 MT-ND6P03923 174 aa10.37□□□□□ -0.75
BRCC3-202ENST00000340647 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
BRCC3-202ENST00000340647 ERASQ7Z444 233 aa10.36□□□□□ -0.75
BRCC3-202ENST00000340647 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
BRCC3-202ENST00000340647 IGLV7-43P04211 117 aa10.35□□□□□ -0.75
BRCC3-202ENST00000340647 Q8IZM0 81 aa10.35□□□□□ -0.75
BRCC3-202ENST00000340647 HERVK_113P63121 156 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms