RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TCAPO15273 167 aa12.19□□□□□ -0.46
ITGA4-202ENST00000339307 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
ITGA4-202ENST00000339307 KIR2DL4Q99706 377 aa12.19□□□□□ -0.46
ITGA4-202ENST00000339307 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
ITGA4-202ENST00000339307 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
ITGA4-202ENST00000339307 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
ITGA4-202ENST00000339307 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
ITGA4-202ENST00000339307 C1orf196B1AJZ1 125 aa12.17□□□□□ -0.46
ITGA4-202ENST00000339307 GAGE2BQ13066 116 aa12.17□□□□□ -0.46
ITGA4-202ENST00000339307 UBR4Q5T4S7 5183 aa12.17□□□□□ -0.46
ITGA4-202ENST00000339307 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
ITGA4-202ENST00000339307 COX7A2LO14548 114 aa12.16□□□□□ -0.46
ITGA4-202ENST00000339307 YPEL4Q96NS1 127 aa12.16□□□□□ -0.46
ITGA4-202ENST00000339307 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
ITGA4-202ENST00000339307 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
ITGA4-202ENST00000339307 NPYP01303 97 aa12.14□□□□□ -0.47
ITGA4-202ENST00000339307 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
ITGA4-202ENST00000339307 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
ITGA4-202ENST00000339307 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
ITGA4-202ENST00000339307 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
ITGA4-202ENST00000339307 LOC107984640A0A0U1RRK4 108 aa12.12□□□□□ -0.47
ITGA4-202ENST00000339307 S100A1P23297 94 aa12.12□□□□□ -0.47
ITGA4-202ENST00000339307 CBLN2Q8IUK8 224 aa12.12□□□□□ -0.47
ITGA4-202ENST00000339307 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
ITGA4-202ENST00000339307 MAP1LC3AQ9H492 121 aa12.12□□□□□ -0.47
ITGA4-202ENST00000339307 K7EMI3 77 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 PTTG1IPP53801 180 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 FABP9Q0Z7S8 132 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 Q6ZUT4 128 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 LINC01600Q96MT4 127 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 CSDC2Q9Y534 153 aaKnown RBP12.11□□□□□ -0.47
ITGA4-202ENST00000339307 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 Q6ZRP5 223 aa12.11□□□□□ -0.47
ITGA4-202ENST00000339307 APOMO95445 188 aa12.1□□□□□ -0.47
ITGA4-202ENST00000339307 REG3GQ6UW15 175 aa12.1□□□□□ -0.47
ITGA4-202ENST00000339307 SPINK6Q6UWN8 80 aa12.1□□□□□ -0.47
ITGA4-202ENST00000339307 RPL18AQ02543 176 aaKnown RBP12.09□□□□□ -0.47
ITGA4-202ENST00000339307 ALKBH7Q9BT30 221 aaPredicted RBP12.09□□□□□ -0.47
ITGA4-202ENST00000339307 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
ITGA4-202ENST00000339307 RAB5AP20339 215 aa12.08□□□□□ -0.48
ITGA4-202ENST00000339307 ODF1Q14990 250 aa12.08□□□□□ -0.48
ITGA4-202ENST00000339307 KIAA1644Q3SXP7 199 aa12.08□□□□□ -0.48
ITGA4-202ENST00000339307 Q8N8P6 123 aa12.08□□□□□ -0.48
ITGA4-202ENST00000339307 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
ITGA4-202ENST00000339307 SPAG11BQ08648 103 aa12.07□□□□□ -0.48
ITGA4-202ENST00000339307 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
ITGA4-202ENST00000339307 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
ITGA4-202ENST00000339307 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
ITGA4-202ENST00000339307 A0A1W2PNN7 141 aa12.05□□□□□ -0.48
ITGA4-202ENST00000339307 C2orf48Q96LS8 159 aa12.05□□□□□ -0.48
ITGA4-202ENST00000339307 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
ITGA4-202ENST00000339307 G0S2P27469 103 aa12.04□□□□□ -0.48
ITGA4-202ENST00000339307 C9orf116Q5BN46 136 aaPredicted RBP12.04□□□□□ -0.48
ITGA4-202ENST00000339307 COLCA2A8K830 154 aa12.03□□□□□ -0.48
ITGA4-202ENST00000339307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
ITGA4-202ENST00000339307 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
ITGA4-202ENST00000339307 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
ITGA4-202ENST00000339307 ORAOV1Q8WV07 137 aa12.03□□□□□ -0.48
ITGA4-202ENST00000339307 SRSF9Q13242 221 aaKnown RBP eCLIP12.02□□□□□ -0.49
ITGA4-202ENST00000339307 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
ITGA4-202ENST00000339307 IFITM10A6NMD0 228 aa12.01□□□□□ -0.49
ITGA4-202ENST00000339307 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
ITGA4-202ENST00000339307 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
ITGA4-202ENST00000339307 SPANXA1Q9NS26 97 aa12.01□□□□□ -0.49
ITGA4-202ENST00000339307 LINC01549A6NIU2 74 aa12□□□□□ -0.49
ITGA4-202ENST00000339307 PHF5AQ7RTV0 110 aaKnown RBP12□□□□□ -0.49
ITGA4-202ENST00000339307 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
ITGA4-202ENST00000339307 NDUFA1O15239 70 aa11.98□□□□□ -0.49
ITGA4-202ENST00000339307 SCO1O75880 301 aa11.98□□□□□ -0.49
ITGA4-202ENST00000339307 RAB5BP61020 215 aa11.98□□□□□ -0.49
ITGA4-202ENST00000339307 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
ITGA4-202ENST00000339307 C18orf32Q8TCD1 76 aa11.98□□□□□ -0.49
ITGA4-202ENST00000339307 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
ITGA4-202ENST00000339307 KRTAP10-8P60410 259 aa11.97□□□□□ -0.49
ITGA4-202ENST00000339307 RNF151Q2KHN1 245 aa11.97□□□□□ -0.49
ITGA4-202ENST00000339307 FA2HQ7L5A8 372 aa11.97□□□□□ -0.49
ITGA4-202ENST00000339307 CYSLTR1Q9Y271 337 aa11.97□□□□□ -0.49
ITGA4-202ENST00000339307 IGHV3OR16-9A0A0B4J2B5 98 aa11.96□□□□□ -0.49
ITGA4-202ENST00000339307 TRGC2P03986 189 aa11.96□□□□□ -0.49
ITGA4-202ENST00000339307 NPSP0C0P6 89 aa11.96□□□□□ -0.49
ITGA4-202ENST00000339307 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
ITGA4-202ENST00000339307 FAM104AQ969W3 186 aa11.96□□□□□ -0.49
ITGA4-202ENST00000339307 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.49
ITGA4-202ENST00000339307 LINC00614P0C842 121 aa11.95□□□□□ -0.5
ITGA4-202ENST00000339307 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
ITGA4-202ENST00000339307 TNXBP22105 4242 aa11.95□□□□□ -0.5
ITGA4-202ENST00000339307 GAGE2EQ4V326 116 aa11.94□□□□□ -0.5
ITGA4-202ENST00000339307 C10orf25Q5T742 122 aa11.94□□□□□ -0.5
ITGA4-202ENST00000339307 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
ITGA4-202ENST00000339307 GAGE2DQ9UEU5 116 aa11.94□□□□□ -0.5
ITGA4-202ENST00000339307 A0A087WZ39 114 aa11.94□□□□□ -0.5
ITGA4-202ENST00000339307 F8WDY8 70 aa11.94□□□□□ -0.5
ITGA4-202ENST00000339307 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
ITGA4-202ENST00000339307 FAM19A5Q7Z5A7 132 aaPredicted RBP11.93□□□□□ -0.5
ITGA4-202ENST00000339307 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
ITGA4-202ENST00000339307 C6orf48Q9UBA6 75 aa11.92□□□□□ -0.5
ITGA4-202ENST00000339307 PAPPA-AS1Q5QFB9 102 aa11.91□□□□□ -0.5
ITGA4-202ENST00000339307 CHCHD1Q96BP2 118 aaKnown RBP11.91□□□□□ -0.5
ITGA4-202ENST00000339307 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
ITGA4-202ENST00000339307 TIMM17AQ99595 171 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms