RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.84
NIPAL3-202ENST00000339255 IGLV10-54A0A075B6I4 117 aa9.77□□□□□ -0.85
NIPAL3-202ENST00000339255 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
NIPAL3-202ENST00000339255 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
NIPAL3-202ENST00000339255 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
NIPAL3-202ENST00000339255 ATOH7Q8N100 152 aa9.77□□□□□ -0.85
NIPAL3-202ENST00000339255 COX11Q9Y6N1 276 aa9.77□□□□□ -0.85
NIPAL3-202ENST00000339255 LY6G6CO95867 125 aa9.76□□□□□ -0.85
NIPAL3-202ENST00000339255 CDKN2A-AS1Q9UH64 79 aa9.76□□□□□ -0.85
NIPAL3-202ENST00000339255 HERVK_113P61574 105 aa9.75□□□□□ -0.85
NIPAL3-202ENST00000339255 COX6A2Q02221 97 aa9.75□□□□□ -0.85
NIPAL3-202ENST00000339255 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
NIPAL3-202ENST00000339255 Q9HAA7 133 aa9.75□□□□□ -0.85
NIPAL3-202ENST00000339255 A0A087WZ39 114 aa9.74□□□□□ -0.85
NIPAL3-202ENST00000339255 COX7A2LO14548 114 aa9.74□□□□□ -0.85
NIPAL3-202ENST00000339255 VAMP8Q9BV40 100 aa9.74□□□□□ -0.85
NIPAL3-202ENST00000339255 S100A12P80511 92 aa9.74□□□□□ -0.85
NIPAL3-202ENST00000339255 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
NIPAL3-202ENST00000339255 TM2D2Q9BX73 214 aa9.74□□□□□ -0.85
NIPAL3-202ENST00000339255 IGKV2D-24A0A075B6R9 120 aa9.73□□□□□ -0.85
NIPAL3-202ENST00000339255 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
NIPAL3-202ENST00000339255 FOXI1Q12951 378 aa9.73□□□□□ -0.85
NIPAL3-202ENST00000339255 TMEM223A0PJW6 202 aa9.72□□□□□ -0.85
NIPAL3-202ENST00000339255 LYSTQ99698 3801 aa9.72□□□□□ -0.85
NIPAL3-202ENST00000339255 hDV102S1A0JD36 115 aa9.71□□□□□ -0.85
NIPAL3-202ENST00000339255 KRTAP26-1Q6PEX3 210 aa9.71□□□□□ -0.85
NIPAL3-202ENST00000339255 Q6ZR54 194 aa9.71□□□□□ -0.85
NIPAL3-202ENST00000339255 STPG4Q8N801 248 aa9.71□□□□□ -0.85
NIPAL3-202ENST00000339255 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.86
NIPAL3-202ENST00000339255 E9PLD3 99 aa9.71□□□□□ -0.86
NIPAL3-202ENST00000339255 MALP21145 153 aa9.71□□□□□ -0.86
NIPAL3-202ENST00000339255 C5orf38Q86SI9 138 aa9.71□□□□□ -0.86
NIPAL3-202ENST00000339255 IGLV5-39A0A0G2JS06 123 aa9.7□□□□□ -0.86
NIPAL3-202ENST00000339255 APOMO95445 188 aa9.7□□□□□ -0.86
NIPAL3-202ENST00000339255 C12orf57Q99622 126 aa9.7□□□□□ -0.86
NIPAL3-202ENST00000339255 IGHV1-58A0A0C4DH39 117 aa9.69□□□□□ -0.86
NIPAL3-202ENST00000339255 SPINK8P0C7L1 97 aa9.69□□□□□ -0.86
NIPAL3-202ENST00000339255 MAJINQ3KP22 176 aa9.69□□□□□ -0.86
NIPAL3-202ENST00000339255 CDPF1Q6NVV7 123 aa9.69□□□□□ -0.86
NIPAL3-202ENST00000339255 PAM16Q9Y3D7 125 aa9.69□□□□□ -0.86
NIPAL3-202ENST00000339255 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
NIPAL3-202ENST00000339255 PLECQ15149 4684 aaKnown RBP9.68□□□□□ -0.86
NIPAL3-202ENST00000339255 SPATA45Q537H7 98 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 LINC00518Q8N0U6 118 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 M0R2N4 97 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 LEPROTO15243 131 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 PSCAO43653 123 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
NIPAL3-202ENST00000339255 IGHV3-64A0A075B6Q5 118 aa9.66□□□□□ -0.86
NIPAL3-202ENST00000339255 LCE6AA0A183 80 aa9.66□□□□□ -0.86
NIPAL3-202ENST00000339255 J3QQQ9 107 aa9.65□□□□□ -0.86
NIPAL3-202ENST00000339255 NMUP48645 174 aa9.65□□□□□ -0.86
NIPAL3-202ENST00000339255 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
NIPAL3-202ENST00000339255 Q8IZM0 81 aa9.65□□□□□ -0.86
NIPAL3-202ENST00000339255 C6orf223Q8N319 242 aa9.65□□□□□ -0.86
NIPAL3-202ENST00000339255 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
NIPAL3-202ENST00000339255 LGALS3P17931 250 aaKnown RBP9.64□□□□□ -0.87
NIPAL3-202ENST00000339255 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
NIPAL3-202ENST00000339255 PRSS2P07478 247 aa9.64□□□□□ -0.87
NIPAL3-202ENST00000339255 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
NIPAL3-202ENST00000339255 COX7B2Q8TF08 81 aa9.64□□□□□ -0.87
NIPAL3-202ENST00000339255 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
NIPAL3-202ENST00000339255 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
NIPAL3-202ENST00000339255 DNAH1Q9P2D7 4330 aa9.62□□□□□ -0.87
NIPAL3-202ENST00000339255 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
NIPAL3-202ENST00000339255 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
NIPAL3-202ENST00000339255 CXCL5P42830 114 aa9.62□□□□□ -0.87
NIPAL3-202ENST00000339255 C15orf56Q8N910 161 aa9.62□□□□□ -0.87
NIPAL3-202ENST00000339255 TOMM7Q9P0U1 55 aa9.62□□□□□ -0.87
NIPAL3-202ENST00000339255 COX8AP10176 69 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 MAPKAPK5-AS1Q8N8E1 139 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 F8WDY8 70 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 NDUFA12Q9UI09 145 aa9.61□□□□□ -0.87
NIPAL3-202ENST00000339255 NDUFA1O15239 70 aa9.6□□□□□ -0.87
NIPAL3-202ENST00000339255 DLEU1O43261 78 aa9.6□□□□□ -0.87
NIPAL3-202ENST00000339255 CKS1BP61024 79 aa9.6□□□□□ -0.87
NIPAL3-202ENST00000339255 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
NIPAL3-202ENST00000339255 MYMXA0A1B0GTQ4 84 aa9.59□□□□□ -0.87
NIPAL3-202ENST00000339255 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
NIPAL3-202ENST00000339255 SLC25A34Q6PIV7 304 aa9.59□□□□□ -0.87
NIPAL3-202ENST00000339255 PCP2Q8IVA1 136 aa9.59□□□□□ -0.87
NIPAL3-202ENST00000339255 TSTD3H0UI37 97 aa9.58□□□□□ -0.88
NIPAL3-202ENST00000339255 HERV-K104P63124 156 aa9.58□□□□□ -0.88
NIPAL3-202ENST00000339255 BOD1L2Q8IYS8 172 aa9.58□□□□□ -0.88
NIPAL3-202ENST00000339255 ZNF625Q96I27 306 aaPredicted RBP9.58□□□□□ -0.88
NIPAL3-202ENST00000339255 C14orf144Q96I85 54 aa9.58□□□□□ -0.88
NIPAL3-202ENST00000339255 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
NIPAL3-202ENST00000339255 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
NIPAL3-202ENST00000339255 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-202ENST00000339255 TTTY13Q9BZ97 58 aa9.57□□□□□ -0.88
NIPAL3-202ENST00000339255 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
NIPAL3-202ENST00000339255 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
NIPAL3-202ENST00000339255 LECT2O14960 151 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms