RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TMEM256-PLSCR3K7ERE1 68 aa9.73□□□□□ -0.85
COL2A1-201ENST00000337299 H3BUA1 57 aa9.73□□□□□ -0.85
COL2A1-201ENST00000337299 ESM1Q9NQ30 184 aa9.72□□□□□ -0.85
COL2A1-201ENST00000337299 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
COL2A1-201ENST00000337299 ANKRD17O75179 2603 aaKnown RBP9.72□□□□□ -0.85
COL2A1-201ENST00000337299 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
COL2A1-201ENST00000337299 V9GYY9 64 aa9.72□□□□□ -0.85
COL2A1-201ENST00000337299 HILS1P60008 231 aa9.71□□□□□ -0.85
COL2A1-201ENST00000337299 C10orf99Q6UWK7 81 aa9.71□□□□□ -0.85
COL2A1-201ENST00000337299 RAI1Q7Z5J4 1906 aaPredicted RBP9.71□□□□□ -0.85
COL2A1-201ENST00000337299 KLLNB2CW77 178 aa9.71□□□□□ -0.85
COL2A1-201ENST00000337299 Q6ZTI0 123 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 LINC00846Q9NV44 126 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 J3QKU1 62 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 MYO15AQ9UKN7 3530 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 K7EMT4 169 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 TIMM17BO60830 172 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 SOSTDC1Q6X4U4 206 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
COL2A1-201ENST00000337299 A0A087WYN8 130 aa9.69□□□□□ -0.86
COL2A1-201ENST00000337299 FAM19A1Q7Z5A9 133 aa9.69□□□□□ -0.86
COL2A1-201ENST00000337299 Q8N2B8 174 aa9.69□□□□□ -0.86
COL2A1-201ENST00000337299 EBI3Q14213 229 aa9.69□□□□□ -0.86
COL2A1-201ENST00000337299 Q6JHZ5 121 aa9.69□□□□□ -0.86
COL2A1-201ENST00000337299 F8WEM9 126 aa9.69□□□□□ -0.86
COL2A1-201ENST00000337299 K7EQG2 157 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 TNFRSF13BO14836 293 aaPredicted RBP9.68□□□□□ -0.86
COL2A1-201ENST00000337299 COX6A2Q02221 97 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 Q8N6K4 173 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 NREPQ16612 68 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 LMO4P61968 165 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 NDUFC2-KCTD14E9PQ53 114 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
COL2A1-201ENST00000337299 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
COL2A1-201ENST00000337299 PRORYQ9H606 182 aa9.67□□□□□ -0.86
COL2A1-201ENST00000337299 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
COL2A1-201ENST00000337299 C1orf195Q5TG92 126 aa9.67□□□□□ -0.86
COL2A1-201ENST00000337299 LRCOL1A6NCL2 159 aa9.66□□□□□ -0.86
COL2A1-201ENST00000337299 ZNF561-AS1K7EIQ3 104 aa9.66□□□□□ -0.86
COL2A1-201ENST00000337299 GYPEP15421 78 aa9.65□□□□□ -0.86
COL2A1-201ENST00000337299 SPTBN5Q9NRC6 3674 aaKnown RBP9.65□□□□□ -0.86
COL2A1-201ENST00000337299 CCL18P55774 89 aa9.65□□□□□ -0.86
COL2A1-201ENST00000337299 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
COL2A1-201ENST00000337299 PRR4Q16378 134 aa9.65□□□□□ -0.87
COL2A1-201ENST00000337299 KIF25-AS1Q9Y6Z4 181 aa9.64□□□□□ -0.87
COL2A1-201ENST00000337299 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
COL2A1-201ENST00000337299 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
COL2A1-201ENST00000337299 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
COL2A1-201ENST00000337299 USP24Q9UPU5 2620 aa9.63□□□□□ -0.87
COL2A1-201ENST00000337299 REV3LO60673 3130 aa9.63□□□□□ -0.87
COL2A1-201ENST00000337299 DEFB113Q30KQ7 82 aa9.63□□□□□ -0.87
COL2A1-201ENST00000337299 CRYGAP11844 174 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 PRR3P79522 188 aaKnown RBP9.62□□□□□ -0.87
COL2A1-201ENST00000337299 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL2A1-201ENST00000337299 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 AMELXQ99217 191 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 LINC00315P59091 139 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 A0A1W2PPR1 153 aa9.62□□□□□ -0.87
COL2A1-201ENST00000337299 LINC00269Q8N2A0 174 aa9.61□□□□□ -0.87
COL2A1-201ENST00000337299 SMCR5Q8TEV8 140 aa9.61□□□□□ -0.87
COL2A1-201ENST00000337299 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
COL2A1-201ENST00000337299 RMI2Q96E14 147 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 FAM218AQ96MZ4 157 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 Q9UF83 564 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 IBA57-AS1B1ANH7 110 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 CHCHD7Q9BUK0 85 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 AKAP13Q12802 2813 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 MUC4Q99102 2169 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 Q6ZQY7 126 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 Q6ZSN1 163 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 MAP6D1Q9H9H5 199 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
COL2A1-201ENST00000337299 TRBV10-1A0A0K0K1A3 114 aa9.59□□□□□ -0.87
COL2A1-201ENST00000337299 RPL28P46779 137 aaKnown RBP9.59□□□□□ -0.87
COL2A1-201ENST00000337299 SERP1Q9Y6X1 66 aa9.59□□□□□ -0.87
COL2A1-201ENST00000337299 A6NDX4 124 aa9.59□□□□□ -0.87
COL2A1-201ENST00000337299 EIF4EBP3O60516 100 aaPredicted RBP9.59□□□□□ -0.87
COL2A1-201ENST00000337299 LINC00337Q8N6G1 96 aa9.59□□□□□ -0.87
COL2A1-201ENST00000337299 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
COL2A1-201ENST00000337299 F8P00451 2351 aa9.58□□□□□ -0.88
COL2A1-201ENST00000337299 CCKP06307 115 aa9.58□□□□□ -0.88
COL2A1-201ENST00000337299 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
COL2A1-201ENST00000337299 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
COL2A1-201ENST00000337299 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
COL2A1-201ENST00000337299 DEFB4AO15263 64 aa9.57□□□□□ -0.88
COL2A1-201ENST00000337299 J3QLI3 93 aa9.57□□□□□ -0.88
COL2A1-201ENST00000337299 BPY2O14599 106 aa9.57□□□□□ -0.88
COL2A1-201ENST00000337299 DIRC1Q969H9 104 aa9.57□□□□□ -0.88
COL2A1-201ENST00000337299 ATRQ13535 2644 aa9.56□□□□□ -0.88
COL2A1-201ENST00000337299 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
COL2A1-201ENST00000337299 C3orf84H3BNL1 204 aa9.56□□□□□ -0.88
COL2A1-201ENST00000337299 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
COL2A1-201ENST00000337299 CMC4P56277 68 aaPredicted RBP9.55□□□□□ -0.88
COL2A1-201ENST00000337299 CDC42SE2Q9NRR3 84 aa9.55□□□□□ -0.88
COL2A1-201ENST00000337299 MIFP14174 115 aa9.54□□□□□ -0.88
COL2A1-201ENST00000337299 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms