RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RUSC1-AS1Q66K80 236 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 SRRM5B3KS81 715 aa4.47□□□□□ -1.69
CDC42BPA-201ENST00000334218 IGLV3-9A0A075B6K5 115 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 FAM168AQ92567 244 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 CGB7P0DN87 165 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 WFDC13Q8IUB5 93 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 RHPN1-AS1Q9BWJ2 59 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 NOP10Q9NPE3 64 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 TNP2Q05952 138 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGHV4-30-4P0DP06 118 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 LOC110117498A0A087WWA1 95 aa4.46□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV1-9A0A0C4DH69 117 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 FN1P02751 2386 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 SMIM11BQ8TCY0 68 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 DCANP1Q8TF63 244 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 DEFB131AP59861 70 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 CCL18P55774 89 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 GPHB5Q86YW7 130 aa4.45□□□□□ -1.7
CDC42BPA-201ENST00000334218 PATE2Q6UY27 113 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 CHCHD10Q8WYQ3 142 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 SMIM29Q86T20 159 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 PATE4P0C8F1 98 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 Q75L30 129 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 REG3AQ06141 175 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 REG3GQ6UW15 175 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 PIP4P2Q8N4L2 257 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV2-29A2NJV5 120 aaPredicted RBP4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 CYSRT1A8MQ03 144 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 BRD3OSQ6XYD6 125 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 ZNF833PQ6ZTB9 187 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 ZNF843Q8N446 348 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 CGB3P0DN86 165 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 DEFB116Q30KQ4 102 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 C10orf55Q5SWW7 151 aa4.44□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGLV4-60A0A075B6I1 120 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 TRBV6-4A0A1B0GX49 114 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV1-8A0A0C4DH67 115 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 KAAG1Q9UBP8 84 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 NUPR2A6NF83 97 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 RNF223E7ERA6 249 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 CD24P25063 80 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 A0A0J9YWU9 116 aa4.43□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGHV3-35A0A0C4DH35 117 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 C7orf69Q9H7B7 122 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 PHF5AQ7RTV0 110 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 CNFNQ9BYD5 112 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV2D-24A0A075B6R9 120 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 PLA2G1BP04054 148 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 MRGPRG-AS1Q2M3A8 158 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 C1orf134Q5TEV5 83 aa4.42□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 SPINK13Q1W4C9 94 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 LINC00575Q6W349 94 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 LINC00846Q9NV44 126 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 CLPSP04118 112 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 FHL2Q14192 279 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 C9orf66Q5T8R8 295 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 CCDC168Q8NDH2 2452 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 COA5Q86WW8 74 aa4.41□□□□□ -1.7
CDC42BPA-201ENST00000334218 E7EUB6 86 aa4.4□□□□□ -1.7
CDC42BPA-201ENST00000334218 FAM19A1Q7Z5A9 133 aa4.4□□□□□ -1.7
CDC42BPA-201ENST00000334218 Q8IZM0 81 aa4.4□□□□□ -1.7
CDC42BPA-201ENST00000334218 Q8NBF4 154 aa4.4□□□□□ -1.7
CDC42BPA-201ENST00000334218 IGLV4-3A0A075B6K6 122 aa4.4□□□□□ -1.7
CDC42BPA-201ENST00000334218 A0A087X002 238 aa4.4□□□□□ -1.71
CDC42BPA-201ENST00000334218 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
CDC42BPA-201ENST00000334218 RPL39P62891 51 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-201ENST00000334218 MOBPQ13875 183 aa4.4□□□□□ -1.71
CDC42BPA-201ENST00000334218 UNQ9165/PRO28630Q6UXU0 137 aa4.4□□□□□ -1.71
CDC42BPA-201ENST00000334218 ANKHD1Q8IWZ3 2542 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-201ENST00000334218 DEFB130BP0DP73 79 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 DEFB130AP0DP74 79 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 H7BZZ5 65 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 FSHBP01225 129 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 ARTNQ5T4W7 220 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 C11orf72Q8NBR9 251 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 FHL1Q13642 323 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 IGFL2Q6UWQ7 119 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 LY6EQ16553 131 aa4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-201ENST00000334218 PRLHP81277 87 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 Q6ZSV7 163 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 E7EQL1 145 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 MAPKAPK5-AS1Q8N8E1 139 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 COL27A1Q8IZC6 1860 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 Q6ZR03 302 aa4.38□□□□□ -1.71
CDC42BPA-201ENST00000334218 FLVCR1-AS1Q8TAF5 88 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms