RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 CASC10Q5T4H9 136 aa2.7□□□□□ -1.98
KNTC1-201ENST00000333479 SSBP3-AS1Q7Z2R9 100 aa2.7□□□□□ -1.98
KNTC1-201ENST00000333479 SPACA4Q8TDM5 124 aa2.7□□□□□ -1.98
KNTC1-201ENST00000333479 SNRNP200O75643 2136 aaKnown RBP2.7□□□□□ -1.98
KNTC1-201ENST00000333479 MT-ATP8P03928 68 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 SLPIP03973 132 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 SEC61BP60468 96 aaKnown RBP2.69□□□□□ -1.98
KNTC1-201ENST00000333479 CSDC2Q9Y534 153 aaKnown RBP2.69□□□□□ -1.98
KNTC1-201ENST00000333479 PCNX1Q96RV3 2341 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 A0A1B0GW54 56 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 C2CD3Q4AC94 2353 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 E9PLD3 99 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 M0R2T5 61 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 CCKP06307 115 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 IGLC3P0DOY3 106 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 ESRGQ1W209 222 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 ZNF575Q86XF7 245 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 WFDC10BQ8IUB3 73 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 TP53TG3Q9ULZ0 132 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 HIST3H2BBQ8N257 126 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 SCN2AQ99250 2005 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
KNTC1-201ENST00000333479 PTPN13Q12923 2485 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 IGHV6-1A0A0B4J1U7 121 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 C3orf22Q8N5N4 141 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 MED12LQ86YW9 2145 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 LOC100131303A0A0U1RQF7 123 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 PRB4P10163 310 aaPredicted RBP2.68□□□□□ -1.98
KNTC1-201ENST00000333479 BCE1O60756 84 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 X6R8D5 127 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 RTTNQ86VV8 2226 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 FER1L5A0AVI2 2057 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 DNAH10OSP0CZ25 163 aa2.68□□□□□ -1.98
KNTC1-201ENST00000333479 ACYP2P14621 99 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 CDC42SE2Q9NRR3 84 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 TP73-AS1Q9UF72 201 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 A0A087WTM6 91 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 F8W1H4 67 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 COX8AP10176 69 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 COA6Q5JTJ3 125 aaKnown RBP2.67□□□□□ -1.98
KNTC1-201ENST00000333479 FAM167A-AS1Q96KT0 104 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 CCDC88CQ9P219 2028 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 LINC00588Q9Y4M8 146 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 TNRC18O15417 2968 aaPredicted RBP2.67□□□□□ -1.98
KNTC1-201ENST00000333479 IGLV4-3A0A075B6K6 122 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 RPL39P62891 51 aaKnown RBP2.67□□□□□ -1.98
KNTC1-201ENST00000333479 SMCR5Q8TEV8 140 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 TP53AIP1Q9HCN2 124 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 C22orf24Q9Y442 160 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 MDC1Q14676 2089 aaKnown RBP2.67□□□□□ -1.98
KNTC1-201ENST00000333479 A0A1W2PPR1 153 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 Q6ZSA8 131 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 HIGD1BQ9P298 99 aa2.67□□□□□ -1.98
KNTC1-201ENST00000333479 ATP5EP56381 51 aaPredicted RBP2.66□□□□□ -1.98
KNTC1-201ENST00000333479 APLNQ9ULZ1 77 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 IGLV4-60A0A075B6I1 120 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 NDUFV3P56181 108 aaKnown RBP2.66□□□□□ -1.98
KNTC1-201ENST00000333479 LINC00313P59037 77 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 CDKN2A-AS1Q9UH64 79 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 LINC00173Q6ZV60 143 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 LINC00308Q8TCZ7 52 aa2.66□□□□□ -1.98
KNTC1-201ENST00000333479 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.66□□□□□ -1.986e-7■■■■■ 47.3
KNTC1-201ENST00000333479 TEN1Q86WV5 123 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 Q8N814 137 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 PLA2G2DQ9UNK4 145 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 SDK2Q58EX2 2172 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 SHANK1Q9Y566 2161 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 HEATR5BQ9P2D3 2071 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 GVQW2A0A096LPI5 108 aaPredicted RBP2.65□□□□□ -1.98
KNTC1-201ENST00000333479 HIST1H2BJP06899 126 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 HIST1H2BOP23527 126 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 HIST1H2BBP33778 126 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 HIST2H2BEQ16778 126 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 C1orf195Q5TG92 126 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 Q6ZQY7 126 aa2.65□□□□□ -1.98
KNTC1-201ENST00000333479 TRBV7-6A0A0J9YX20 115 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 LINC00575Q6W349 94 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 CELA1Q9UNI1 258 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 GDF5OSQ5U4N7 250 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 CRIP3Q6Q6R5 217 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 TSHBP01222 138 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 ZNF22P17026 224 aaPredicted RBP2.65□□□□□ -1.99
KNTC1-201ENST00000333479 Q8NAQ8 132 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 ZNF462Q96JM2 2506 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 UNQ6190/PRO20217Q6UXQ8 127 aa2.65□□□□□ -1.99
KNTC1-201ENST00000333479 EML5Q05BV3 1969 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 DEFB1P60022 68 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 Q6ZPA2 131 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 SPTBP11277 2137 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 SPINK1P00995 79 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 ETDBQ3ZM63 59 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 CYYR1Q96J86 154 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 MOBPQ13875 183 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 KIF26BQ2KJY2 2108 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 PRRC2AP48634 2157 aaKnown RBP2.64□□□□□ -1.99
KNTC1-201ENST00000333479 ARHGEF17Q96PE2 2063 aaPredicted RBP2.64□□□□□ -1.99
KNTC1-201ENST00000333479 ICE1Q9Y2F5 2266 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 HIST1H2BKO60814 126 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 CHTF8P0CG12 524 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms