RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SPINK6Q6UWN8 80 aa8.45□□□□□ -1.06
GTF3C6-201ENST00000329970 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
GTF3C6-201ENST00000329970 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
GTF3C6-201ENST00000329970 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
GTF3C6-201ENST00000329970 Q6ZRP5 223 aa8.44□□□□□ -1.06
GTF3C6-201ENST00000329970 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 SPAG11BQ08648 103 aa8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 C5orf38Q86SI9 138 aa8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 MRPL35Q9NZE8 188 aaKnown RBP8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 LAMTOR2Q9Y2Q5 125 aa8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 UBR4Q5T4S7 5183 aa8.43□□□□□ -1.06
GTF3C6-201ENST00000329970 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
GTF3C6-201ENST00000329970 GAGE2BQ13066 116 aa8.42□□□□□ -1.06
GTF3C6-201ENST00000329970 A0A0J9YXV3 536 aa8.41□□□□□ -1.06
GTF3C6-201ENST00000329970 REG3GQ6UW15 175 aa8.41□□□□□ -1.06
GTF3C6-201ENST00000329970 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
GTF3C6-201ENST00000329970 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
GTF3C6-201ENST00000329970 TLX1NBP0CAT3 122 aa8.4□□□□□ -1.06
GTF3C6-201ENST00000329970 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
GTF3C6-201ENST00000329970 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
GTF3C6-201ENST00000329970 PRELID3AQ96N28 172 aa8.4□□□□□ -1.06
GTF3C6-201ENST00000329970 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 NDUFA1O15239 70 aa8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 RAB5AP20339 215 aa8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 IMMP2LQ96T52 175 aa8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 OPRPNQ99935 248 aaPredicted RBP8.39□□□□□ -1.07
GTF3C6-201ENST00000329970 A0A087WZ39 114 aa8.38□□□□□ -1.07
GTF3C6-201ENST00000329970 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
GTF3C6-201ENST00000329970 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
GTF3C6-201ENST00000329970 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 TGIF2-C20orf24A0A0A6YYL0 155 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 K7EMI3 77 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 MT-ND4LP03901 98 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 NPSP0C0P6 89 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
GTF3C6-201ENST00000329970 KIAA0087Q14695 138 aa8.36□□□□□ -1.07
GTF3C6-201ENST00000329970 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
GTF3C6-201ENST00000329970 Q8N8P6 123 aa8.36□□□□□ -1.07
GTF3C6-201ENST00000329970 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
GTF3C6-201ENST00000329970 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
GTF3C6-201ENST00000329970 PSORS1C2Q9UIG4 136 aa8.35□□□□□ -1.07
GTF3C6-201ENST00000329970 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 UBE2D1P51668 147 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 RAB14P61106 215 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 ORMDL2Q53FV1 153 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 TEX43Q6ZNM6 134 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 CYSLTR1Q9Y271 337 aa8.34□□□□□ -1.07
GTF3C6-201ENST00000329970 LRP2P98164 4655 aa8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 C2orf66Q6UXQ4 117 aa8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 UNQ6190/PRO20217Q6UXQ8 127 aa8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 PHF5AQ7RTV0 110 aaKnown RBP8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 AMELXQ99217 191 aa8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
GTF3C6-201ENST00000329970 MT-ND6P03923 174 aa8.32□□□□□ -1.08
GTF3C6-201ENST00000329970 Q6ZN92 141 aa8.32□□□□□ -1.08
GTF3C6-201ENST00000329970 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
GTF3C6-201ENST00000329970 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
GTF3C6-201ENST00000329970 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
GTF3C6-201ENST00000329970 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
GTF3C6-201ENST00000329970 G0S2P27469 103 aa8.3□□□□□ -1.08
GTF3C6-201ENST00000329970 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
GTF3C6-201ENST00000329970 CLLU1Q5K131 121 aa8.3□□□□□ -1.08
GTF3C6-201ENST00000329970 VCX2Q9H322 139 aa8.3□□□□□ -1.08
GTF3C6-201ENST00000329970 TRAV9-1A0A075B6T8 112 aa8.29□□□□□ -1.08
GTF3C6-201ENST00000329970 NDUFC2-KCTD14E9PQ53 114 aa8.29□□□□□ -1.08
GTF3C6-201ENST00000329970 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
GTF3C6-201ENST00000329970 ODF1Q14990 250 aa8.29□□□□□ -1.08
GTF3C6-201ENST00000329970 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
GTF3C6-201ENST00000329970 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 SEC11AP67812 179 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 Q8IZM0 81 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 CTDSP1Q9GZU7 261 aa8.28□□□□□ -1.08
GTF3C6-201ENST00000329970 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
GTF3C6-201ENST00000329970 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
GTF3C6-201ENST00000329970 DIRC1Q969H9 104 aa8.27□□□□□ -1.09
GTF3C6-201ENST00000329970 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
GTF3C6-201ENST00000329970 HERVK_113P63121 156 aa8.26□□□□□ -1.09
GTF3C6-201ENST00000329970 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
GTF3C6-201ENST00000329970 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
GTF3C6-201ENST00000329970 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
GTF3C6-201ENST00000329970 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 H0Y9J4 135 aa8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 M0QXV9 152 aa8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 PRSS2P07478 247 aa8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 C9orf129Q5T035 196 aaKnown RBP8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 ZC2HC1BQ5TFG8 222 aa8.25□□□□□ -1.09
GTF3C6-201ENST00000329970 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms