RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 FAM19A3Q7Z5A8 133 aa6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 LINC01560Q8TB33 94 aa6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 DOCK7Q96N67 2140 aa6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 PRRC2AP48634 2157 aaKnown RBP6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 CSPG4Q6UVK1 2322 aa6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 DSCAML1Q8TD84 2053 aa6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 TNCP24821 2201 aa6.72□□□□□ -1.33
NPIPA1-201ENST00000328085 IGLV11-55A0A075B6I3 123 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 TFF1P04155 84 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 RFPL3SP0C7P2 107 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 ADORA2A-AS1P86434 159 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 Q6ZVQ6 151 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 SMR3AQ99954 134 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 RBM12B-AS1Q9P1G2 102 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 ATRQ13535 2644 aa6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.34
NPIPA1-201ENST00000328085 MAP1AP78559 2803 aaPredicted RBP6.7□□□□□ -1.34
NPIPA1-201ENST00000328085 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
NPIPA1-201ENST00000328085 FUSP35637 526 aaKnown RBP eCLIP6.7□□□□□ -1.34
NPIPA1-201ENST00000328085 RMI2Q96E14 147 aa6.7□□□□□ -1.34
NPIPA1-201ENST00000328085 FN1P02751 2386 aaKnown RBP6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 NACAE9PAV3 2078 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 IGHV3-21A0A0B4J1V1 117 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 IGF1P05019 195 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 CTSGP08311 255 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 C6orf223Q8N319 242 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 FAM218AQ96MZ4 157 aa6.69□□□□□ -1.34
NPIPA1-201ENST00000328085 IGHV3-64DA0A0J9YX35 117 aa6.68□□□□□ -1.34
NPIPA1-201ENST00000328085 IGFL4Q6B9Z1 124 aa6.68□□□□□ -1.34
NPIPA1-201ENST00000328085 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
NPIPA1-201ENST00000328085 OPRPNQ99935 248 aaPredicted RBP6.68□□□□□ -1.34
NPIPA1-201ENST00000328085 SEC16AO15027 2179 aa6.68□□□□□ -1.34
NPIPA1-201ENST00000328085 IGLV3-9A0A075B6K5 115 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 PRAC2D3DTV9 90 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 PRYO14603 147 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 IGHV1-2P23083 117 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 Q6ZSV7 163 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 Q6ZTC4 211 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 NPBQ8NG41 125 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 LINC00588Q9Y4M8 146 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 ZGRF1Q86YA3 2104 aa6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 ZNF469Q96JG9 3925 aaPredicted RBP6.67□□□□□ -1.34
NPIPA1-201ENST00000328085 NSD1Q96L73 2696 aaPredicted RBP6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 IGHV3-64A0A075B6Q5 118 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 hDV103S1A0JD37 113 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 M0QY20 66 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 M0R378 163 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 RNASE3P12724 160 aaKnown RBP6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 UBE2AP49459 152 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 APOC4P55056 127 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 C19orf54Q5BKX5 351 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 IGFL3Q6UXB1 125 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
NPIPA1-201ENST00000328085 FLNAP21333 2647 aaKnown RBP6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 VPREB1P12018 145 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 ECSCRQ19T08 205 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 MIR7-3HGQ8N6C7 128 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 UBE2E2Q96LR5 201 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 BPESC1Q9GZL8 116 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
NPIPA1-201ENST00000328085 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 RPL11P62913 178 aaKnown RBP6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 NREPQ16612 68 aa6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 C9orf106Q8NAJ2 232 aa6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 Q9HAA7 133 aa6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 KAAG1Q9UBP8 84 aa6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 ABCA4P78363 2273 aa6.64□□□□□ -1.35
NPIPA1-201ENST00000328085 ADARB2-AS1A8MUL3 147 aa6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 F5H697 171 aa6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 IGHV1-8P0DP01 117 aa6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 LINC01547P58512 204 aaPredicted RBP6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 Q8N6K4 173 aa6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 ESM1Q9NQ30 184 aa6.63□□□□□ -1.35
NPIPA1-201ENST00000328085 LY6G6DO95868 133 aa6.62□□□□□ -1.35
NPIPA1-201ENST00000328085 IGLV1-47P01700 117 aa6.62□□□□□ -1.35
NPIPA1-201ENST00000328085 C9orf66Q5T8R8 295 aa6.62□□□□□ -1.35
NPIPA1-201ENST00000328085 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
NPIPA1-201ENST00000328085 Q9H8V8 135 aa6.62□□□□□ -1.35
NPIPA1-201ENST00000328085 NCR3O14931 201 aa6.61□□□□□ -1.35
NPIPA1-201ENST00000328085 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
NPIPA1-201ENST00000328085 LCA10Q71F78 164 aa6.61□□□□□ -1.35
NPIPA1-201ENST00000328085 TTTY12Q9BZ98 90 aa6.61□□□□□ -1.35
NPIPA1-201ENST00000328085 A0A087WYN8 130 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 PINLYPA6NC86 204 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 LECT2O14960 151 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 DEFB114Q30KQ6 69 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 ZNRD1Q9P1U0 126 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 ZNF580Q9UK33 172 aa6.6□□□□□ -1.35
NPIPA1-201ENST00000328085 A0A087WZ39 114 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms