RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 FANCD2OSQ96PS1 177 aa7.53□□□□□ -1.2
SF3B2-201ENST00000322535 A0A096LNT2 108 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 IGHG2P01859 326 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 Q8N9W7 124 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 LITAFQ99732 161 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 C14orf132Q9NPU4 83 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 C9orf47Q6ZRZ4 202 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 SMR3AQ99954 134 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 HIVEP2P31629 2446 aa7.52□□□□□ -1.21
SF3B2-201ENST00000322535 FN1P02751 2386 aaKnown RBP7.52□□□□□ -1.21
SF3B2-201ENST00000322535 IGKV3-7A0A075B6H7 116 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 TRAV23DV6A0A075B6W5 121 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 IGHV7-81A0A0B4J1V7 117 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 ATP6V0E1O15342 81 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 RNASE4P34096 147 aaKnown RBP7.51□□□□□ -1.21
SF3B2-201ENST00000322535 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 HIVEP1P15822 2718 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 VCYO14598 125 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 MIAQ16674 131 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 TIMM17AQ99595 171 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 MOB4Q9Y3A3 225 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 IGHV4-4A0A075B6R2 117 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 CLPSL1A2RUU4 121 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 IGHV4-31P0DP07 118 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
SF3B2-201ENST00000322535 DEFB112Q30KQ8 113 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 MINOS1Q5TGZ0 78 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 Q6ZRU5 148 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 LINC01356Q8N9X3 169 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 MINOS1-NBL1R4GNA1 71 aa7.51□□□□□ -1.21
SF3B2-201ENST00000322535 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
SF3B2-201ENST00000322535 SUMO4Q6EEV6 95 aa7.5□□□□□ -1.21
SF3B2-201ENST00000322535 Q6JHZ5 121 aa7.5□□□□□ -1.21
SF3B2-201ENST00000322535 Q8N2B8 174 aa7.5□□□□□ -1.21
SF3B2-201ENST00000322535 F8W735 103 aaPredicted RBP7.5□□□□□ -1.21
SF3B2-201ENST00000322535 CTSGP08311 255 aa7.5□□□□□ -1.21
SF3B2-201ENST00000322535 NPBQ8NG41 125 aa7.49□□□□□ -1.21
SF3B2-201ENST00000322535 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
SF3B2-201ENST00000322535 C10orf99Q6UWK7 81 aa7.49□□□□□ -1.21
SF3B2-201ENST00000322535 PRR15Q8IV56 129 aa7.49□□□□□ -1.21
SF3B2-201ENST00000322535 C1orf158Q8N1D5 194 aa7.49□□□□□ -1.21
SF3B2-201ENST00000322535 Q8N6K4 173 aa7.49□□□□□ -1.21
SF3B2-201ENST00000322535 RMI2Q96E14 147 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 MUC4Q99102 2169 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 SORL1Q92673 2214 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 COX7A2LO14548 114 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 PPP1R17O96001 155 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 INAFM2P0DMQ5 153 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
SF3B2-201ENST00000322535 FAM218AQ96MZ4 157 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 Q9UF83 564 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 F8WEM9 126 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
SF3B2-201ENST00000322535 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
SF3B2-201ENST00000322535 C6orf223Q8N319 242 aa7.48□□□□□ -1.21
SF3B2-201ENST00000322535 F6UB75 175 aa7.47□□□□□ -1.21
SF3B2-201ENST00000322535 DSCR9P59020 149 aa7.47□□□□□ -1.21
SF3B2-201ENST00000322535 IGHV3-11P01762 117 aa7.47□□□□□ -1.21
SF3B2-201ENST00000322535 CD28P10747 220 aa7.47□□□□□ -1.21
SF3B2-201ENST00000322535 C5orf56Q8N8D9 126 aa7.47□□□□□ -1.21
SF3B2-201ENST00000322535 MRPL53Q96EL3 112 aaKnown RBP7.47□□□□□ -1.21
SF3B2-201ENST00000322535 TRBV12-3P01733 135 aa7.46□□□□□ -1.21
SF3B2-201ENST00000322535 BAHCC1Q9P281 2608 aa7.46□□□□□ -1.22
SF3B2-201ENST00000322535 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.46□□□□□ -1.22
SF3B2-201ENST00000322535 RBM12B-AS1Q9P1G2 102 aa7.46□□□□□ -1.22
SF3B2-201ENST00000322535 IGLV11-55A0A075B6I3 123 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 TRAV21A0A0B4J279 112 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 C15orf32Q32M92 178 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 RNF5Q99942 180 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 ZFAND3Q9H8U3 227 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 A0A0J9YX75 114 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 IGLV4-3A0A075B6K6 122 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 A0A087WZ39 114 aa7.45□□□□□ -1.22
SF3B2-201ENST00000322535 RNASE3P12724 160 aaKnown RBP7.45□□□□□ -1.22
SF3B2-201ENST00000322535 MRPS36P82909 103 aaKnown RBP7.45□□□□□ -1.22
SF3B2-201ENST00000322535 H3BS24 57 aa7.44□□□□□ -1.22
SF3B2-201ENST00000322535 CLEC19AQ6UXS0 136 aa7.44□□□□□ -1.22
SF3B2-201ENST00000322535 ANK3Q12955 4377 aaKnown RBP7.44□□□□□ -1.22
SF3B2-201ENST00000322535 F8P00451 2351 aa7.44□□□□□ -1.22
SF3B2-201ENST00000322535 IGHV1-58A0A0C4DH39 117 aa7.44□□□□□ -1.22
SF3B2-201ENST00000322535 KLK9Q9UKQ9 250 aa7.44□□□□□ -1.22
SF3B2-201ENST00000322535 PLAC8L1A1L4L8 177 aa7.43□□□□□ -1.22
SF3B2-201ENST00000322535 NCR3O14931 201 aa7.43□□□□□ -1.22
SF3B2-201ENST00000322535 CFHR3Q02985 330 aa7.43□□□□□ -1.22
SF3B2-201ENST00000322535 UBE2E2Q96LR5 201 aa7.43□□□□□ -1.22
SF3B2-201ENST00000322535 LINC00315P59091 139 aa7.43□□□□□ -1.22
SF3B2-201ENST00000322535 C11orf44Q8N8P7 122 aa7.43□□□□□ -1.22
SF3B2-201ENST00000322535 ZFAND2AQ8N6M9 145 aa7.42□□□□□ -1.22
SF3B2-201ENST00000322535 IGHV3-73A0A0B4J1V6 119 aa7.42□□□□□ -1.22
SF3B2-201ENST00000322535 NSD1Q96L73 2696 aaPredicted RBP7.42□□□□□ -1.22
SF3B2-201ENST00000322535 TRBV27A0A0K0K1C4 114 aa7.41□□□□□ -1.22
SF3B2-201ENST00000322535 A6NDX4 124 aa7.41□□□□□ -1.22
SF3B2-201ENST00000322535 ENHOQ6UWT2 76 aa7.41□□□□□ -1.22
SF3B2-201ENST00000322535 C20orf203Q8NBC4 194 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms