RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 UQCRQO14949 82 aa11.21□□□□□ -0.61
VARS2-201ENST00000321897 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
VARS2-201ENST00000321897 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
VARS2-201ENST00000321897 SMR3AQ99954 134 aa11.21□□□□□ -0.61
VARS2-201ENST00000321897 C3orf22Q8N5N4 141 aa11.21□□□□□ -0.62
VARS2-201ENST00000321897 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.62
VARS2-201ENST00000321897 UBR5O95071 2799 aaPredicted RBP11.21□□□□□ -0.62
VARS2-201ENST00000321897 CRYGDP07320 174 aa11.2□□□□□ -0.62
VARS2-201ENST00000321897 RBM3P98179 157 aaKnown RBP11.2□□□□□ -0.62
VARS2-201ENST00000321897 DNAJC30Q96LL9 226 aa11.2□□□□□ -0.62
VARS2-201ENST00000321897 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
VARS2-201ENST00000321897 ADAMTSL4-AS1Q5T5F5 129 aa11.2□□□□□ -0.62
VARS2-201ENST00000321897 CUBNO60494 3623 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 COX7A2LO14548 114 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 C20orf197Q8N268 126 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 MRAPQ8TCY5 172 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 J3QKU1 62 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 Q6YL49 198 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 LST1O00453 97 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 OVOL2Q9BRP0 275 aa11.19□□□□□ -0.62
VARS2-201ENST00000321897 PRB2P02812 416 aaPredicted RBP11.18□□□□□ -0.62
VARS2-201ENST00000321897 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 Q9UF83 564 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 COL27A1Q8IZC6 1860 aaPredicted RBP11.18□□□□□ -0.62
VARS2-201ENST00000321897 TSHBP01222 138 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 MED14OSP0DP75 135 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 GYPEP15421 78 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 LOC100131303A0A0U1RQF7 123 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 KLLNB2CW77 178 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 RNF152Q8N8N0 203 aa11.18□□□□□ -0.62
VARS2-201ENST00000321897 PLA2G2AP14555 144 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 DAD1P61803 113 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 LINC00482Q8N8I6 264 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 A0A087WVE0 104 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 ZNF843Q8N446 348 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 DSCR8Q96T75 97 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 NCR3O14931 201 aa11.17□□□□□ -0.62
VARS2-201ENST00000321897 UTP20O75691 2785 aaKnown RBP11.17□□□□□ -0.62
VARS2-201ENST00000321897 CSMD1Q96PZ7 3565 aa11.16□□□□□ -0.62
VARS2-201ENST00000321897 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
VARS2-201ENST00000321897 GHRHP01286 108 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 ODF3Q96PU9 254 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 ORMDL1Q9P0S3 153 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 K7EQD1 137 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 TIRAPP58753 221 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 WFDC9Q8NEX5 89 aa11.15□□□□□ -0.62
VARS2-201ENST00000321897 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.63
VARS2-201ENST00000321897 SS18Q15532 418 aa11.14□□□□□ -0.63
VARS2-201ENST00000321897 PSMG3-AS1Q96PY0 264 aa11.14□□□□□ -0.63
VARS2-201ENST00000321897 COX7B2Q8TF08 81 aa11.12□□□□□ -0.63
VARS2-201ENST00000321897 C4orf3Q8WVX3 66 aa11.12□□□□□ -0.63
VARS2-201ENST00000321897 DPH3Q96FX2 82 aa11.12□□□□□ -0.63
VARS2-201ENST00000321897 FAM110AQ9BQ89 295 aa11.12□□□□□ -0.63
VARS2-201ENST00000321897 SVEP1Q4LDE5 3571 aa11.11□□□□□ -0.63
VARS2-201ENST00000321897 NF1P21359 2839 aa11.11□□□□□ -0.63
VARS2-201ENST00000321897 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
VARS2-201ENST00000321897 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
VARS2-201ENST00000321897 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
VARS2-201ENST00000321897 Q6ZSN1 163 aa11.1□□□□□ -0.63
VARS2-201ENST00000321897 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
VARS2-201ENST00000321897 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
VARS2-201ENST00000321897 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
VARS2-201ENST00000321897 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
VARS2-201ENST00000321897 Q6Q795 121 aa11.09□□□□□ -0.63
VARS2-201ENST00000321897 COX7CP15954 63 aa11.08□□□□□ -0.64
VARS2-201ENST00000321897 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
VARS2-201ENST00000321897 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
VARS2-201ENST00000321897 ENHOQ6UWT2 76 aa11.08□□□□□ -0.64
VARS2-201ENST00000321897 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
VARS2-201ENST00000321897 ODF3L2Q3SX64 289 aa11.07□□□□□ -0.64
VARS2-201ENST00000321897 C9orf85Q96MD7 179 aa11.07□□□□□ -0.64
VARS2-201ENST00000321897 TRBV6-5A0A0K0K1A5 114 aa11.07□□□□□ -0.64
VARS2-201ENST00000321897 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
VARS2-201ENST00000321897 H0YGX0 51 aa11.06□□□□□ -0.64
VARS2-201ENST00000321897 LINC01006Q8NI28 216 aa11.06□□□□□ -0.64
VARS2-201ENST00000321897 A0A0U1RQV1 116 aa11.06□□□□□ -0.64
VARS2-201ENST00000321897 NHLRC4P0CG21 123 aaPredicted RBP11.05□□□□□ -0.64
VARS2-201ENST00000321897 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
VARS2-201ENST00000321897 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
VARS2-201ENST00000321897 FBN2P35556 2912 aa11.05□□□□□ -0.64
VARS2-201ENST00000321897 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
VARS2-201ENST00000321897 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
VARS2-201ENST00000321897 NDUFA1O15239 70 aa11.04□□□□□ -0.64
VARS2-201ENST00000321897 BRK1Q8WUW1 75 aa11.03□□□□□ -0.64
VARS2-201ENST00000321897 C16orf74Q96GX8 76 aa11.03□□□□□ -0.64
VARS2-201ENST00000321897 SPANXCQ9NY87 97 aa11.03□□□□□ -0.64
VARS2-201ENST00000321897 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
VARS2-201ENST00000321897 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
VARS2-201ENST00000321897 KLK12Q9UKR0 248 aa11.03□□□□□ -0.64
VARS2-201ENST00000321897 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
VARS2-201ENST00000321897 ITPR2Q14571 2701 aa11.02□□□□□ -0.65
VARS2-201ENST00000321897 UBE2D4Q9Y2X8 147 aa11.02□□□□□ -0.65
VARS2-201ENST00000321897 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms